Class information for:
Level 3: CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
278 43163 34.5 62%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
278 3       CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY 43163
1584 2             D AMINO ACID OXIDASE//D SERINE//SERINE RACEMASE 7221
1782 2             CORYNEBACTERIUM GLUTAMICUM//DIHYDRODIPICOLINATE SYNTHASE//ASPARTATE KINASE 6365
1967 2             GLUTAMATE DEHYDROGENASE//3 ISOPROPYLMALATE DEHYDROGENASE//ISOCITRATE DEHYDROGENASE 5642
2061 2             GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE//PHOSPHOFRUCTOKINASE//PHOSPHOGLYCERATE MUTASE 5293
2391 2             RARE SUGAR//TRANSKETOLASE//L ARABINOSE ISOMERASE 4239
2596 2             ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//ACTA CRYSTALLOGRAPHICA SECTION A//ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY 3611
2622 2             TRIOSEPHOSPHATE ISOMERASE//HISTIDINE BIOSYNTHESIS//KETOSTEROID ISOMERASE 3550
3021 2             SHIKIMATE PATHWAY//CHORISMATE MUTASE//ANTHRANILATE SYNTHASE 2519
3354 2             DIHYDROFOLATE REDUCTASE//HPPK//DHFR 1711
3408 2             ADENYLATE KINASE//PHOSPHOGLYCERATE KINASE//CHIM STRUCT MACROMOL 1603
3519 2             NM23//NUCLEOSIDE DIPHOSPHATE KINASE//NM23 H1 1409

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 CORYNEBACTERIUM GLUTAMICUM authKW 262762 1% 69% 539
2 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY journal 167749 2% 23% 1026
3 BIOCHEMISTRY & MOLECULAR BIOLOGY WoSSC 147296 49% 1% 21103
4 D AMINO ACID OXIDASE authKW 139316 1% 76% 260
5 NM23 authKW 134007 1% 79% 240
6 D SERINE authKW 132995 1% 64% 296
7 NUCLEOSIDE DIPHOSPHATE KINASE authKW 118217 0% 81% 208
8 SERINE RACEMASE authKW 67283 0% 89% 107
9 BIOCHEMISTRY journal 65354 5% 4% 2271
10 PYRIDOXAL 5 PHOSPHATE authKW 64229 1% 39% 236

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 147296 49% 1% 21103
2 Biophysics 55846 14% 2% 5973
3 Crystallography 27435 7% 1% 3185
4 Biochemical Research Methods 18271 8% 1% 3333
5 Biotechnology & Applied Microbiology 13772 9% 1% 3855
6 Microbiology 13300 9% 1% 3747
7 Plant Sciences 2499 5% 0% 2153
8 Chemistry, Organic 1872 5% 0% 2036
9 Chemistry, Medicinal 1568 3% 0% 1115
10 Cell Biology 1493 5% 0% 2243

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 RARE SUGAR 45878 0% 77% 85
2 BIOTECHNOL 1 29254 0% 41% 101
3 IBG BIOTECHNOL 1 19009 0% 41% 66
4 EXTREMOPHILE 17606 0% 63% 40
5 CHAIR GENET PROKARYOTES 17148 0% 81% 30
6 BIOCHEM 15158 6% 1% 2375
7 CHIM STRUCT MACROMOL 14201 0% 61% 33
8 GENOMFOR 13487 0% 64% 30
9 SYNCHROTRON RADIAT SECT 10983 0% 29% 54
10 PROGRAM BIOINFORMAT SYST BIOL 10492 0% 36% 42

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY 167749 2% 23% 1026
2 BIOCHEMISTRY 65354 5% 4% 2271
3 ACTA CRYSTALLOGRAPHICA SECTION A 61214 1% 20% 446
4 ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY 54471 1% 25% 312
5 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 30059 1% 12% 364
6 EUROPEAN JOURNAL OF BIOCHEMISTRY 18260 2% 4% 738
7 JOURNAL OF BIOLOGICAL CHEMISTRY 16323 5% 1% 2039
8 JOURNAL OF BACTERIOLOGY 16022 2% 3% 907
9 ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS 15747 1% 4% 636
10 ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES 14909 0% 13% 165

