Class information for:
Level 2: AUTOPHAGY//BECLIN 1//LC3

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
203 3       AUTOPHAGY//HEAT SHOCK PROTEIN//PROTEASOME 52353
1147 2             AUTOPHAGY//BECLIN 1//LC3 9870
79 1                   AUTOPHAGY//BECLIN 1//LC3 4568
8938 1                   AUTOPHAGY//XENOPHAGY//IRGM 1233
12498 1                   ANTILIPOLYTIC DRUGS//RIC BIOL PATOL INVECCHIAMENTO//EXCESS PEROXISOMES 932
14668 1                   AUTOPHAGY//CARDIOVASC ALTERNAT MED//DESMIN RELATED CARDIOMYOPATHY 785
18757 1                   AUTOPHAGY//REMOTE DAMAGE//BECLIN 1 561
19649 1                   DANON DISEASE//LAMP 2//CHAPERONE MEDIATED AUTOPHAGY 519
21231 1                   AUTOPHAGY//GERIATR MED NEPHROL B6//313 L1 CELLS 451
23003 1                   MUCOLIPIDOSIS TYPE IV//MUCOLIPIN//MUCOLIPIDOSIS IV 383
26157 1                   BNIP3//BCH DOMAIN//HGTD P 283
36244 1                   ANOMATERIALS//ANTI MIGRATION AND ANTI INVASION//AUTOPHAGY MODULATING EFFECT 101
38760 1                   ACACIA CATECHU A CATECHU HARD WOOD//GLYCAEMIA LEVEL//HIGH FRUCTOSE HIGH FAT DIET HFD DIABETIC RATS 54

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 AUTOPHAGY authKW 4422247 42% 34% 4109
2 BECLIN 1 authKW 854020 4% 65% 411
3 LC3 authKW 564616 3% 56% 314
4 AUTOPHAGOSOME authKW 461418 3% 57% 252
5 ATG5 authKW 221374 1% 61% 113
6 MACROAUTOPHAGY authKW 214609 1% 58% 116
7 BNIP3 authKW 210213 1% 61% 108
8 LYSOSOME authKW 196979 5% 13% 484
9 DANON DISEASE authKW 150909 1% 93% 51
10 ATG7 authKW 127480 1% 61% 66

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Cell Biology 54191 38% 1% 3774
2 Biochemistry & Molecular Biology 9549 28% 0% 2810
3 Oncology 3917 12% 0% 1211
4 Medicine, Research & Experimental 1433 6% 0% 563
5 Biophysics 1335 5% 0% 520
6 Pathology 749 3% 0% 307
7 Virology 456 2% 0% 213
8 CYTOLOGY & HISTOLOGY 349 0% 0% 31
9 Cardiac & Cardiovascular System 322 4% 0% 356
10 Immunology 270 4% 0% 439

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 AUTOPHAGY 94592 1% 54% 55
2 U756 61087 0% 64% 30
3 MOL CANC GRP 55208 0% 58% 30
4 BIOREGULAT METAB 53250 0% 76% 22
5 INTRACELLULAR MEMBRANE DYNAM 51052 0% 80% 20
6 ANAT CELL DEV BIOL 47456 0% 33% 45
7 PROT METAB PROJECT 36754 0% 52% 22
8 SECRETORY PATHWAYS 30394 0% 53% 18
9 CELLULAR REGULAT 29929 0% 36% 26
10 TUMOUR CELL DEATH 27217 0% 53% 16

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 AUTOPHAGY 1437288 9% 53% 847
2 CELL DEATH AND DIFFERENTIATION 9101 1% 3% 98
3 CELL DEATH & DISEASE 6454 1% 3% 74
4 RBC-CELL BIOLOGY REVIEWS 5823 0% 23% 8
5 CELL HOST & MICROBE 3761 0% 3% 37
6 ACTA BIOLOGICA ET MEDICA GERMANICA 2999 0% 4% 22
7 JOURNAL OF CELL BIOLOGY 2984 1% 1% 127
8 ONCOTARGET 2748 1% 1% 123
9 NATURE CELL BIOLOGY 2673 0% 2% 49
10 TRAFFIC 2410 0% 2% 39

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 AUTOPHAGY 4422247 42% 34% 4109 Search AUTOPHAGY Search AUTOPHAGY
2 BECLIN 1 854020 4% 65% 411 Search BECLIN+1 Search BECLIN+1
3 LC3 564616 3% 56% 314 Search LC3 Search LC3
4 AUTOPHAGOSOME 461418 3% 57% 252 Search AUTOPHAGOSOME Search AUTOPHAGOSOME
5 ATG5 221374 1% 61% 113 Search ATG5 Search ATG5
6 MACROAUTOPHAGY 214609 1% 58% 116 Search MACROAUTOPHAGY Search MACROAUTOPHAGY
7 BNIP3 210213 1% 61% 108 Search BNIP3 Search BNIP3
8 LYSOSOME 196979 5% 13% 484 Search LYSOSOME Search LYSOSOME
9 DANON DISEASE 150909 1% 93% 51 Search DANON+DISEASE Search DANON+DISEASE
10 ATG7 127480 1% 61% 66 Search ATG7 Search ATG7

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 1541 ALPHA SYNUCLEIN//PARKIN//LRRK2
2 4084 PAR 4//DAP KINASE//DEATH ASSOCIATED PROTEIN KINASE
3 2121 UNFOLDED PROTEIN RESPONSE//ENDOPLASMIC RETICULUM STRESS//ER STRESS
4 1016 PTEN//MTOR//PI3K
5 3877 PHOSPHOLIPIDOSIS//CATIONIC AMPHIPHILIC DRUGS//DRUG INDUCED PHOSPHOLIPIDOSIS
6 2749 ASIALOGLYCOPROTEIN RECEPTOR//APICAL SORTING//MARGARET DYSON VIS
7 1862 CATHEPSIN B//CATHEPSIN//CATHEPSIN D
8 555 TRAFFIC//CLATHRIN//ENDOCYTOSIS
9 2363 PEUTZ JEGHERS SYNDROME//AMPK//LKB1
10 2929 NRF2//KEAP1//ANTIOXIDANT RESPONSE ELEMENT

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