Class information for:
Level 1: DYE LINKED L PROLINE DEHYDROGENASE//PUTA//PROLINE UTILIZATION A

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
27440 229 33.9 61%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
7 3       PLANT SCIENCES//PLANT PHYSIOLOGY//ARABIDOPSIS 149859
2117 2             GLYCINE BETAINE//COMPATIBLE SOLUTES//ECTOINE 5102
27440 1                   DYE LINKED L PROLINE DEHYDROGENASE//PUTA//PROLINE UTILIZATION A 229

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 DYE LINKED L PROLINE DEHYDROGENASE authKW 948210 3% 89% 8
2 PUTA authKW 816719 3% 88% 7
3 PROLINE UTILIZATION A authKW 666711 2% 100% 5
4 PROLINE CATABOLISM authKW 435577 3% 47% 7
5 PROLINE DEHYDROGENASE authKW 408339 6% 22% 14
6 DELTA1 PYRROLINE 2 CARBOXYLATE REDUCTASE authKW 266684 1% 100% 2
7 GUELPH WATERLOO WORK CHEM MICROBIOL address 266684 1% 100% 2
8 TRANS 3 HYDROXY L PROLINE METABOLISM authKW 266684 1% 100% 2
9 P5C DEHYDROGENASE authKW 177788 1% 67% 2
10 AMIDOAMINE OXIDE authKW 133342 0% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 1674 69% 0% 158
2 Microbiology 483 20% 0% 46
3 Biophysics 440 17% 0% 38
4 Biochemical Research Methods 56 6% 0% 14
5 Biotechnology & Applied Microbiology 53 8% 0% 18
6 Crystallography 25 3% 0% 8
7 Genetics & Heredity 11 4% 0% 10
8 Cell Biology 6 5% 0% 11
9 Mycology 1 0% 0% 1
10 Biology 1 1% 0% 3

