Class information for:
Level 1: CIS MOTIF//ARABIDOPSIS T87 CELL LINE//GENE ATLAS

Basic class information

ID Publications Average number
of references
Avg. shr. active
ref. in WoS
20708 388 46.5 87%



Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)



ID, lev.
above
Publications Label for level above
238 19563 BIOINFORMATICS//BMC BIOINFORMATICS//GENOME RESEARCH

Terms with highest relevance score



Rank Term Type of term Relevance score
(tfidf)
Class's shr.
of term's tot.
occurrences
Shr. of publ.
in class containing
term
Num. of
publ.
in class
1 CIS MOTIF Author keyword 2 67% 1% 2
2 ARABIDOPSIS T87 CELL LINE Author keyword 1 100% 1% 2
3 GENE ATLAS Author keyword 1 50% 1% 2
4 NAA PLANT SOIL NUTR UNIT Address 1 100% 1% 2
5 GABIPD TEAM Address 1 33% 1% 3
6 COEXPRESSION ANALYSIS Author keyword 1 40% 1% 2
7 CO EXPRESSION ANALYSIS Author keyword 1 22% 1% 4
8 GENE CO EXPRESSION NETWORKS Author keyword 1 33% 1% 2
9 BIOCYC Author keyword 1 50% 0% 1
10 BRAIN KOREA WORLD CLASS UNIV PROGRAM 21 Address 1 50% 0% 1

Web of Science journal categories

Author Key Words



Rank Web of Science journal category Relevance score
(tfidf)
Class's shr.
of term's tot.
occurrences
Shr. of publ.
in class containing
term
Num. of
publ.
in class
LCSH search Wikipedia search
1 CIS MOTIF 2 67% 1% 2 Search CIS+MOTIF Search CIS+MOTIF
2 ARABIDOPSIS T87 CELL LINE 1 100% 1% 2 Search ARABIDOPSIS+T87+CELL+LINE Search ARABIDOPSIS+T87+CELL+LINE
3 GENE ATLAS 1 50% 1% 2 Search GENE+ATLAS Search GENE+ATLAS
4 COEXPRESSION ANALYSIS 1 40% 1% 2 Search COEXPRESSION+ANALYSIS Search COEXPRESSION+ANALYSIS
5 CO EXPRESSION ANALYSIS 1 22% 1% 4 Search CO+EXPRESSION+ANALYSIS Search CO+EXPRESSION+ANALYSIS
6 GENE CO EXPRESSION NETWORKS 1 33% 1% 2 Search GENE+CO+EXPRESSION+NETWORKS Search GENE+CO+EXPRESSION+NETWORKS
7 BIOCYC 1 50% 0% 1 Search BIOCYC Search BIOCYC
8 CO EXPRESSION MODULES 1 50% 0% 1 Search CO+EXPRESSION+MODULES Search CO+EXPRESSION+MODULES
9 CONSERVED CO EXPRESSION 1 50% 0% 1 Search CONSERVED+CO+EXPRESSION Search CONSERVED+CO+EXPRESSION
10 DROUGHT INDUCED 1 50% 0% 1 Search DROUGHT+INDUCED Search DROUGHT+INDUCED

Key Words Plus



Rank Web of Science journal category Relevance score
(tfidf)
Class's shr.
of term's tot.
occurrences
Shr. of publ.
in class containing
term
Num. of
publ. in
class
1 FACTOR DATABASE 7 57% 2% 8
2 SATIVA SSP JAPONICA 5 60% 2% 6
3 MODEL DATA ANALYSIS 5 26% 5% 18
4 INFORMATION RESOURCE 4 22% 4% 17
5 ATHAMAP WEB TOOLS 4 75% 1% 3
6 MICROARRAY DATA SETS 4 50% 2% 6
7 PLANT BIOLOGY 4 19% 5% 18
8 ATTED II 3 33% 2% 8
9 COEXPRESSION NETWORKS 3 21% 3% 13
10 HYPOTHESIS GENERATION 3 18% 3% 13

Journals

Reviews



Title Publ. year Cit. Active references % act. ref.
to same field
Towards revealing the functions of all genes in plants 2014 12 90 21%
Network analysis for gene discovery in plant-specialized metabolism 2013 10 76 20%
Gene-expression analysis and network discovery using Genevestigator 2005 162 6 33%
Co-expression and co-responses: within and beyond transcription 2012 6 72 40%
Web Tools for Rice Transcriptome Analyses 2011 4 19 47%
Resources for systems biology in rice 2014 1 39 38%
Web-Queryable Large-Scale Data Sets for Hypothesis Generation in Plant Biology 2009 50 105 21%
Approaches for extracting practical information from gene co-expression networks in plant biology 2007 129 42 24%
Co-expression of cell wall-related genes: new tools and insights 2012 9 55 33%
Transcriptome data modeling for targeted plant metabolic engineering 2013 8 60 18%

Address terms



Rank Address term Relevance score
(tfidf)
Class's shr.
of term's tot.
occurrences
Shr. of publ.
in class containing
term
Num. of
publ.
in class
1 NAA PLANT SOIL NUTR UNIT 1 100% 0.5% 2
2 GABIPD TEAM 1 33% 0.8% 3
3 BRAIN KOREA WORLD CLASS UNIV PROGRAM 21 1 50% 0.3% 1
4 CROP GENOME INFORMAT 1 50% 0.3% 1
5 FO T OURCE CONSERVAT UTILIZAT SOUT 1 50% 0.3% 1
6 GENET CELLULAR DEV BIOL 1 50% 0.3% 1
7 GRP COMPUTAT EVOLUTIONARY BIOL 1 50% 0.3% 1
8 PL PLANT SCI C S 1 50% 0.3% 1
9 STG BASED SERV 1 50% 0.3% 1
10 VIRTUAL REAL PL 1 50% 0.3% 1

Related classes at same level (level 1)



Rank Relatedness score Related classes
1 0.0000193437 RICE GENOME PROGRAM//CROP DESIGN//GENOME IL
2 0.0000173165 DOF TRANSCRIPTION FACTOR//DOF1//DOF PROTEIN
3 0.0000161588 WRKY TRANSCRIPTION FACTOR//WRKY//WRKY PROTEIN
4 0.0000150063 DREB//AP2 ERF//GCC BOX
5 0.0000117831 BIDIRECTIONAL PROMOTER//NEIGHBORING GENES//GENOME NETWORK PROJECT CORE GRPGENOM SCI
6 0.0000117622 METABOLITE ANNOTATION//SCRIPPS METABOL MASS SPE OMETRY//METABOLOMICS
7 0.0000103566 PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORKS//PROTEIN PROTEIN INTERACTION NETWORK
8 0.0000101546 PROGRAM COMPUTAT GENOM//CIFN//PROGRAMA GENOM COMPUTAC
9 0.0000100657 CIRCOS//BIODADOS//ORTHOLOGY
10 0.0000096122 JOURNAL OF BIOMEDICAL SEMANTICS//ZFIN//ZEBRAFISH INFORMAT NETWORK