Class information for:
Level 1: GENOME ASSEMBLY//VARIANT CALLING//TARGET ENRICHMENT

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
1159 2714 33.6 84%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
1568 6715 NEXT GENERATION SEQUENCING//RNA SEQ//COPY NUMBER VARIATION

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 GENOME ASSEMBLY Author keyword 17 36% 1% 39
2 VARIANT CALLING Author keyword 11 57% 0% 13
3 TARGET ENRICHMENT Author keyword 8 43% 1% 15
4 SIMONS QUANTITAT BIOL Address 8 52% 0% 11
5 GENOME FINISHING Author keyword 6 71% 0% 5
6 EXOME Author keyword 6 18% 1% 30
7 MASSIVELY PARALLEL SEQUENCING Author keyword 5 16% 1% 28
8 WHOLE EXOME SEQUENCING Author keyword 5 11% 1% 38
9 EXOME SEQUENCING Author keyword 4 10% 2% 41
10 PERSONAL GENOME Author keyword 4 67% 0% 4

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 GENOME ASSEMBLY 17 36% 1% 39 Search GENOME+ASSEMBLY Search GENOME+ASSEMBLY
2 VARIANT CALLING 11 57% 0% 13 Search VARIANT+CALLING Search VARIANT+CALLING
3 TARGET ENRICHMENT 8 43% 1% 15 Search TARGET+ENRICHMENT Search TARGET+ENRICHMENT
4 GENOME FINISHING 6 71% 0% 5 Search GENOME+FINISHING Search GENOME+FINISHING
5 EXOME 6 18% 1% 30 Search EXOME Search EXOME
6 MASSIVELY PARALLEL SEQUENCING 5 16% 1% 28 Search MASSIVELY+PARALLEL+SEQUENCING Search MASSIVELY+PARALLEL+SEQUENCING
7 WHOLE EXOME SEQUENCING 5 11% 1% 38 Search WHOLE+EXOME+SEQUENCING Search WHOLE+EXOME+SEQUENCING
8 EXOME SEQUENCING 4 10% 2% 41 Search EXOME+SEQUENCING Search EXOME+SEQUENCING
9 PERSONAL GENOME 4 67% 0% 4 Search PERSONAL+GENOME Search PERSONAL+GENOME
10 SHORT READ ALIGNMENT 4 67% 0% 4 Search SHORT+READ+ALIGNMENT Search SHORT+READ+ALIGNMENT

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 BURROWS WHEELER TRANSFORM 66 45% 4% 112
2 SHORT DNA SEQUENCES 52 63% 2% 52
3 READ ALIGNMENT 46 34% 4% 110
4 SHORT READ ALIGNMENT 45 43% 3% 79
5 EXON CAPTURE 40 79% 1% 26
6 SHORT READ 39 63% 1% 40
7 MILLIONS 34 59% 1% 38
8 EXOME 34 38% 3% 70
9 READS 33 35% 3% 76
10 DE BRUIJN GRAPHS 32 56% 1% 39

Journals

Reviews


Title Publ. year Cit. Active
references		 % act. ref.
to same field
APPLICATIONS OF NEXT-GENERATION SEQUENCING Sequencing technologies - the next generation 2010 1743 91 49%
Solving the molecular diagnostic testing conundrum for Mendelian disorders in the era of next-generation sequencing: single-gene, gene panel, or exome/genome sequencing 2015 6 37 43%
One chromosome, one contig: complete microbial genomes from long-read sequencing and assembly 2015 4 59 54%
Field guide to next-generation DNA sequencers 2011 294 12 75%
Sequencing depth and coverage: key considerations in genomic analyses 2014 56 96 35%
Genotype and SNP calling from next-generation sequencing data 2011 298 50 62%
Toward better understanding of artifacts in variant calling from high-coverage samples 2014 16 39 87%
The Human Gene Mutation Database: building a comprehensive mutation repository for clinical and molecular genetics, diagnostic testing and personalized genomic medicine 2014 101 43 16%
Sequence Artifacts in DNA from Formalin-Fixed Tissues: Causes and Strategies for Minimization 2015 4 50 32%
Exome sequencing as a tool for Mendelian disease gene discovery 2011 466 78 36%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 SIMONS QUANTITAT BIOL 8 52% 0.4% 11
2 HKU BGI BIOINFORMAT ALGORITHMS CORE TECHNOL 4 56% 0.2% 5
3 STANLEY COGNIT GENOM 4 33% 0.4% 10
4 BINA TECHNOL 3 100% 0.1% 3
5 HKU BGI BIOINFORMAT ALGORITHMS 3 100% 0.1% 3
6 GENOM PATHOL SERV 3 60% 0.1% 3
7 NIJMEGEN MOL LIFE SCI GENET METAB DIS 3 60% 0.1% 3
8 HLTH LAW EMERGING TECHNOL 2 67% 0.1% 2
9 IFM BIOINFORMAT SERC SWEDISH E SCI 2 67% 0.1% 2
10 INVEST CANC THER Y 2 67% 0.1% 2

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000209785 MAPPING BY SEQUENCING//RADSEQ//REDUCED REPRESENTATION LIBRARIES
2 0.0000180168 RNA SEQ//DE NOVO ASSEMBLY//TRANSCRIPTOME ASSEMBLY
3 0.0000167807 EPIDEMIOL PATHOPHYSIOL ONCOGEN VIRUS UNIT//LYSSAVIRUS DYNAM HOST AD TAT UNIT//VIRAL DISCOVERY
4 0.0000129853 METAGENOMICS//MICROBIAL GENOM METAGEN PROGRAM//BIOSCI RD
5 0.0000114166 EVOLUT CANC//PETOS PARADOX//TRANSLAT CANC THER EUT
6 0.0000102895 COPY NUMBER VARIATION//CCL3L1//PENNCNV
7 0.0000100808 NSSNP//POLYPHEN//NSSNPS
8 0.0000094746 UNIVARIATE OPTIMIZATION//UNIDIMENSIONAL SEARCH METHOD//INITIAL INTERVAL OF UNCERTAINTY
9 0.0000078350 RARE VARIANTS//GENETIC EPIDEMIOLOGY//RARE VARIANT ANALYSIS
10 0.0000071918 CHIP SEQ//PEAK CALLING//DNASE SEQ