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GUELPH WATERLOO WORK CHEM MICROBIOL 266684 1% 100% 2
2 NATURWISSEN FAK 1 133342 0% 100% 1
3 UNITE 7591 133342 0% 100% 1
4 REDOX BIOL 111503 7% 6% 15
5 BEADLE N258 76193 1% 29% 2
6 ANALYT EXPT SCI 76185 3% 10% 6
7 BIOTECHNOL ZENTRAL 66670 0% 50% 1
8 JOHN CURTIN MED BIOCHEM 66670 0% 50% 1
9 PROT TECHNOL ASSAYS 66670 0% 50% 1
10 UNITE 6022 66670 0% 50% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 3056 15% 0% 35
2 JOURNAL OF BACTERIOLOGY 1929 10% 0% 22
3 FEBS OPEN BIO 1128 1% 0% 2
4 JOURNAL OF BIOLOGICAL CHEMISTRY 875 14% 0% 32
5 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 693 2% 0% 4
6 IRANIAN JOURNAL OF BIOTECHNOLOGY 668 0% 1% 1
7 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 491 3% 0% 8
8 MICROBIOLOGY-SGM 418 2% 0% 5
9 AMINO ACIDS 331 1% 0% 3
10 CANADIAN JOURNAL OF BIOCHEMISTRY 289 0% 0% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 DYE LINKED L PROLINE DEHYDROGENASE 948210 3% 89% 8 Search DYE+LINKED+L+PROLINE+DEHYDROGENASE Search DYE+LINKED+L+PROLINE+DEHYDROGENASE
2 PUTA 816719 3% 88% 7 Search PUTA Search PUTA
3 PROLINE UTILIZATION A 666711 2% 100% 5 Search PROLINE+UTILIZATION+A Search PROLINE+UTILIZATION+A
4 PROLINE CATABOLISM 435577 3% 47% 7 Search PROLINE+CATABOLISM Search PROLINE+CATABOLISM
5 PROLINE DEHYDROGENASE 408339 6% 22% 14 Search PROLINE+DEHYDROGENASE Search PROLINE+DEHYDROGENASE
6 DELTA1 PYRROLINE 2 CARBOXYLATE REDUCTASE 266684 1% 100% 2 Search DELTA1+PYRROLINE+2+CARBOXYLATE+REDUCTASE Search DELTA1+PYRROLINE+2+CARBOXYLATE+REDUCTASE
7 TRANS 3 HYDROXY L PROLINE METABOLISM 266684 1% 100% 2 Search TRANS+3+HYDROXY+L+PROLINE+METABOLISM Search TRANS+3+HYDROXY+L+PROLINE+METABOLISM
8 P5C DEHYDROGENASE 177788 1% 67% 2 Search P5C+DEHYDROGENASE Search P5C+DEHYDROGENASE
9 AMIDOAMINE OXIDE 133342 0% 100% 1 Search AMIDOAMINE+OXIDE Search AMIDOAMINE+OXIDE
10 AMIDOBETAINE 133342 0% 100% 1 Search AMIDOBETAINE Search AMIDOBETAINE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 SINGH, RK , TANNER, JJ , (2012) UNIQUE STRUCTURAL FEATURES AND SEQUENCE MOTIFS OF PROLINE UTILIZATION A (PUTA).FRONTIERS IN BIOSCIENCE-LANDMARK. VOL. 17. ISSUE . P. 556-568 41 63% 5
2 MOXLEY, MA , BECKER, DF , (2012) RAPID REACTION KINETICS OF PROLINE DEHYDROGENASE IN THE MULTIFUNCTIONAL PROLINE UTILIZATION A PROTEIN.BIOCHEMISTRY. VOL. 51. ISSUE 1. P. 511 -520 24 75% 8
3 BECKER, DF , ZHU, WD , MOXLEY, MA , (2011) FLAVIN REDOX SWITCHING OF PROTEIN FUNCTIONS.ANTIOXIDANTS & REDOX SIGNALING. VOL. 14. ISSUE 6. P. 1079-1091 38 45% 12
4 VINOD, MP , BELLUR, P , BECKER, DF , (2002) ELECTROCHEMICAL AND FUNCTIONAL CHARACTERIZATION OF THE PROLINE DEHYDROGENASE DOMAIN OF THE PUTA FLAVOPROTEIN FROM ESCHERICHIA COLI.BIOCHEMISTRY. VOL. 41. ISSUE 20. P. 6525-6532 25 81% 16
5 ARENTSON, BW , HAYES, EL , ZHU, WD , SINGH, H , TANNER, JJ , BECKER, DF , (2016) ENGINEERING A TRIFUNCTIONAL PROLINE UTILIZATION A CHIMAERA BY FUSING A DNA-BINDING DOMAIN TO A BIFUNCTIONAL PUTA.BIOSCIENCE REPORTS. VOL. 36. ISSUE . P. - 26 54% 0
6 ZHU, WD , HAILE, AM , SINGH, RK , LARSON, JD , SMITHEN, D , CHAN, JY , TANNER, JJ , BECKER, DF , (2013) INVOLVEMENT OF THE BETA 3-ALPHA 3 LOOP OF THE PROLINE DEHYDROGENASE DOMAIN IN ALLOSTERIC REGULATION OF MEMBRANE ASSOCIATION OF PROLINE UTILIZATION A.BIOCHEMISTRY. VOL. 52. ISSUE 26. P. 4482-4491 19 76% 1
7 KRISHNAN, N , BECKER, DF , (2005) CHARACTERIZATION OF A BIFUNCTIONAL PUTA HOMOLOGUE FROM BRADYRHIZOBIUM JAPONICUM AND IDENTIFICATION OF AN ACTIVE SITE RESIDUE THAT MODULATES PROLINE REDUCTION OF THE FLAVIN ADENINE DINUCLEOTIDE COFACTOR.BIOCHEMISTRY. VOL. 44. ISSUE 25. P. 9130-9139 26 65% 20
8 ZHU, WD , BECKER, DF , (2003) FLAVIN REDOX STATE TRIGGERS CONFORMATIONAL CHANGES IN THE PUTA PROTEIN FROM ESCHERICHIA COLI.BIOCHEMISTRY. VOL. 42. ISSUE 18. P. 5469-5477 23 74% 25
9 ZHOU, YZ , ZHU, WD , BELLUR, PS , REWINKEL, D , BECKER, DF , (2008) DIRECT LINKING OF METABOLISM AND GENE EXPRESSION IN THE PROLINE UTILIZATION A PROTEIN FROM ESCHERICHIA COLI.AMINO ACIDS. VOL. 35. ISSUE 4. P. 711-718 20 74% 13
10 MOXLEY, MA , TANNER, JJ , BECKER, DF , (2011) STEADY-STATE KINETIC MECHANISM OF THE PROLINE:UBIQUINONE OXIDOREDUCTASE ACTIVITY OF PROLINE UTILIZATION A (PUTA) FROM ESCHERICHIA COLI.ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS. VOL. 516. ISSUE 2. P. 113 -120 24 56% 8

Classes with closest relation at Level 1


Rank Class id link
1 9317 PROLINE//P5CS//PROLINE BIOSYNTHESIS
2 7929 ECTOINE//COMPATIBLE SOLUTES//HYDROXYECTOINE
3 24529 AIST TSUKUBA 6 10//LEUCINE RESPONSIVE REGULATORY PROTEIN//FFRP
4 10521 LACTOSE PERMEASE//PHYSIOL MICROBIOL//MACDONALD S 5 748
5 22069 ARGININE REPRESSOR//ARGININE REPRESSOR PROTEIN//ARGR
6 20533 ALANINE RACEMASE//GLUTAMATE RACEMASE//RACEMASE
7 20458 FLAVOCYTOCHROME B2//TORULOPSIS GLABRATA//PYRUVATE PRODUCTION
8 16360 PYRANOSE 2 OXIDASE//PYRANOSE OXIDASE//PYRANOSE DEHYDROGENASE
9 34115 KIAA1199//MU CRYSTALLIN//CRYM
10 18161 CYTOCHROME BD//CYTOCHROME D//CYDX

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