Class information for:
Level 1: MULTIPLE SEQUENCE ALIGNMENT//T COFFEE//STATISTICAL ALIGNMENT

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
6346 1431 30.2 67%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 2)


ID, lev.
above		 Publications Label for level above
238 19563 BIOINFORMATICS//BMC BIOINFORMATICS//GENOME RESEARCH

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 MULTIPLE SEQUENCE ALIGNMENT Author keyword 33 27% 7% 106
2 T COFFEE Author keyword 21 90% 1% 9
3 STATISTICAL ALIGNMENT Author keyword 18 83% 1% 10
4 SPACED SEEDS Author keyword 15 73% 1% 11
5 SEQUENCE ALIGNMENT Author keyword 10 11% 6% 81
6 INSERTION DELETION MODEL Author keyword 6 80% 0% 4
7 INTERDISCIPLINARY STUDIES STRUCT FORMAT Address 6 71% 0% 5
8 WHOLE GENOME ALIGNMENTS Author keyword 6 100% 0% 4
9 ALIGNMENT UNCERTAINTY Author keyword 4 75% 0% 3
10 DEP LENGUAJES CIENCIAS COMPUTAC Address 4 75% 0% 3

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 MULTIPLE SEQUENCE ALIGNMENT 33 27% 7% 106 Search MULTIPLE+SEQUENCE+ALIGNMENT Search MULTIPLE+SEQUENCE+ALIGNMENT
2 T COFFEE 21 90% 1% 9 Search T+COFFEE Search T+COFFEE
3 STATISTICAL ALIGNMENT 18 83% 1% 10 Search STATISTICAL+ALIGNMENT Search STATISTICAL+ALIGNMENT
4 SPACED SEEDS 15 73% 1% 11 Search SPACED+SEEDS Search SPACED+SEEDS
5 SEQUENCE ALIGNMENT 10 11% 6% 81 Search SEQUENCE+ALIGNMENT Search SEQUENCE+ALIGNMENT
6 INSERTION DELETION MODEL 6 80% 0% 4 Search INSERTION+DELETION+MODEL Search INSERTION+DELETION+MODEL
7 WHOLE GENOME ALIGNMENTS 6 100% 0% 4 Search WHOLE+GENOME+ALIGNMENTS Search WHOLE+GENOME+ALIGNMENTS
8 ALIGNMENT UNCERTAINTY 4 75% 0% 3 Search ALIGNMENT+UNCERTAINTY Search ALIGNMENT+UNCERTAINTY
9 PAIR HIDDEN MARKOV MODELS 4 75% 0% 3 Search PAIR+HIDDEN+MARKOV+MODELS Search PAIR+HIDDEN+MARKOV+MODELS
10 SUBSTITUTION SCORE MATRICES 4 75% 0% 3 Search SUBSTITUTION+SCORE+MATRICES Search SUBSTITUTION+SCORE+MATRICES

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 MAXIMUM LIKELIHOOD ALIGNMENT 28 69% 2% 24
2 DIALIGN 25 65% 2% 24
3 SPACED SEEDS 21 61% 2% 23
4 STATISTICAL ALIGNMENT 18 89% 1% 8
5 JOINT BAYESIAN ESTIMATION 17 75% 1% 12
6 HOMOLOGY SEARCH 15 42% 2% 28
7 SP SCORE 15 82% 1% 9
8 LINEAR SPACE 15 34% 3% 37
9 STATISTICAL MULTIPLE ALIGNMENT 15 88% 0% 7
10 BALIBASE 14 59% 1% 16

Journals

Reviews


Title Publ. year Cit. Active references % act. ref.
to same field
Recent developments in the MAFFT multiple sequence alignment program 2008 1326 101 60%
Multiple sequence alignment 2006 116 35 66%
Multiple sequence alignment for phylogenetic purposes 2006 68 316 49%
Upcoming challenges for multiple sequence alignment methods in the high-throughput era 2009 64 59 64%
Multiple sequence alignments 2005 47 40 73%
Multiple sequence alignment: In pursuit of homologous DNA positions 2007 57 88 44%
PROTEIN MULTIPLE SEQUENCE ALIGNMENT AND FLEXIBLE PATTERN-MATCHING 1990 153 18 67%
Quality assessment of multiple alignment programs 2002 89 14 71%
Multiple protein sequence alignment 2008 24 42 64%
Comparison of genomic DNA sequences: solved and unsolved problems 2001 74 51 43%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ.
in class
1 INTERDISCIPLINARY STUDIES STRUCT FORMAT 6 71% 0.3% 5
2 DEP LENGUAJES CIENCIAS COMPUTAC 4 75% 0.2% 3
3 COMPARAT BIOINFORMAT GRP 3 57% 0.3% 4
4 INFORMAT INTERDISZIPLINA 2 67% 0.1% 2
5 EDUC TECHNOL COMP 1 100% 0.1% 2
6 GENET BIOL MOL CELLULAIRE BIOL GEN 1 50% 0.1% 2
7 HUMAN GENET IGH 1 50% 0.1% 2
8 STRATEG TRAINING PROGRAM BIOINFORMAT 1 100% 0.1% 2
9 DEP ESTADIST 1 30% 0.2% 3
10 UR888 1 23% 0.2% 3

Related classes at same level (level 1)


Rank Relatedness score Related classes
1 0.0000164965 PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP
2 0.0000138177 LONGEST COMMON SUBSEQUENCE//CONSTRAINED LONGEST COMMON SUBSEQUENCE//SHORTEST COMMON SUPERSTRING
3 0.0000111350 IROQUOIS//CONSERVED NONCODING ELEMENTS//ENERGY ENVIRONM BIOL COMP
4 0.0000104762 GENE PREDICTION//GENE FINDING//GENE RECOGNITION
5 0.0000103878 CIRCOS//BIODADOS//ORTHOLOGY
6 0.0000100702 CODON MODEL//HETEROTACHY//PHYLOGENETIC INVARIANTS
7 0.0000098949 GENOME REARRANGEMENTS//SORTING BY REVERSALS//BREAKPOINT GRAPH
8 0.0000092117 AMBIGRAM//DESK TOP MOLECULAR MODELING//PARTIAL DIGEST
9 0.0000077588 K MAXIMUM SUMS PROBLEM//MAXIMUM SUM PROBLEM//MAXIMUM SUM SEGMENT
10 0.0000072414 EMBL OUTSTN//PROT INFORMAT OURCE//HLTH SCI TECHNOL ICIR