Class information for:
Level 1: PTPN22//PTPN22 GENE//PROTEIN TYROSINE PHOSPHATASE NONRECEPTOR 22

Basic class information

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.

Cluster id	Level	Cluster label	#P
10	4	IMMUNOLOGY//TRANSPLANTATION//RHEUMATOLOGY	1369268
125	3	RHEUMATOLOGY//RHEUMATOID ARTHRITIS//RHEUMATOL	69344
2015	2	CITRULLINATION//PTPN22//RHEUMATOID FACTOR	5884
13805	1	PTPN22//PTPN22 GENE//PROTEIN TYROSINE PHOSPHATASE NONRECEPTOR 22	842

Terms with highest relevance score

rank	Category	termType	chi_square	shrOfCwithTerm	shrOfTermInClass	termInClass
1	PTPN22	authKW	3600301	15%	75%	129
2	PTPN22 GENE	authKW	479090	2%	80%	16
3	PROTEIN TYROSINE PHOSPHATASE NONRECEPTOR 22	authKW	467863	2%	83%	15
4	LYP	authKW	330397	2%	55%	16
5	STAT4	authKW	240246	3%	22%	29
6	STAT4 GENE	authKW	229254	1%	88%	7
7	PROTEIN TYROSINE PHOSPHATASE NON RECEPTOR TYPE 22	authKW	183400	1%	70%	7
8	TRAF1 C5	authKW	133674	1%	71%	5
9	IL2RA	authKW	126313	1%	38%	9
10	LYP PROTEIN	authKW	112288	0%	100%	3

Web of Science journal categories

chi_square_rank	Category	chi_square	shrOfCwithTerm	shrOfTermInClass	termInClass
1	Rheumatology	20806	29%	0%	241
2	Immunology	3323	31%	0%	258
3	Genetics & Heredity	2065	21%	0%	180
4	Endocrinology & Metabolism	273	8%	0%	68
5	Pathology	115	4%	0%	33
6	Cell Biology	82	7%	0%	60
7	Medicine, Research & Experimental	56	4%	0%	36
8	Biochemistry & Molecular Biology	33	10%	0%	85
9	Allergy	15	1%	0%	7
10	Mathematical & Computational Biology	4	1%	0%	6

Address terms

chi_square_rank	term	chi_square	shrOfCwithTerm	shrOfTermInClass	termInClass
1	MUSCULOSKELETAL GENET SECT	99809	0%	67%	4
2	ROBERT S BOAS GENOM HUMAN GENET	96986	2%	14%	18
3	GENET GENOM BRANCH	91276	1%	24%	10
4	MOL MED HUMAN GENET	88710	1%	30%	8
5	ADDENBROOKES HOSPJUVENILE DIABET FDN	74859	0%	100%	2
6	NIHR OXFORD MUSCULOSKELETAL UNIT	74859	0%	100%	2
7	UNIT ENDOCRINE METAB DIS	74859	0%	100%	2
8	GENHOTEL EA3886	58576	1%	26%	6
9	DITID	56141	0%	50%	3
10	PARASITOL BIOMED LOPEZ NEYRA	50178	4%	4%	31

Journals

chi_square_rank	term	chi_square	shrOfCwithTerm	shrOfTermInClass	termInClass
1	GENES AND IMMUNITY	30774	4%	2%	34
2	ARTHRITIS AND RHEUMATISM	7021	5%	0%	44
3	ANNALS OF THE RHEUMATIC DISEASES	6262	5%	0%	39
4	HUMAN IMMUNOLOGY	5776	3%	1%	27
5	ARTHRITIS RESEARCH & THERAPY	5652	3%	1%	23
6	TISSUE ANTIGENS	4031	3%	0%	22
7	INTERNATIONAL JOURNAL OF IMMUNOGENETICS	3541	1%	1%	9
8	NATURE GENETICS	2633	2%	0%	19
9	RHEUMATOLOGY	2459	2%	0%	18
10	NATURE REVIEWS RHEUMATOLOGY	2434	1%	1%	6

Author Key Words

chi_square_rank	term	chi_square	shrOfCwithTerm	shrOfTermInClass	termInClass	LCSH search	Wikipedia search
1	PTPN22	3600301	15%	75%	129	Search PTPN22	Search PTPN22
2	PTPN22 GENE	479090	2%	80%	16	Search PTPN22+GENE	Search PTPN22+GENE
3	PROTEIN TYROSINE PHOSPHATASE NONRECEPTOR 22	467863	2%	83%	15	Search PROTEIN+TYROSINE+PHOSPHATASE+NONRECEPTOR+22	Search PROTEIN+TYROSINE+PHOSPHATASE+NONRECEPTOR+22
4	LYP	330397	2%	55%	16	Search LYP	Search LYP
5	STAT4	240246	3%	22%	29	Search STAT4	Search STAT4
6	STAT4 GENE	229254	1%	88%	7	Search STAT4+GENE	Search STAT4+GENE
7	PROTEIN TYROSINE PHOSPHATASE NON RECEPTOR TYPE 22	183400	1%	70%	7	Search PROTEIN+TYROSINE+PHOSPHATASE+NON+RECEPTOR+TYPE+22	Search PROTEIN+TYROSINE+PHOSPHATASE+NON+RECEPTOR+TYPE+22
8	TRAF1 C5	133674	1%	71%	5	Search TRAF1+C5	Search TRAF1+C5
9	IL2RA	126313	1%	38%	9	Search IL2RA	Search IL2RA
10	LYP PROTEIN	112288	0%	100%	3	Search LYP+PROTEIN	Search LYP+PROTEIN

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1

rank	cluster_id2	link
1	33198	FCRL3//FCRL//FCRL3 GENE
2	6840	IRF5//INTERFERON REGULATORY FACTOR 5//SYSTEMIC LUPUS ERYTHEMATOSUS
3	12049	SHARED EPITOPE//HLA DRB1//HLA DRB1 ALLELES
4	2510	CITRULLINATION//PEPTIDYLARGININE DEIMINASE//RHEUMATOID FACTOR
5	15169	GRAVES DISEASE//AUTOIMMUNE THYROID DISEASE//HASHIMOTOS THYROIDITIS
6	17076	SYNOVIAL BIOPSY//SYNOVITIS SCORE//SYNOVIAL TISSUE
7	19397	A20//RNF11//TNFAIP3
8	9976	CTLA 4//CTLA 4 GENE//CYTOTOXIC T LYMPHOCYTE ANTIGEN 4
9	6580	IDDM2//INS VNTR//INSULIN GENE
10	3138	RARE VARIANTS//GENETIC EPIDEMIOLOGY//BURDEN TEST

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Class information for: Level 1: PTPN22//PTPN22 GENE//PROTEIN TYROSINE PHOSPHATASE NONRECEPTOR 22