Class information for:
Level 1: PEPTIDE IDENTIFICATION//PROTEOGENOMICS//PROTEIN IDENTIFICATION

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
133 3       BIOCHEMICAL RESEARCH METHODS//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//PROTEOMICS 67621
717 2             PROTEOMICS//JOURNAL OF PROTEOME RESEARCH//BIOCHEMICAL RESEARCH METHODS 13184
2664 1                   PEPTIDE IDENTIFICATION//PROTEOGENOMICS//PROTEIN IDENTIFICATION 2210

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PEPTIDE IDENTIFICATION authKW 1001849 5% 65% 108
2 PROTEOGENOMICS authKW 674116 4% 60% 79
3 PROTEIN IDENTIFICATION authKW 533228 6% 26% 142
4 JOURNAL OF PROTEOME RESEARCH journal 442955 20% 7% 441
5 MISSING PROTEINS authKW 415882 2% 83% 35
6 PROTEIN INFERENCE authKW 315893 1% 92% 24
7 PROTEOMICS STANDARDS INITIATIVE authKW 270925 1% 100% 19
8 HUMAN PROTEOME PROJECT authKW 259962 1% 65% 28
9 DATABASE SEARCH authKW 236812 3% 23% 72
10 PROTEOMICS journal 225613 14% 5% 304

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemical Research Methods 105702 72% 0% 1587
2 Mathematical & Computational Biology 9270 12% 0% 269
3 Biotechnology & Applied Microbiology 2694 16% 0% 351
4 Chemistry, Analytical 2300 15% 0% 332
5 Spectroscopy 1160 7% 0% 151
6 Biochemistry & Molecular Biology 1140 22% 0% 492
7 Genetics & Heredity 180 5% 0% 115
8 Computer Science, Interdisciplinary Applications 29 2% 0% 37
9 Statistics & Probability 23 1% 0% 30
10 Mathematics, Interdisciplinary Applications 2 1% 0% 16

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 EMBL OUTSTN 118409 2% 19% 44
2 PROTEOME INFORMAT GRP 110295 1% 37% 21
3 JIM AYERS PRECANC DETECT DIAG 82246 1% 38% 15
4 MED PROT 75841 2% 10% 55
5 SYST ENGN COMP SCI PROGRAM 61677 1% 29% 15
6 COMPUTAT MASS SPE OMETRY 59402 0% 42% 10
7 BIOMED INFORMAT ANTWERP BIOMINA 57498 0% 37% 11
8 MODEL ORGANISM PROTEOMES 57029 0% 50% 8
9 PROTE SIGNAL TRANSDUCT 56106 2% 11% 36
10 MOL SYST BIOL 53514 3% 6% 66

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF PROTEOME RESEARCH 442955 20% 7% 441
2 PROTEOMICS 225613 14% 5% 304
3 MOLECULAR & CELLULAR PROTEOMICS 155324 8% 6% 187
4 JOURNAL OF PROTEOMICS 30683 3% 3% 77
5 BIOINFORMATICS 19693 6% 1% 125
6 EXPERT REVIEW OF PROTEOMICS 12468 1% 3% 26
7 JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY 12444 3% 1% 65
8 BMC BIOINFORMATICS 10951 4% 1% 78
9 PROTEOME SCIENCE 8028 1% 3% 18
10 OMICS-A JOURNAL OF INTEGRATIVE BIOLOGY 6948 1% 3% 19

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PEPTIDE IDENTIFICATION 1001849 5% 65% 108 Search PEPTIDE+IDENTIFICATION Search PEPTIDE+IDENTIFICATION
2 PROTEOGENOMICS 674116 4% 60% 79 Search PROTEOGENOMICS Search PROTEOGENOMICS
3 PROTEIN IDENTIFICATION 533228 6% 26% 142 Search PROTEIN+IDENTIFICATION Search PROTEIN+IDENTIFICATION
4 MISSING PROTEINS 415882 2% 83% 35 Search MISSING+PROTEINS Search MISSING+PROTEINS
5 PROTEIN INFERENCE 315893 1% 92% 24 Search PROTEIN+INFERENCE Search PROTEIN+INFERENCE
6 PROTEOMICS STANDARDS INITIATIVE 270925 1% 100% 19 Search PROTEOMICS+STANDARDS+INITIATIVE Search PROTEOMICS+STANDARDS+INITIATIVE
7 HUMAN PROTEOME PROJECT 259962 1% 65% 28 Search HUMAN+PROTEOME+PROJECT Search HUMAN+PROTEOME+PROJECT
8 DATABASE SEARCH 236812 3% 23% 72 Search DATABASE+SEARCH Search DATABASE+SEARCH
9 C HPP 206040 1% 85% 17 Search C+HPP Search C+HPP
10 CHROMOSOME CENTRIC HUMAN PROTEOME PROJECT 206040 1% 85% 17 Search CHROMOSOME+CENTRIC+HUMAN+PROTEOME+PROJECT Search CHROMOSOME+CENTRIC+HUMAN+PROTEOME+PROJECT

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 4607 QUANTITATIVE PROTEOMICS//STABLE ISOTOPE LABELING//ISOBARIC TAG
2 8288 TARGETED PROTEOMICS//SELECTED REACTION MONITORING//MULTIPLE REACTION MONITORING
3 15254 FASP//SDS REMOVAL//TOTAL PROTEIN APPROACH
4 10084 PEPTIDE FRAGMENTATION//PROTONATED PEPTIDES//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY
5 7453 ION ION REACTIONS//ELECTRON CAPTURE DISSOCIATION//ELECTRON TRANSFER DISSOCIATION
6 38623 PRIMARY HUMAN CELLS//ASAFOETIDA EXTRACT//CELL TYPE SPECIFIC SIGNATURES
7 28608 AFFINITY PURIFICATION COUPLED TO MASS SPECTROMETRY//TANDEM AFFINITY PURIFICATION//SAINTEXPRESS
8 4528 PHOSPHOPROTEOMICS//PHOSPHOPEPTIDES//PHOSPHOPEPTIDE ENRICHMENT
9 36544 BIOINFORMAT HIGH THROUGHPUT ANAL//HIGH THROUGHPUT ANAL CORE//CDO ANALYT
10 8828 TWO DIMENSIONAL POLYACRYLAMIDE GEL ELECTROPHORESIS//ELECTROPHORESIS//MYOCARDIAL PROTEINS

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