Class information for:
Level 1: GENE SET ANALYSIS//ENRICHMENT ANALYSIS//FUNCT GENOM NODE

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
10732 972 35.0 82%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
1650 6377 BICLUSTERING//PROGRAM TRANSLAT IMMUNOVIROL BIODEF//MAYO VACCINE GRP

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 GENE SET ANALYSIS Author keyword 21 51% 3% 29
2 ENRICHMENT ANALYSIS Author keyword 7 30% 2% 19
3 FUNCT GENOM NODE Address 4 40% 1% 8
4 GENE SET ENRICHMENT Author keyword 3 33% 1% 7
5 REGULATORY IMPACT FACTOR Author keyword 2 67% 0% 2
6 OVER REPRESENTATION ANALYSIS Author keyword 2 50% 0% 3
7 FUNCT GENOM NODE INB Address 2 23% 1% 7
8 GENE SET Author keyword 2 25% 1% 6
9 BIOINFORMAT FUNCT GENOM NODE INB Address 1 100% 0% 2
10 BIOSCI DATA MIN GRP Address 1 50% 0% 2

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 GENE SET ANALYSIS 21 51% 3% 29 Search GENE+SET+ANALYSIS Search GENE+SET+ANALYSIS
2 ENRICHMENT ANALYSIS 7 30% 2% 19 Search ENRICHMENT+ANALYSIS Search ENRICHMENT+ANALYSIS
3 GENE SET ENRICHMENT 3 33% 1% 7 Search GENE+SET+ENRICHMENT Search GENE+SET+ENRICHMENT
4 REGULATORY IMPACT FACTOR 2 67% 0% 2 Search REGULATORY+IMPACT+FACTOR Search REGULATORY+IMPACT+FACTOR
5 OVER REPRESENTATION ANALYSIS 2 50% 0% 3 Search OVER+REPRESENTATION+ANALYSIS Search OVER+REPRESENTATION+ANALYSIS
6 GENE SET 2 25% 1% 6 Search GENE+SET Search GENE+SET
7 DIFFERENTIAL NETWORKING 1 100% 0% 2 Search DIFFERENTIAL+NETWORKING Search DIFFERENTIAL+NETWORKING
8 JAVA GUI APPLICATION 1 100% 0% 2 Search JAVA+GUI+APPLICATION Search JAVA+GUI+APPLICATION
9 LIQUID ASSOCIATION 1 50% 0% 2 Search LIQUID+ASSOCIATION Search LIQUID+ASSOCIATION
10 PATHWAY INFORMATION 1 100% 0% 2 Search PATHWAY+INFORMATION Search PATHWAY+INFORMATION

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 GLOBAL TEST 32 58% 4% 37
2 ENRICHMENT ANALYSIS 18 25% 6% 63
3 ONTOLOGY TERMS 17 57% 2% 20
4 COMPLEX FUNCTIONALITY 17 100% 1% 8
5 GENE SET ENRICHMENT 14 33% 3% 34
6 SET ENRICHMENT 10 34% 3% 25
7 SET ENRICHMENT ANALYSIS 10 18% 5% 50
8 WIDE EXPRESSION PROFILES 7 53% 1% 10
9 DIFFERENTIAL COEXPRESSION 7 53% 1% 9
10 PATHWAY LEVEL ANALYSIS 6 80% 0% 4

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Ten Years of Pathway Analysis: Current Approaches and Outstanding Challenges 2012 184 78 56%
Bioinformatics approaches for the functional interpretation of protein lists: From ontology term enrichment to network analysis 2015 1 156 30%
Methods and approaches in the topology-based analysis of biological pathways 2013 15 49 63%
Enrichment or depletion of a GO category within a class of genes: which test? 2007 178 20 70%
Ontological analysis of gene expression data: current tools, limitations, and open problems 2005 411 24 50%
From 'differential expression' to 'differential networking' - identification of dysfunctional regulatory networks in diseases 2010 90 52 19%
Knowledge-based analysis of proteomics data 2012 13 14 43%
Detecting Differentially Coexpressed Genes from Labeled Expression Data: A Brief Review 2014 0 28 68%
Bioinformatics applications for pathway analysis of microarray data 2008 77 36 19%
Interpreting the gene expression microarray results: a user-based evaluation of 10 bioinformatics tools 2013 0 39 59%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ.
in class
1 FUNCT GENOM NODE 4 40% 0.8% 8
2 FUNCT GENOM NODE INB 2 23% 0.7% 7
3 BIOINFORMAT FUNCT GENOM NODE INB 1 100% 0.2% 2
4 BIOSCI DATA MIN GRP 1 50% 0.2% 2
5 HOLM GRP 1 100% 0.2% 2
6 NIAID OFF TECHNOL INFORMAT SYST 1 100% 0.2% 2
7 UA CANC 1 100% 0.2% 2
8 SNUBI 1 16% 0.6% 6
9 BIOINFORMAT SCI IT PROGRAM 1 40% 0.2% 2
10 TRANSLAT HLTH INFORMAT 1 40% 0.2% 2

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000164258 DIFFERENTIAL GENE EXPRESSION DETECTION//CANCER OUTLIER PROFILE ANALYSIS//BREAST CANC DIAG TREATMENT HENAN
2 0.0000157211 BICLUSTERING//GENE EXPRESSION DATA//GENE EXPRESSION DATA ANALYSIS
3 0.0000145469 PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORK
4 0.0000133474 MICROARRAY IMAGE PROCESSING//GENE FILTERING//MAQC
5 0.0000127869 EDGE BIOMARKER//SIBS NOVO NORDISK TRANSLAT PREDIABET//RESP18
6 0.0000102345 PHILIP MORRIS INT RD//COMPUTAT PL GENOM PROGRAM//SECT COMPUTAT BIOMED
7 0.0000097095 NETWORK INFERENCE//GENE REGULATORY NETWORKS//GENE NETWORK INFERENCE
8 0.0000096534 FALSE DISCOVERY RATE//MULTIPLE TESTING//FAMILYWISE ERROR RATE
9 0.0000077157 JOURNAL OF BIOMEDICAL SEMANTICS//ZFIN//ZEBRAFISH INFORMAT NETWORK
10 0.0000075554 CUERPO NEUROQUIM//NEUROREGENERAT GRP//TEAM ANIM OURCES