Class information for:
Level 1: PACC//PI SENSING//PI REGULATION

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
25959 267 42.3 75%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
225 2             YEAST//SACCHAROMYCES CEREVISIAE//SCHIZOSACCHAROMYCES POMBE 20517
25959 1                   PACC//PI SENSING//PI REGULATION 267

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PACC authKW 830049 6% 48% 15
2 PI SENSING authKW 457458 1% 100% 4
3 PI REGULATION authKW 257318 1% 75% 3
4 POSTHARVEST SCI F H PRODUCE address 247603 9% 9% 24
5 ALKALINE PROTEASE ALP authKW 228729 1% 100% 2
6 ENZYME EXCRETION authKW 228729 1% 100% 2
7 PACC GENE authKW 228729 1% 100% 2
8 PAL SIGNALING PATHWAY authKW 228729 1% 100% 2
9 RIM PATHWAY authKW 228729 1% 100% 2
10 PH REGULATION authKW 201582 11% 6% 29

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Mycology 3264 14% 0% 38
2 Microbiology 1432 31% 0% 83
3 Biotechnology & Applied Microbiology 578 21% 0% 55
4 Genetics & Heredity 555 20% 0% 53
5 Biochemistry & Molecular Biology 438 36% 0% 95
6 Plant Sciences 193 13% 0% 35
7 Cell Biology 132 13% 0% 35
8 Ethnic Studies 45 1% 0% 2
9 Biology 12 3% 0% 7
10 Social Issues 11 1% 0% 2

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 POSTHARVEST SCI F H PRODUCE 247603 9% 9% 24
2 AGRON PARIS GRIGNON UR 216 114364 0% 100% 1
3 AGROPARISTECHUMR2585 114364 0% 100% 1
4 BACTERIOL DUCANE RD 114364 0% 100% 1
5 BIOMOL CHEM MSC 690 114364 0% 100% 1
6 BIOQUIM BIOL MOL MICROORGANISMS 114364 0% 100% 1
7 BIOQUIM GENET LEVADURAS 114364 0% 100% 1
8 CELLULAR BIOCHEM ENZYMOL 114364 0% 100% 1
9 CNRSUMR1238 114364 0% 100% 1
10 FED FUNDAMENTAL BASICS BIOTECHNOL 114364 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 FUNGAL GENETICS AND BIOLOGY 11265 5% 1% 14
2 EUKARYOTIC CELL 10759 6% 1% 15
3 MOLECULAR PLANT-MICROBE INTERACTIONS 4830 4% 0% 12
4 MOLECULAR PLANT PATHOLOGY 1530 1% 0% 4
5 WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY 1344 3% 0% 8
6 GENETICAL RESEARCH 1205 1% 0% 3
7 MOLECULAR AND GENERAL GENETICS 1157 3% 0% 7
8 FEBS OPEN BIO 967 1% 0% 2
9 RACE & CLASS 943 1% 0% 2
10 MOLECULAR AND CELLULAR BIOLOGY 852 5% 0% 13

