Class information for:
Level 2: PROTEIN TRANSLOCATION//PROTEIN IMPORT//SIGNAL RECOGNITION PARTICLE

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
57 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 94459
637 2             PROTEIN TRANSLOCATION//PROTEIN IMPORT//SIGNAL RECOGNITION PARTICLE 14113
2144 1                   SECA//SECB//SECYEG 2378
2751 1                   PROTEIN IMPORT//TOM COMPLEX//MITOCHONDRIAL PROTEIN IMPORT 2188
4405 1                   TRANSMEMBRANE HELIX//TRANSMEMBRANE HELICES//MEMBRANE PROTEIN 1823
4662 1                   SIGNAL RECOGNITION PARTICLE//SEC61//FFH 1771
5383 1                   ATP DEPENDENT PROTEASE//CLPB//FTSH 1662
9571 1                   CHLOROPLAST PROTEIN IMPORT//PROTEIN IMPORT//CHLOROPLAST 1173
10438 1                   AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX 1093
15615 1                   HTRA1//HTRA//HTRA2 729
15864 1                   TWIN ARGININE TRANSLOCATION//TAT PATHWAY//TWIN ARGININE 714
23646 1                   LOLB//LOLA//LOL SYSTEM 362
28669 1                   RHOMBOID PROTEASE//GLPG//RHOMBOID 220

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROTEIN TRANSLOCATION authKW 467426 2% 61% 342
2 PROTEIN IMPORT authKW 396323 2% 59% 299
3 SIGNAL RECOGNITION PARTICLE authKW 248679 1% 77% 144
4 SECA authKW 229142 1% 80% 129
5 PROTEIN TRANSPORT authKW 154247 1% 38% 180
6 TRANSLOCON authKW 144905 1% 69% 94
7 AUTOTRANSPORTER authKW 131882 1% 68% 87
8 ATP DEPENDENT PROTEASE authKW 122812 0% 79% 70
9 ZBMZ address 117478 1% 53% 99
10 MEMBRANE PROTEIN authKW 114961 4% 10% 505

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemistry & Molecular Biology 90282 65% 1% 9119
2 Cell Biology 29586 25% 0% 3461
3 Biophysics 18454 14% 1% 1950
4 Microbiology 14008 14% 0% 2014
5 Plant Sciences 1477 6% 0% 860
6 Biochemical Research Methods 1471 4% 0% 614
7 Biotechnology & Applied Microbiology 587 4% 0% 605
8 Mathematical & Computational Biology 358 1% 0% 177
9 Genetics & Heredity 222 3% 0% 449
10 Biology 212 2% 0% 259

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 ZBMZ 117478 1% 53% 99
2 ZENTRUM BIOCHEM MOL ZELLFOR 41864 0% 57% 33
3 BIOMEMBRANE 27899 1% 12% 103
4 FAK BIOL 27820 1% 10% 126
5 BIOCHEM MEMBRANES 22393 0% 25% 40
6 CANADA CHAIR BACTERIAL ANIM DIS 20282 0% 91% 10
7 MOL MICROBIOL 19856 2% 4% 242
8 PROT EVOLUT 19071 0% 21% 41
9 STOCKHOLM BIOINFORMAT 18765 0% 20% 42
10 MEMBRANE PROTE 18315 0% 33% 25

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF BIOLOGICAL CHEMISTRY 35219 11% 1% 1587
2 JOURNAL OF BACTERIOLOGY 34471 5% 2% 727
3 EMBO JOURNAL 20018 3% 2% 399
4 JOURNAL OF MOLECULAR BIOLOGY 17942 3% 2% 442
5 MOLECULAR MICROBIOLOGY 16956 2% 3% 307
6 FEBS LETTERS 9877 3% 1% 439
7 JOURNAL OF CELL BIOLOGY 9540 2% 2% 268
8 BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES 9251 1% 3% 165
9 PROTEIN SCIENCE 8012 1% 2% 154
10 BIOCHEMISTRY 7257 3% 1% 437

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PROTEIN TRANSLOCATION 467426 2% 61% 342 Search PROTEIN+TRANSLOCATION Search PROTEIN+TRANSLOCATION
2 PROTEIN IMPORT 396323 2% 59% 299 Search PROTEIN+IMPORT Search PROTEIN+IMPORT
3 SIGNAL RECOGNITION PARTICLE 248679 1% 77% 144 Search SIGNAL+RECOGNITION+PARTICLE Search SIGNAL+RECOGNITION+PARTICLE
4 SECA 229142 1% 80% 129 Search SECA Search SECA
5 PROTEIN TRANSPORT 154247 1% 38% 180 Search PROTEIN+TRANSPORT Search PROTEIN+TRANSPORT
6 TRANSLOCON 144905 1% 69% 94 Search TRANSLOCON Search TRANSLOCON
7 AUTOTRANSPORTER 131882 1% 68% 87 Search AUTOTRANSPORTER Search AUTOTRANSPORTER
8 ATP DEPENDENT PROTEASE 122812 0% 79% 70 Search ATP+DEPENDENT+PROTEASE Search ATP+DEPENDENT+PROTEASE
9 MEMBRANE PROTEIN 114961 4% 10% 505 Search MEMBRANE+PROTEIN Search MEMBRANE+PROTEIN
10 TWIN ARGININE TRANSLOCATION 101803 0% 89% 51 Search TWIN+ARGININE+TRANSLOCATION Search TWIN+ARGININE+TRANSLOCATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 2798 CALRETICULIN//ERAD//P97
2 3573 MITOCHONDRIAL CARRIER//ADP ATP CARRIER//OXOGLUTARATE CARRIER
3 1625 PHOSPHOLIPASE A2//PORIN//COLICIN
4 1897 ECTOINE//COMPATIBLE SOLUTES//EFFLUX PUMP INHIBITOR
5 775 ALTERNATIVE OXIDASE//CYTOCHROME C OXIDASE//COMPLEX I
6 1638 LACTOCOCCUS LACTIS//BACILLUS SUBTILIS//JOURNAL OF BACTERIOLOGY
7 2907 EXOPOLYPHOSPHATASE//POLYPHOSPHATE//INORGANIC POLYPHOSPHATE
8 2645 DICHELOBACTER NODOSUS//FOOTROT//TYPE IV PILI
9 3519 PEPTIDE DEFORMYLASE//ARGINYLATION//N END RULE
10 2030 BACTERIAL CHEMOTAXIS//BACTERIAL FLAGELLUM//JOURNAL OF BACTERIOLOGY

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