Class information for:
Level 2: NEXT GENERATION SEQUENCING//RNA SEQ//COPY NUMBER VARIATION

Basic class information
ID Publications Average number
of references		 Avg. shr. active
ref. in WoS
1568 6715 37.4 86%


Bar chart of Publication_year

Last years might be incomplete

Classes in level above (level 3)


ID, lev.
above		 Publications Label for level above
159 56907 BIOINFORMATICS//BMC BIOINFORMATICS//MATHEMATICAL & COMPUTATIONAL BIOLOGY

Classes in level below (level 1)


ID, lev. below Publications Label for level below
1159 2714 GENOME ASSEMBLY//VARIANT CALLING//TARGET ENRICHMENT
5163 1594 COPY NUMBER VARIATION//CCL3L1//PENNCNV
7698 1259 RNA SEQ//DE NOVO ASSEMBLY//TRANSCRIPTOME ASSEMBLY
16697 576 SPLICED LEADER//TRANS SPLICING//CIRCULAR RNA
21583 356 EPIDEMIOL PATHOPHYSIOL ONCOGEN VIRUS UNIT//LYSSAVIRUS DYNAM HOST AD TAT UNIT//VIRAL DISCOVERY
26161 216 MAPPING BY SEQUENCING//RADSEQ//REDUCED REPRESENTATION LIBRARIES

Terms with highest relevance score


Rank Term Type of term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 NEXT GENERATION SEQUENCING Author keyword 75 15% 7% 449
2 RNA SEQ Author keyword 50 18% 4% 251
3 COPY NUMBER VARIATION Author keyword 34 21% 2% 145
4 DE NOVO ASSEMBLY Author keyword 30 41% 1% 56
5 SPLICED LEADER Author keyword 21 46% 0% 33
6 TRANS SPLICING Author keyword 20 28% 1% 61
7 GENOME ASSEMBLY Author keyword 20 38% 1% 41
8 CCL3L1 Author keyword 19 76% 0% 13
9 VARIANT CALLING Author keyword 16 65% 0% 15
10 PENNCNV Author keyword 13 80% 0% 8

Web of Science journal categories

Author Key Words


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class		 LCSH search Wikipedia search
1 NEXT GENERATION SEQUENCING 75 15% 7% 449 Search NEXT+GENERATION+SEQUENCING Search NEXT+GENERATION+SEQUENCING
2 RNA SEQ 50 18% 4% 251 Search RNA+SEQ Search RNA+SEQ
3 COPY NUMBER VARIATION 34 21% 2% 145 Search COPY+NUMBER+VARIATION Search COPY+NUMBER+VARIATION
4 DE NOVO ASSEMBLY 30 41% 1% 56 Search DE+NOVO+ASSEMBLY Search DE+NOVO+ASSEMBLY
5 SPLICED LEADER 21 46% 0% 33 Search SPLICED+LEADER Search SPLICED+LEADER
6 TRANS SPLICING 20 28% 1% 61 Search TRANS+SPLICING Search TRANS+SPLICING
7 GENOME ASSEMBLY 20 38% 1% 41 Search GENOME+ASSEMBLY Search GENOME+ASSEMBLY
8 CCL3L1 19 76% 0% 13 Search CCL3L1 Search CCL3L1
9 VARIANT CALLING 16 65% 0% 15 Search VARIANT+CALLING Search VARIANT+CALLING
10 PENNCNV 13 80% 0% 8 Search PENNCNV Search PENNCNV

Key Words Plus


Rank Web of Science journal category Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 STRUCTURAL VARIATION 218 40% 6% 428
2 ARRAY CGH DATA 176 66% 2% 163
3 READS 88 53% 2% 115
4 BURROWS WHEELER TRANSFORM 86 50% 2% 125
5 READ ALIGNMENT 82 44% 2% 141
6 SHORT DNA SEQUENCES 71 71% 1% 58
7 SHORT READ ALIGNMENT 68 51% 1% 94
8 SEGMENTAL DUPLICATIONS 67 30% 3% 192
9 COPY NUMBER VARIATION 66 19% 5% 314
10 CIRCULAR BINARY SEGMENTATION 61 59% 1% 68

Journals

Reviews


Title Publ. year Cit. Active
references		 % act. ref.
to same field
APPLICATIONS OF NEXT-GENERATION SEQUENCING Sequencing technologies - the next generation 2010 1743 91 59%
RNA-Seq: a revolutionary tool for transcriptomics 2009 2552 36 44%
Sequencing depth and coverage: key considerations in genomic analyses 2014 56 96 51%
Field guide to next-generation DNA sequencers 2011 294 12 92%
Detecting and characterizing circular RNAs 2014 39 48 58%
Next-generation transcriptome assembly 2011 285 66 76%
Genome-wide genetic marker discovery and genotyping using next-generation sequencing 2011 445 73 51%
Genotype and SNP calling from next-generation sequencing data 2011 298 50 68%
Repetitive DNA and next-generation sequencing: computational challenges and solutions 2012 153 72 72%
Solving the molecular diagnostic testing conundrum for Mendelian disorders in the era of next-generation sequencing: single-gene, gene panel, or exome/genome sequencing 2015 6 37 43%

Address terms


Rank Address term Relevance score
(tfidf)		 Class's shr.
of term's tot.
occurrences		 Shr. of publ.
in class containing
term		 Num. of
publ. in
class
1 SIMONS QUANTITAT BIOL 10 57% 0.2% 12
2 HKU BGI BIOINFORMAT ALGORITHMS CORE TECHNOL 7 67% 0.1% 6
3 STANLEY COGNIT GENOM 5 37% 0.2% 11
4 PROGRAM COMPUTAT BIOL BIOINFORMAT 5 12% 0.6% 38
5 DIAGNOST GENET UNIT 4 38% 0.1% 8
6 INTEGRATED GENOME POLYMORPHISM 4 27% 0.2% 12
7 SHANDONG PROV ANIM DIS CONTROL BREEDING 4 46% 0.1% 6
8 HLTH SOLUT GRP 3 43% 0.1% 6
9 BINA TECHNOL 3 100% 0.0% 3
10 CHAIR BIOINFORMAT GRP 3 100% 0.0% 3

Related classes at same level (level 2)


Rank Relatedness score Related classes
1 0.0000017956 GEMININ//DNA REPLICATION//CDC6
2 0.0000015818 REFERENCE GENES//REFERENCE GENE//GENORM
3 0.0000015541 GENETIC EPIDEMIOLOGY//GENOMIC SELECTION//BMC GENETICS
4 0.0000014844 BICLUSTERING//PROGRAM TRANSLAT IMMUNOVIROL BIODEF//MAYO VACCINE GRP
5 0.0000014178 BIOINFORMATICS//BMC BIOINFORMATICS//GENOME RESEARCH
6 0.0000014158 SEQUENCING BY HYBRIDIZATION//MUTATION DETECTION//TILLING
7 0.0000012609 CHROMATIN SUPRAORGANIZATION//ZNF703//NUCLEAR PHENOTYPES
8 0.0000009193 LANDSCAPE GENETICS//INBREEDING DEPRESSION//COALESCENT
9 0.0000008489 HUMAN ENDOGENOUS RETROVIRUS//ADAR//ENDOGENOUS RETROVIRUS
10 0.0000008430 WOLF HIRSCHHORN SYNDROME//HOLOPROSENCEPHALY//ANNALES DE GENETIQUE