Class information for:
Level 1: HP MODEL//STATISTICAL POTENTIALS//PROTEIN STRUCTURE PREDICTION

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
4359 1724 37.8 73%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 HP MODEL Author keyword 33 58% 2% 38
2 STATISTICAL POTENTIALS Author keyword 18 52% 1% 25
3 PROTEIN STRUCTURE PREDICTION Author keyword 17 14% 7% 120
4 OFF LATTICE MODEL Author keyword 15 68% 1% 13
5 KNOWLEDGE BASED POTENTIALS Author keyword 14 45% 1% 24
6 LATTICE PROTEINS Author keyword 13 80% 0% 8
7 KNOWLEDGE BASED POTENTIAL Author keyword 10 44% 1% 17
8 THREADING Author keyword 9 19% 3% 44
9 PROTEIN DESIGNABILITY Author keyword 9 83% 0% 5
10 INVERSE FOLDING Author keyword 9 47% 1% 14

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 HP MODEL 33 58% 2% 38 Search HP+MODEL Search HP+MODEL
2 STATISTICAL POTENTIALS 18 52% 1% 25 Search STATISTICAL+POTENTIALS Search STATISTICAL+POTENTIALS
3 PROTEIN STRUCTURE PREDICTION 17 14% 7% 120 Search PROTEIN+STRUCTURE+PREDICTION Search PROTEIN+STRUCTURE+PREDICTION
4 OFF LATTICE MODEL 15 68% 1% 13 Search OFF+LATTICE+MODEL Search OFF+LATTICE+MODEL
5 KNOWLEDGE BASED POTENTIALS 14 45% 1% 24 Search KNOWLEDGE+BASED+POTENTIALS Search KNOWLEDGE+BASED+POTENTIALS
6 LATTICE PROTEINS 13 80% 0% 8 Search LATTICE+PROTEINS Search LATTICE+PROTEINS
7 KNOWLEDGE BASED POTENTIAL 10 44% 1% 17 Search KNOWLEDGE+BASED+POTENTIAL Search KNOWLEDGE+BASED+POTENTIAL
8 THREADING 9 19% 3% 44 Search THREADING Search THREADING
9 PROTEIN DESIGNABILITY 9 83% 0% 5 Search PROTEIN+DESIGNABILITY Search PROTEIN+DESIGNABILITY
10 INVERSE FOLDING 9 47% 1% 14 Search INVERSE+FOLDING Search INVERSE+FOLDING

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 QUASI CHEMICAL APPROXIMATION 56 64% 3% 54
2 KNOWLEDGE BASED POTENTIALS 38 47% 3% 59
3 ENERGY FUNCTIONS 34 28% 6% 104
4 CONTACT ENERGIES 31 66% 2% 29
5 HP MODEL 27 63% 2% 27
6 MEAN FORCE 26 15% 9% 158
7 DESIGNABILITY 25 71% 1% 20
8 STRUCTURE SELECTION 23 38% 3% 48
9 CONTACT POTENTIALS 22 81% 1% 13
10 GAS REFERENCE STATE 20 52% 2% 28

Journals


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 FOLDING & DESIGN 3 12% 1% 22

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Protein Dynamism and Evolvability 2009 293 44 14%
Effective energy functions for protein structure prediction 2000 238 67 49%
In quest of an empirical potential for protein structure prediction 2006 67 42 43%
Statistical potentials for fold assessment 2002 142 99 61%
Inter-residue interactions in protein folding and stability 2004 152 152 30%
Biophysics of protein evolution and evolutionary protein biophysics 2014 10 416 17%
Ab initio protein structure prediction: Progress and prospects 2001 132 72 42%
Reduced models of proteins and their applications 2004 86 275 44%
Heteropolymer freezing and design: Towards physical models of protein folding 2000 185 140 39%
The structure of protein evolution and the evolution of protein structure 2008 37 76 41%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ.
in class
1 COMPUTAT PROTEOM BIOPHYS 8 60% 0.5% 9
2 GSIT 2 50% 0.2% 3
3 LAURENCE H BAKER BIOINFORMAT BIOL STAT 2 22% 0.4% 7
4 FIS TEOR LICADA 1 100% 0.1% 2
5 OID SCI BIOMAT 1 50% 0.1% 2
6 PHYS ENGN TANDOGAN 1 100% 0.1% 2
7 THEORET BIOINFORMAT GRP 1 100% 0.1% 2
8 LH BAKER BIOINFORMAT BIOL STAT 1 13% 0.4% 7
9 MOL STRUCT SECT 1 17% 0.3% 5
10 VBI 1 25% 0.2% 3

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000224346 PROTEIN FOLDING//PHI VALUE//CONTACT ORDER
2 0.0000186413 PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP
3 0.0000178455 SECONDARY STRUCTURE PREDICTION//PROTEIN SECONDARY STRUCTURE PREDICTION//COMPOUND PYRAMID MODEL
4 0.0000171611 COMPUTATIONAL PROTEIN DESIGN//DEAD END ELIMINATION//COMPUTATIONAL ENZYME DESIGN
5 0.0000154812 BAKER CHEM CHEM BIOL//REPLICA EXCHANGE METHOD//GENERALIZED ENSEMBLE ALGORITHM
6 0.0000150818 BIOINFORMAT TELEMED//HYDROPHOBICITY DEFICIENCY//HELIX INTERACTIONS
7 0.0000134143 LOOP PREDICTION//LOOP MODELING//STEPWISE FOLDING
8 0.0000120209 CORRELATED MUTATIONS//CONTACT PREDICTION//CONTACT MAP PREDICTION
9 0.0000085544 STAPHYLOCOCCAL NUCLEASE//THERMODYNAMIC MOLECULAR SWITCH//PROTEIN THERMOSTABILITY
10 0.0000081699 PINNING MODELS//HARRIS CRITERION//PINNING MODEL