Class information for:
Level 1: PROTEIN FOLDING//PHI VALUE//CONTACT ORDER

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
1071 2771 49.5 86%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 PROTEIN FOLDING Author keyword 70 11% 22% 615
2 PHI VALUE Author keyword 65 77% 2% 44
3 CONTACT ORDER Author keyword 60 80% 1% 37
4 PHI VALUE ANALYSIS Author keyword 42 69% 1% 36
5 FOLDING RATE Author keyword 39 73% 1% 30
6 FOLDING KINETICS Author keyword 38 41% 3% 71
7 FOLDING NUCLEUS Author keyword 35 67% 1% 32
8 NUCLEATION CONDENSATION Author keyword 33 100% 0% 13
9 PHI VALUES Author keyword 32 85% 1% 17
10 TRANSITION STATE ENSEMBLE Author keyword 31 76% 1% 22

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 PROTEIN FOLDING 70 11% 22% 615 Search PROTEIN+FOLDING Search PROTEIN+FOLDING
2 PHI VALUE 65 77% 2% 44 Search PHI+VALUE Search PHI+VALUE
3 CONTACT ORDER 60 80% 1% 37 Search CONTACT+ORDER Search CONTACT+ORDER
4 PHI VALUE ANALYSIS 42 69% 1% 36 Search PHI+VALUE+ANALYSIS Search PHI+VALUE+ANALYSIS
5 FOLDING RATE 39 73% 1% 30 Search FOLDING+RATE Search FOLDING+RATE
6 FOLDING KINETICS 38 41% 3% 71 Search FOLDING+KINETICS Search FOLDING+KINETICS
7 FOLDING NUCLEUS 35 67% 1% 32 Search FOLDING+NUCLEUS Search FOLDING+NUCLEUS
8 NUCLEATION CONDENSATION 33 100% 0% 13 Search NUCLEATION+CONDENSATION Search NUCLEATION+CONDENSATION
9 PHI VALUES 32 85% 1% 17 Search PHI+VALUES Search PHI+VALUES
10 TRANSITION STATE ENSEMBLE 31 76% 1% 22 Search TRANSITION+STATE+ENSEMBLE Search TRANSITION+STATE+ENSEMBLE

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 CONTACT ORDER 341 73% 9% 260
2 CHYMOTRYPSIN INHIBITOR 2 296 63% 11% 299
3 SINGLE DOMAIN PROTEINS 238 76% 6% 166
4 FUNNELS 175 61% 7% 184
5 TRANSITION STATE PLACEMENT 114 95% 1% 38
6 TRANSITION STATE 111 15% 25% 697
7 2 STATE PROTEINS 111 76% 3% 77
8 NUCLEATION CONDENSATION MECHANISM 95 66% 3% 88
9 TRANSITION STATE ENSEMBLE 95 68% 3% 83
10 2 STATE TRANSITION 93 88% 2% 44

Journals


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 FOLDING & DESIGN 5 16% 1% 29

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
The protein folding problem 2008 348 213 49%
The protein folding 'speed limit' 2004 475 137 72%
From Levinthal to pathways to funnels 1997 1345 74 59%
Protein folding thermodynamics and dynamics: Where physics, chemistry, and biology meet 2006 195 238 62%
Coarse-grained models of protein folding: toy models or predictive tools? 2008 133 55 55%
Intermediates: ubiquitous species on folding energy landscapes? 2007 106 65 71%
Is there a unifying mechanism for protein folding? 2003 265 44 70%
Insights from Coarse-Grained Go Models for Protein Folding and Dynamics 2009 90 150 52%
The experimental survey of protein-folding energy landscapes 2005 123 158 84%
The Protein-Folding Problem, 50 Years On 2012 168 61 20%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 THEORET BIOL PHYS 9 10% 2.9% 80
2 CHIM BIOPHYS 6 16% 1.3% 35
3 PROGRAM BIOCHEM STRUCT BIOL 6 21% 0.9% 26
4 MRC PROT ENGN 5 42% 0.4% 10
5 MED COUNCIL PROT ENGN 4 75% 0.1% 3
6 QUANTITAT BIOSCI BERKELEY 4 75% 0.1% 3
7 BIOMOL STRUCT DESIGN PROGRAM 4 22% 0.6% 16
8 GLOBAL STRATEG ANALYT UNIT 3 100% 0.1% 3
9 BIOL TEOR 3 37% 0.3% 7
10 CAMBRIDGE PROT ENGN 3 23% 0.4% 12

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000224346 HP MODEL//STATISTICAL POTENTIALS//PROTEIN STRUCTURE PREDICTION
2 0.0000166569 BETA HAIRPIN//SIDE CHAIN INTERACTIONS//TRP CAGE
3 0.0000154467 MOLTEN GLOBULE//ALPHA LACTALBUMIN//APOMYOGLOBIN
4 0.0000121293 MARKOV STATE MODELS//TRANSITION PATH SAMPLING//TRANSITION PATH THEORY
5 0.0000119174 POLYPROLINE II//RANDOM COIL//COIL LIBRARY
6 0.0000106415 BASE PAIR KINETICS//GNRA TETRALOOPS//RAAA HAIRPIN MOTIF
7 0.0000103723 HYDROGEN EXCHANGE//HYDROGEN DEUTERIUM EXCHANGE//AMIDE HYDROGEN EXCHANGE
8 0.0000103349 BAKER CHEM CHEM BIOL//REPLICA EXCHANGE METHOD//GENERALIZED ENSEMBLE ALGORITHM
9 0.0000097467 DEHYDRON//KINASE TARGETING//ONCOKINOME
10 0.0000095444 STAPHYLOCOCCAL NUCLEASE//THERMODYNAMIC MOLECULAR SWITCH//PROTEIN THERMOSTABILITY