Class information for:
Level 1: PSYCHROPHILE//COLD ADAPTATION//THERMOPHILIC PROTEIN

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12643 891 46.5 83%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
278 3       CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY 43163
1967 2             GLUTAMATE DEHYDROGENASE//3 ISOPROPYLMALATE DEHYDROGENASE//ISOCITRATE DEHYDROGENASE 5642
12643 1                   PSYCHROPHILE//COLD ADAPTATION//THERMOPHILIC PROTEIN 891

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PSYCHROPHILE authKW 629683 9% 23% 81
2 COLD ADAPTATION authKW 359209 8% 15% 68
3 THERMOPHILIC PROTEIN authKW 252326 2% 41% 18
4 PROTEIN THERMOSTABILITY authKW 227180 2% 30% 22
5 PSYCHROPHILIC ENZYME authKW 194934 2% 36% 16
6 VIBRIO PROTEINASE authKW 137078 0% 100% 4
7 EXTREMOPHILE address 137054 2% 25% 16
8 THERMOSTABILITY authKW 122158 10% 4% 89
9 SYSTEMATICAL ANALYSIS authKW 109661 0% 80% 4
10 PSEUDOALTEROMONAS HALOPLANKTIS TAC125 authKW 104942 1% 44% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 5608 64% 0% 574
2 Biophysics 2281 19% 0% 169
3 Biotechnology & Applied Microbiology 914 15% 0% 131
4 Biochemical Research Methods 660 10% 0% 88
5 Microbiology 556 12% 0% 104
6 Mathematical & Computational Biology 442 4% 0% 39
7 Computer Science, Interdisciplinary Applications 115 4% 0% 33
8 Biology 93 4% 0% 32
9 Evolutionary Biology 33 2% 0% 15
10 Crystallography 26 2% 0% 19

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EXTREMOPHILE 137054 2% 25% 16
2 CHEM B6 82098 2% 11% 21
3 BIOMODELING BIOINFORMAT BIOPROC 65897 1% 38% 5
4 CHEM B6A 63776 1% 17% 11
5 NORWEGIAN STRUCT BIOL 63342 2% 13% 14
6 INTERDIPARTIMENTALE RIC ANAL MODELLI INFORM 47589 1% 28% 5
7 ARCHITECTURE FONCT MACROMOL BIOLUPR 9039 34269 0% 100% 1
8 BANLING BEST MED 34269 0% 100% 1
9 BILVOET BIOMOL 34269 0% 100% 1
10 BIOCHEM NADA KU 34269 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EXTREMOPHILES 20354 3% 2% 29
2 PROTEIN ENGINEERING 6654 2% 1% 21
3 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 5457 4% 1% 32
4 PROTEIN SCIENCE 4245 3% 0% 28
5 BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS 3912 2% 1% 19
6 BMC STRUCTURAL BIOLOGY 3338 1% 1% 7
7 PROTEIN ENGINEERING DESIGN & SELECTION 3282 1% 1% 10
8 JOURNAL OF MOLECULAR BIOLOGY 2922 5% 0% 45
9 JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS 2774 2% 1% 16
10 JOURNAL OF MOLECULAR GRAPHICS & MODELLING 1161 1% 0% 8

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PSYCHROPHILE 629683 9% 23% 81 Search PSYCHROPHILE Search PSYCHROPHILE
2 COLD ADAPTATION 359209 8% 15% 68 Search COLD+ADAPTATION Search COLD+ADAPTATION
3 THERMOPHILIC PROTEIN 252326 2% 41% 18 Search THERMOPHILIC+PROTEIN Search THERMOPHILIC+PROTEIN
4 PROTEIN THERMOSTABILITY 227180 2% 30% 22 Search PROTEIN+THERMOSTABILITY Search PROTEIN+THERMOSTABILITY
5 PSYCHROPHILIC ENZYME 194934 2% 36% 16 Search PSYCHROPHILIC+ENZYME Search PSYCHROPHILIC+ENZYME
6 VIBRIO PROTEINASE 137078 0% 100% 4 Search VIBRIO+PROTEINASE Search VIBRIO+PROTEINASE
7 THERMOSTABILITY 122158 10% 4% 89 Search THERMOSTABILITY Search THERMOSTABILITY
8 SYSTEMATICAL ANALYSIS 109661 0% 80% 4 Search SYSTEMATICAL+ANALYSIS Search SYSTEMATICAL+ANALYSIS
9 PSEUDOALTEROMONAS HALOPLANKTIS TAC125 104942 1% 44% 7 Search PSEUDOALTEROMONAS+HALOPLANKTIS+TAC125 Search PSEUDOALTEROMONAS+HALOPLANKTIS+TAC125
10 LOCAL STRUCTURAL ENTROPY 102808 0% 100% 3 Search LOCAL+STRUCTURAL+ENTROPY Search LOCAL+STRUCTURAL+ENTROPY

