Class information for:
Level 1: POISSON BOLTZMANN EQUATION//POISSON BOLTZMANN//BIOMOLECULAR ELECTROSTATICS

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
6076 1467 52.0 75%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
42 31225 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//PROTEIN FOLDING

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 POISSON BOLTZMANN EQUATION Author keyword 21 24% 5% 77
2 POISSON BOLTZMANN Author keyword 17 28% 3% 51
3 BIOMOLECULAR ELECTROSTATICS Author keyword 14 100% 0% 7
4 ELECTROSTATICS Author keyword 12 10% 8% 112
5 CONTINUUM ELECTROSTATICS Author keyword 11 29% 2% 33
6 GENERALIZED BORN Author keyword 11 40% 1% 21
7 PROTEIN ELECTROSTATICS Author keyword 11 34% 2% 26
8 IMPLICIT SOLVENT Author keyword 10 31% 2% 26
9 PKA CALCULATIONS Author keyword 9 48% 1% 14
10 PROTEIN IONIZATION Author keyword 9 83% 0% 5

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 POISSON BOLTZMANN EQUATION 21 24% 5% 77 Search POISSON+BOLTZMANN+EQUATION Search POISSON+BOLTZMANN+EQUATION
2 POISSON BOLTZMANN 17 28% 3% 51 Search POISSON+BOLTZMANN Search POISSON+BOLTZMANN
3 BIOMOLECULAR ELECTROSTATICS 14 100% 0% 7 Search BIOMOLECULAR+ELECTROSTATICS Search BIOMOLECULAR+ELECTROSTATICS
4 ELECTROSTATICS 12 10% 8% 112 Search ELECTROSTATICS Search ELECTROSTATICS
5 CONTINUUM ELECTROSTATICS 11 29% 2% 33 Search CONTINUUM+ELECTROSTATICS Search CONTINUUM+ELECTROSTATICS
6 GENERALIZED BORN 11 40% 1% 21 Search GENERALIZED+BORN Search GENERALIZED+BORN
7 PROTEIN ELECTROSTATICS 11 34% 2% 26 Search PROTEIN+ELECTROSTATICS Search PROTEIN+ELECTROSTATICS
8 IMPLICIT SOLVENT 10 31% 2% 26 Search IMPLICIT+SOLVENT Search IMPLICIT+SOLVENT
9 PKA CALCULATIONS 9 48% 1% 14 Search PKA+CALCULATIONS Search PKA+CALCULATIONS
10 PROTEIN IONIZATION 9 83% 0% 5 Search PROTEIN+IONIZATION Search PROTEIN+IONIZATION

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 IONIZABLE GROUPS 95 46% 11% 155
2 POISSON BOLTZMANN EQUATION 83 27% 18% 268
3 CONTINUUM ELECTROSTATIC MODEL 64 69% 4% 55
4 IMPLICIT SOLVENT MODELS 47 49% 5% 70
5 MULTIPLE SITE TITRATION 47 69% 3% 40
6 BIOMOLECULAR ELECTROSTATICS 35 73% 2% 27
7 GENERALIZED BORN MODEL 32 29% 6% 95
8 CONTINUUM ELECTROSTATICS 28 35% 4% 64
9 PH MOLECULAR DYNAMICS 26 55% 2% 33
10 IONIZATION EQUILIBRIA 26 54% 2% 33

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Very fast empirical prediction and rationalization of protein pK(a) values 2005 860 98 36%
CLASSICAL ELECTROSTATICS IN BIOLOGY AND CHEMISTRY 1995 1914 85 45%
Recent advances in implicit solvent-based methods for biomolecular simulations 2008 157 62 69%
Generalized born models of macromolecular solvation effects 2000 665 60 60%
Progress in the prediction of pK(a) values in proteins 2011 46 110 86%
MCCE2: Improving Protein pK(a) Calculations with Extensive Side Chain Rotamer Sampling 2009 67 104 60%
The pK(a) Cooperative: A collaborative effort to advance structure-based calculations of pK(a) values and electrostatic effects in proteins 2011 30 62 90%
Recent progress in numerical methods for the Poisson-Boltzmann equation in biophysical applications 2008 106 117 55%
Balancing solvation and intramolecular interactions: Toward a consistent generalized born force field 2006 183 89 40%
Improving implicit solvent simulations: a Poisson-centric view 2005 193 75 61%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ.
in class
1 PHYS J 419 4 75% 0.2% 3
2 JIUYUAN MOL DESIGN 3 100% 0.2% 3
3 BIOLUMR7654 2 67% 0.1% 2
4 SCI COMPUTAT GRP 2 67% 0.1% 2
5 TPC6 2 67% 0.1% 2
6 BEIDA JIUYUAN MOL DESIGN 2 50% 0.2% 3
7 MODELISAT SYST MOL COMPLEXES 2 43% 0.2% 3
8 COMPUTAT STAT ANALYT 2 33% 0.3% 4
9 COMP SCI PHYS 1 38% 0.2% 3
10 CHEM PHYS MAT PHYS PROGRAM 1 100% 0.1% 2

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000195421 ENVIRONM IND CHEM//ONE STEP PERTURBATION//SAMPL4
2 0.0000152288 ELECTROSTATIC RATE ENHANCEMENT//ELECTROSTATIC STEERING//WEIGHTED ENSEMBLE BROWNIAN DYNAMICS
3 0.0000129471 EWALD METHODS//EWALD SUM//CUTOFF METHOD
4 0.0000123117 POLARIZABLE CONTINUUM MODEL//NONEQUILIBRIUM SOLVATION//SOLVATION ANALYSIS
5 0.0000120451 VORONOI DIAGRAM//VORONOI DIAGRAM OF SPHERES//BETA SHAPE
6 0.0000112861 STAPHYLOCOCCAL NUCLEASE//THERMODYNAMIC MOLECULAR SWITCH//PROTEIN THERMOSTABILITY
7 0.0000080211 COMPUTATIONAL PROTEIN DESIGN//DEAD END ELIMINATION//COMPUTATIONAL ENZYME DESIGN
8 0.0000079709 PROTEIN HYDRATION//INTERNAL SOLVENT//SOLVENT MODELING
9 0.0000076022 ION SIZE EFFECTS//ELE ODE PROC//MODIFIED POISSON BOLTZMANN
10 0.0000067462 DIPARTIMENTO SCI BIOL AMBIENTALI//CAVITY CREATION//WORK OF CAVITY CREATION