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PACC 830049 6% 48% 15 Search PACC Search PACC
2 PI SENSING 457458 1% 100% 4 Search PI+SENSING Search PI+SENSING
3 PI REGULATION 257318 1% 75% 3 Search PI+REGULATION Search PI+REGULATION
4 ALKALINE PROTEASE ALP 228729 1% 100% 2 Search ALKALINE+PROTEASE+ALP Search ALKALINE+PROTEASE+ALP
5 ENZYME EXCRETION 228729 1% 100% 2 Search ENZYME+EXCRETION Search ENZYME+EXCRETION
6 PACC GENE 228729 1% 100% 2 Search PACC+GENE Search PACC+GENE
7 PAL SIGNALING PATHWAY 228729 1% 100% 2 Search PAL+SIGNALING+PATHWAY Search PAL+SIGNALING+PATHWAY
8 RIM PATHWAY 228729 1% 100% 2 Search RIM+PATHWAY Search RIM+PATHWAY
9 PH REGULATION 201582 11% 6% 29 Search PH+REGULATION Search PH+REGULATION
10 ENZYME SECRETION 165405 3% 16% 9 Search ENZYME+SECRETION Search ENZYME+SECRETION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BUSSINK, HJ , BIGNELL, EM , MUNERA-HUERTAS, T , LUCENA-AGELL, D , SCAZZOCCHIO, C , ESPESO, EA , BERTUZZI, M , RUDNICKA, J , NEGRETE-URTASUN, S , PENAS-PARILLA, MM , ET AL (2015) REFINING THE PH RESPONSE IN ASPERGILLUS NIDULANS: A MODULATORY TRIAD INVOLVING PACX, A NOVEL ZINC BINUCLEAR CLUSTER PROTEIN.MOLECULAR MICROBIOLOGY. VOL. 98. ISSUE 6. P. 1051 -1072 57 49% 2
2 PRUSKY, D , BARAD, S , MENT, D , BI, FC , (2016) THE PH MODULATION BY FUNGAL SECRETED MOLECULES: A MECHANISM AFFECTING PATHOGENICITY BY POSTHARVEST PATHOGENS.ISRAEL JOURNAL OF PLANT SCIENCES. VOL. 63. ISSUE 1. P. 22 -30 39 59% 0
3 ROSSI, A , CRUZ, AHS , SANTOS, RS , SILVA, PM , SILVA, EM , MENDES, NS , MARTINEZ-ROSSI, NM , (2013) AMBIENT PH SENSING IN FILAMENTOUS FUNGI: PITFALLS IN ELUCIDATING REGULATORY HIERARCHICAL SIGNALING NETWORKS.IUBMB LIFE. VOL. 65. ISSUE 11. P. 930-935 30 77% 0
4 LUCENA-AGELL, D , HERVAS-AGUILAR, A , MUNERA-HUERTAS, T , POUGOVKINA, O , RUDNICKA, J , GALINDO, A , TILBURN, J , ARST, HN , PENALVA, MA , (2016) MUTATIONAL ANALYSIS OF THE ASPERGILLUS AMBIENT PH RECEPTOR PALH UNDERSCORES ITS POTENTIAL AS A TARGET FOR ANTIFUNGAL COMPOUNDS.MOLECULAR MICROBIOLOGY. VOL. 101. ISSUE 6. P. 982 -1002 38 55% 0
5 ANTONIO, CCJ , LUCILA, OC , MIRIAM, TS , SCOTT, G , JOSE, RH , (2010) FUNCTIONAL ANALYSIS OF THE PH RESPONSIVE PATHWAY PAL/RIM IN THE PHYTOPATHOGENIC BASIDIOMYCETE USTILAGO MAYDIS.FUNGAL GENETICS AND BIOLOGY. VOL. 47. ISSUE 5. P. 446-457 40 57% 3
6 MENT, D , ALKAN, N , LURIA, N , BI, FC , REUVENI, E , FLUHR, R , PRUSKY, D , (2015) A ROLE OF AREB IN THE REGULATION OF PACC-DEPENDENT ACID-EXPRESSED-GENES AND PATHOGENICITY OF COLLETOTRICHUM GLOEOSPORIOIDES.MOLECULAR PLANT-MICROBE INTERACTIONS. VOL. 28. ISSUE 2. P. 154 -166 39 51% 1
7 BLANCHIN-ROLAND, S , DA COSTA, G , GAILLARDIN, C , (2008) AMBIENT PH SIGNALLING IN THE YEAST YARROWIA LIPOLYTICA INVOLVES YLRIM23P/PALC, WHICH INTERACTS WITH SNF7P/VPS32P, BUT DOES NOT REQUIRE THE LONG C TERMINUS OF YLRIM9P/PALI.MICROBIOLOGY-SGM. VOL. 154. ISSUE . P. 1668-1676 32 64% 10
8 CORNET, M , GAILLARDIN, C , (2014) PH SIGNALING IN HUMAN FUNGAL PATHOGENS: A NEW TARGET FOR ANTIFUNGAL STRATEGIES.EUKARYOTIC CELL. VOL. 13. ISSUE 3. P. 342 -352 47 34% 11
9 PENALVA, MA , LUCENA-AGELL, D , ARST, HN , (2014) LIAISON ALCALINE: PALS ENTICE NON-ENDOSOMAL ESCRTS TO THE PLASMA MEMBRANE FOR PH SIGNALING.CURRENT OPINION IN MICROBIOLOGY. VOL. 22. ISSUE . P. 49 -59 32 48% 10
10 SILVA, EM , FREITAS, JS , GRAS, DE , SQUINA, FM , LEAL, J , SILVEIRA, HCS , MARTINEZ-ROSSI, NM , ROSSI, A , (2008) IDENTIFICATION OF GENES DIFFERENTIALLY EXPRESSED IN A STRAIN OF THE MOLD ASPERGILLUS NIDULANS CARRYING A LOSS-OF-FUNCTION MUTATION IN THE PALA GENE.CANADIAN JOURNAL OF MICROBIOLOGY. VOL. 54. ISSUE 10. P. 803 -811 29 64% 0

Classes with closest relation at Level 1


Rank Class id link
1 20729 PHO85//P I TRANSPORTER//PHO84
2 6889 ESCRT//TSG101//ALG 2
3 13375 MEMBRANE TRANSPORT//TRK1//ENA1
4 1786 CANDIDA ALBICANS//ABERDEEN FUNGAL GRP//MICROBIAL PATHOGEN MECH
5 8220 NITROGEN METABOLITE REPRESSION//RECH MICROBIOL JM WIAME//GLN3
6 20614 YARROWIA LIPOLYTICA//GAMMA DECALACTONE//XPR2
7 37596 AFRICAN EPIC//DEMOCRATIZING SCIENCE MOVEMENTS//ETHNOGRAPHY OF LAW
8 30957 NAD DEGRADATION//DEUT SAMMLUNG MIKROORGANISMEN//AGR CHEM11 SAKURAGAOKA1 CHOMESETAGAYA KU
9 9198 SCLEROTINIA SCLEROTIORUM//CONIOTHYRIUM MINITANS//WHITE MOLD
10 24694 PARAVEINAL MESOPHYLL//ACID PHOSPHATASE//BRIX ACID RATIO

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