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 SIDDIQUI, KS , CAVICCHIOLI, R , (2006) COLD-ADAPTED ENZYMES.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 75. ISSUE . P. 403 -433 82 53% 304
2 STRUVAY, C , FELLER, G , (2012) OPTIMIZATION TO LOW TEMPERATURE ACTIVITY IN PSYCHROPHILIC ENZYMES.INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES. VOL. 13. ISSUE 9. P. 11643-11665 66 65% 56
3 FELLER, G , (2010) PROTEIN STABILITY AND ENZYME ACTIVITY AT EXTREME BIOLOGICAL TEMPERATURES.JOURNAL OF PHYSICS-CONDENSED MATTER. VOL. 22. ISSUE 32. P. - 51 63% 56
4 FELLER, G , GERDAY, C , (2003) PSYCHROPHILIC ENZYMES: HOT TOPICS IN COLD ADAPTATION.NATURE REVIEWS MICROBIOLOGY. VOL. 1. ISSUE 3. P. 200 -208 48 56% 445
5 SANTIAGO, M , RAMIREZ-SARMIENTO, CA , ZAMORA, RA , PARRA, LP , (2016) DISCOVERY, MOLECULAR MECHANISMS, AND INDUSTRIAL APPLICATIONS OF COLD-ACTIVE ENZYMES.FRONTIERS IN MICROBIOLOGY. VOL. 7. ISSUE . P. - 89 31% 0
6 KUMAR, V , YEDAVALLI, P , GUPTA, V , RAO, NM , (2014) ENGINEERING LIPASE A FROM MESOPHILIC BACILLUS SUBTILIS FOR ACTIVITY AT LOW TEMPERATURES.PROTEIN ENGINEERING DESIGN & SELECTION. VOL. 27. ISSUE 3. P. 73-82 42 60% 6
7 METPALLY, RPR , REDDY, BVB , (2009) COMPARATIVE PROTEOME ANALYSIS OF PSYCHROPHILIC VERSUS MESOPHILIC BACTERIAL SPECIES: INSIGHTS INTO THE MOLECULAR BASIS OF COLD ADAPTATION OF PROTEINS.BMC GENOMICS. VOL. 10. ISSUE . P. - 33 72% 36
8 FELLER, G , (2003) MOLECULAR ADAPTATIONS TO COLD IN PSYCHROPHILIC ENZYMES.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 60. ISSUE 4. P. 648 -662 48 54% 113
9 CAVICCHIOLI, R , CURMI, PMG , SIDDIQUI, KS , THOMAS, T , (2006) PROTEINS FROM PSYCHROPHILES.EXTREMOPHILES. VOL. 35. ISSUE . P. 395 -436 48 57% 3
10 PAPALEO, E , TIBERTI, M , INVERNIZZI, G , PASI, M , RANZANI, V , (2011) MOLECULAR DETERMINANTS OF ENZYME COLD ADAPTATION: COMPARATIVE STRUCTURAL AND COMPUTATIONAL STUDIES OF COLD- AND WARM-ADAPTED ENZYMES.CURRENT PROTEIN & PEPTIDE SCIENCE. VOL. 12. ISSUE 7. P. 657-683 70 33% 9

Classes with closest relation at Level 1


Rank Class id link
1 27408 HALOPHILIC//HALOPHILIC ADAPTATION//PL MOL MICROBIOL
2 15175 STAPHYLOCOCCAL NUCLEASE//THERMODYNAMIC MOLECULAR SWITCH//T4 LYSOZYME
3 15616 COLD SHOCK PROTEIN//GLYCINE RICH RNA BINDING PROTEIN//RNA CHAPERONE
4 11602 GLUTAMYL ENDOPEPTIDASE//SUBTILISIN//INTRAMOLECULAR CHAPERONE
5 25090 2 METHYLCITRIC ACID CYCLE//PROPIONATE METABOLISM//2 METHYLCITRATE SYNTHASE
6 10945 DIRECTED EVOLUTION//DNA SHUFFLING//RANDOM MUTAGENESIS
7 14942 3 ISOPROPYLMALATE DEHYDROGENASE//ISOCITRATE DEHYDROGENASE//ISOPROPYLMALATE DEHYDROGENASE
8 14928 GLUTAMATE DEHYDROGENASE//GLUTAMATE DEHYDROGENASE ISOPROTEINS//CLOSTRIDIUM SYMBIOSUM
9 21813 THERMOLYSIN//NEUTRAL PROTEASE//HALOPHILICITY
10 22175 HISTIDINE BIOSYNTHESIS//BETA ALPHA8 BARREL//INDOLE 3 GLYCEROL PHOSPHATE SYNTHASE

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