Class information for:
Level 1: DING PROTEIN//PHO REGULON//PHOSPHATE BINDING PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
22457 380 37.5 69%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
804 2             JOURNAL OF BACTERIOLOGY//PHOSPHOTRANSFERASE SYSTEM//PERIPLASMIC BINDING PROTEIN 12049
22457 1                   DING PROTEIN//PHO REGULON//PHOSPHATE BINDING PROTEIN 380

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DING PROTEIN authKW 2008886 7% 100% 25
2 PHO REGULON authKW 573942 5% 36% 20
3 PHOSPHATE BINDING PROTEIN authKW 342558 2% 47% 9
4 PHOU authKW 286981 1% 71% 5
5 PST OPERON authKW 286981 1% 71% 5
6 HUMAN PHOSPHATE BINDING PROTEIN authKW 251107 1% 63% 5
7 PST SYSTEM authKW 251107 1% 63% 5
8 HPBP authKW 241066 1% 100% 3
9 PHOSPHATE REGULON authKW 214278 1% 67% 4
10 P27SJ authKW 160711 1% 100% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 5676 51% 0% 193
2 Biochemistry & Molecular Biology 699 37% 0% 142
3 Genetics & Heredity 189 11% 0% 40
4 Biophysics 117 7% 0% 28
5 Biotechnology & Applied Microbiology 75 7% 0% 28
6 Biochemical Research Methods 42 4% 0% 17
7 Cell Biology 22 6% 0% 23
8 Crystallography 15 2% 0% 9
9 Virology 4 1% 0% 5
10 Immunology 3 3% 0% 13

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ST LUKES ROOSEVELT HLTH SCI 154524 1% 38% 5
2 ARC LEGUME 80355 0% 100% 1
3 C SMH 80355 0% 100% 1
4 CRISTALLISAT MODELISAT MAT MINERAUX BIOL 80355 0% 100% 1
5 CRYSTALLOGR H MODELISAT MAT MINERAUX BIO 80355 0% 100% 1
6 GRP 11 1 80355 0% 100% 1
7 OTASGO MED SCI 80355 0% 100% 1
8 PROTEOM NETWORK RIO DE JANEIRO 80355 0% 100% 1
9 UMR CNRS 7228 80355 0% 100% 1
10 URMITE UMR CNRS IRD 6236 60262 1% 25% 3

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 21517 25% 0% 94
2 MOLECULAR AND GENERAL GENETICS 4265 4% 0% 16
3 MOLECULAR ORAL MICROBIOLOGY 1257 1% 1% 2
4 CURRENT MICROBIOLOGY 1114 2% 0% 9
5 FEMS MICROBIOLOGY LETTERS 838 3% 0% 13
6 MOLECULAR MICROBIOLOGY 802 3% 0% 11
7 CANADIAN JOURNAL OF BIOCHEMISTRY 696 1% 0% 2
8 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 650 1% 0% 5
9 INNATE IMMUNITY 625 1% 0% 2
10 JOURNAL OF MOLECULAR BIOLOGY 564 3% 0% 13

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DING PROTEIN 2008886 7% 100% 25 Search DING+PROTEIN Search DING+PROTEIN
2 PHO REGULON 573942 5% 36% 20 Search PHO+REGULON Search PHO+REGULON
3 PHOSPHATE BINDING PROTEIN 342558 2% 47% 9 Search PHOSPHATE+BINDING+PROTEIN Search PHOSPHATE+BINDING+PROTEIN
4 PHOU 286981 1% 71% 5 Search PHOU Search PHOU
5 PST OPERON 286981 1% 71% 5 Search PST+OPERON Search PST+OPERON
6 HUMAN PHOSPHATE BINDING PROTEIN 251107 1% 63% 5 Search HUMAN+PHOSPHATE+BINDING+PROTEIN Search HUMAN+PHOSPHATE+BINDING+PROTEIN
7 PST SYSTEM 251107 1% 63% 5 Search PST+SYSTEM Search PST+SYSTEM
8 HPBP 241066 1% 100% 3 Search HPBP Search HPBP
9 PHOSPHATE REGULON 214278 1% 67% 4 Search PHOSPHATE+REGULON Search PHOSPHATE+REGULON
10 P27SJ 160711 1% 100% 2 Search P27SJ Search P27SJ

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 ELIAS, M , LIEBSCHNER, D , GOTTHARD, G , CHABRIERE, E , (2011) STRUCTURAL INSIGHTS AND AB INITIO SEQUENCING WITHIN THE DING PROTEINS FAMILY.JOURNAL OF SYNCHROTRON RADIATION. VOL. 18. ISSUE . P. 45-49 31 84% 2
2 BRITO-ARGAEZ, L , TAMAYO-SANSORES, JA , MADERA-PINA, D , GARCIA-VILLALOBOS, FJ , MOO-PUC, RE , KU-GONZALEZ, A , VILLANUEVA, MA , ISLAS-FLORES, I , (2016) BIOCHEMICAL CHARACTERIZATION AND IMMUNOLOCALIZATION STUDIES OF A CAPSICUM CHINENSE JACQ. PROTEIN FRACTION CONTAINING DING PROTEINS AND ANTI-MICROBIAL ACTIVITY.PLANT PHYSIOLOGY AND BIOCHEMISTRY. VOL. 109. ISSUE . P. 502 -514 27 66% 0
3 CHABRIERE, E , ELIAS, M , HIBLOT, J , DJEGHADER, A , SCHWARTZ, C , ROHR, O , MASSON, P , (2012) DING PROTEINS, THEIR BIOCHEMICAL AND STRUCTURAL PROPERTIES, AND THEIR ABILITY TO INHIBIT HIV-1 REPLICATION.BULLETIN DE L ACADEMIE NATIONALE DE MEDECINE. VOL. 196. ISSUE 3. P. 693-703 23 79% 0
4 SACHDEVA, R , DARBINIAN, N , KHALILI, K , AMINI, S , GONZALEZ, D , DJEGHADER, A , CHABRIERE, E , SUH, A , SCOTT, K , SIMM, M , (2013) DING PROTEINS FROM PHYLOGENETICALLY DIFFERENT SPECIES SHARE HIGH DEGREES OF SEQUENCE AND STRUCTURE HOMOLOGY AND BLOCK TRANSCRIPTION OF HIV-1 LTR PROMOTER.PLOS ONE. VOL. 8. ISSUE 8. P. - 29 60% 1
5 COLLOMBET, JM , ELIAS, M , GOTTHARD, G , FOUR, E , RENAULT, F , JOFFRE, A , BAUBICHON, D , ROCHU, D , CHABRIERE, E , (2010) EUKARYOTIC DING PROTEINS ARE ENDOGENOUS: AN IMMUNOHISTOLOGICAL STUDY IN MOUSE TISSUES.PLOS ONE. VOL. 5. ISSUE 2. P. - 22 71% 1
6 YOSHIDA, Y , SUGIYAMA, S , OYAMADA, T , YOKOYAMA, K , MAKINO, K , (2012) NOVEL MEMBERS OF THE PHOSPHATE REGULON IN ESCHERICHIA COLI O157:H7 IDENTIFIED USING A WHOLE-GENOME SHOTGUN APPROACH.GENE. VOL. 502. ISSUE 1. P. 27 -35 25 56% 9
7 DJEGHADER, A , GOTTHARD, G , SUH, A , GONZALEZ, D , SCOTT, K , ELIAS, M , CHABRIERE, E , (2013) CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION ANALYSIS OF A DING PROTEIN FROM PSEUDOMONAS AERUGINOSA PA14.ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS. VOL. 69. ISSUE . P. 425-429 19 68% 1
8 VASCONCELOS, FND , PADILLA, G , SPIRA, B , (2016) CHROMOBACTERIUM VIOLACEUM ADAPTATION TO LOW-PHOSPHATE CONDITIONS.ARCHIVES OF MICROBIOLOGY. VOL. 198. ISSUE 3. P. 269 -277 21 57% 0
9 YOSHIDA, Y , SUGIYAMA, S , OYAMADA, T , YOKOYAMA, K , KIM, SK , MAKINO, K , (2011) IDENTIFICATION OF PHOB BINDING SITES OF THE YIBD AND YTFK PROMOTER REGIONS IN ESCHERICHIA COLI.JOURNAL OF MICROBIOLOGY. VOL. 49. ISSUE 2. P. 285 -289 19 68% 1
10 SANTOS-BENEIT, F , (2015) THE PHO REGULON: A HUGE REGULATORY NETWORK IN BACTERIA.FRONTIERS IN MICROBIOLOGY. VOL. 6. ISSUE . P. - 33 23% 20

Classes with closest relation at Level 1


Rank Class id link
1 18960 C P LYASE//CARBON PHOSPHORUS BOND//PHN OPERON
2 8320 RESPONSE REGULATOR//TWO COMPONENT SYSTEM//HISTIDINE KINASE
3 34013 GLYCEROPHOSPHOINOSITOL//GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE//GDE DOMAIN
4 16509 TYRR//LONG ACCURATE PCR//BACILLUS SUBTILIS GENOME SEQUENCING
5 14238 EXOPOLYPHOSPHATASE//POLYPHOSPHATE//INORGANIC POLYPHOSPHATE
6 8564 PERIPLASMIC BINDING PROTEIN//BIOL BAKTERIENPHYSIOL//MALTOSE TRANSPORT
7 34165 CHAIR BIOL MED GENET//ASCARIS ALPHA CHYMOTRYPSIN INHIBITOR//ASCARIS HOMOGENATE
8 28230 ORNITHINE CONTAINING LIPID//PHOSPHATIDYLCHOLINE SYNTHASE//ORNITHINE LIPID
9 10521 LACTOSE PERMEASE//PHYSIOL MICROBIOL//MACDONALD S 5 748
10 5827 PORIN//MALTOPORIN//OUTER MEMBRANE PROTEIN

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