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CORYNEBACTERIUM GLUTAMICUM 262762 1% 69% 539 Search CORYNEBACTERIUM+GLUTAMICUM Search CORYNEBACTERIUM+GLUTAMICUM
2 D AMINO ACID OXIDASE 139316 1% 76% 260 Search D+AMINO+ACID+OXIDASE Search D+AMINO+ACID+OXIDASE
3 NM23 134007 1% 79% 240 Search NM23 Search NM23
4 D SERINE 132995 1% 64% 296 Search D+SERINE Search D+SERINE
5 NUCLEOSIDE DIPHOSPHATE KINASE 118217 0% 81% 208 Search NUCLEOSIDE+DIPHOSPHATE+KINASE Search NUCLEOSIDE+DIPHOSPHATE+KINASE
6 SERINE RACEMASE 67283 0% 89% 107 Search SERINE+RACEMASE Search SERINE+RACEMASE
7 PYRIDOXAL 5 PHOSPHATE 64229 1% 39% 236 Search PYRIDOXAL+5+PHOSPHATE Search PYRIDOXAL+5+PHOSPHATE
8 D AMINO ACID 59682 0% 42% 200 Search D+AMINO+ACID Search D+AMINO+ACID
9 TRIOSEPHOSPHATE ISOMERASE 57140 0% 56% 145 Search TRIOSEPHOSPHATE+ISOMERASE Search TRIOSEPHOSPHATE+ISOMERASE
10 ALDOLASE 54700 0% 47% 165 Search ALDOLASE Search ALDOLASE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ADAMS, PD , AFONINE, PV , BUNKOCZI, G , CHEN, VB , DAVIS, IW , ECHOLS, N , HEADD, JJ , HUNG, LW , KAPRAL, GJ , GROSSE-KUNSTLEVE, RW , ET AL (2010) PHENIX: A COMPREHENSIVE PYTHON-BASED SYSTEM FOR MACROMOLECULAR STRUCTURE SOLUTION.ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY. VOL. 66. ISSUE . P. 213 -221 53 79% 6352
2 WINN, MD , BALLARD, CC , COWTAN, KD , DODSON, EJ , EMSLEY, P , EVANS, PR , KEEGAN, RM , KRISSINEL, EB , LESLIE, AGW , MCCOY, A , ET AL (2011) OVERVIEW OF THE CCP4 SUITE AND CURRENT DEVELOPMENTS.ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY. VOL. 67. ISSUE . P. 235 -242 41 93% 3889
3 GUO, F , BERGLUND, P , (2017) TRANSAMINASE BIOCATALYSIS: OPTIMIZATION AND APPLICATION.GREEN CHEMISTRY. VOL. 19. ISSUE 2. P. 333 -360 163 88% 0
4 AFONINE, PV , GROSSE-KUNSTLEVE, RW , ECHOLS, N , HEADD, JJ , MORIARTY, NW , MUSTYAKIMOV, M , TERWILLIGER, TC , URZHUMTSEV, A , ZWART, PH , ADAMS, PD , (2012) TOWARDS AUTOMATED CRYSTALLOGRAPHIC STRUCTURE REFINEMENT WITH PHENIX.REFINE.ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY. VOL. 68. ISSUE . P. 352 -367 71 66% 767
5 MCCOY, AJ , GROSSE-KUNSTLEVE, RW , ADAMS, PD , WINN, MD , STORONI, LC , READ, RJ , (2007) PHASER CRYSTALLOGRAPHIC SOFTWARE.JOURNAL OF APPLIED CRYSTALLOGRAPHY. VOL. 40. ISSUE . P. 658-674 35 78% 6771
6 TOYODA, K , INUI, M , (2016) REGULONS OF GLOBAL TRANSCRIPTION FACTORS IN CORYNEBACTERIUM GLUTAMICUM.APPLIED MICROBIOLOGY AND BIOTECHNOLOGY. VOL. 100. ISSUE 1. P. 45 -60 138 76% 2
7 BRASEN, C , ESSER, D , RAUCH, B , SIEBERS, B , (2014) CARBOHYDRATE METABOLISM IN ARCHAEA: CURRENT INSIGHTS INTO UNUSUAL ENZYMES AND PATHWAYS AND THEIR REGULATION.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 78. ISSUE 1. P. 89 -175 229 42% 34
8 BENTLEY, R , (1990) THE SHIKIMATE PATHWAY - A METABOLIC TREE WITH MANY BRANCHES.CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. VOL. 25. ISSUE 5. P. 307-384 269 62% 453
9 LEE, JY , NA, YA , KIM, E , LEE, HS , KIM, P , (2016) THE ACTINOBACTERIUM CORYNEBACTERIUM GLUTAMICUM, AN INDUSTRIAL WORKHORSE.JOURNAL OF MICROBIOLOGY AND BIOTECHNOLOGY. VOL. 26. ISSUE 5. P. 807 -822 134 88% 0
10 MAEDA, H , DUDAREVA, N , (2012) THE SHIKIMATE PATHWAY AND AROMATIC AMINO ACID BIOSYNTHESIS IN PLANTS.ANNUAL REVIEW OF PLANT BIOLOGY, VOL 63. VOL. 63. ISSUE . P. 73-105 120 63% 165

Classes with closest relation at Level 3


Rank Class id link
1 219 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN FOLDING//PROTEIN STRUCTURE PREDICTION
2 239 LIPASE//JOURNAL OF MOLECULAR CATALYSIS B-ENZYMATIC//BIOCATALYSIS
3 408 CHIM BIOINORGAN//POLO SCI//CARBONIC ANHYDRASE
4 103 O GLCNACYLATION//O GLCNAC TRANSFERASE//O GLCNACASE
5 697 LYSYL OXIDASE//SULFOTRANSFERASE//PYRROLOQUINOLINE QUINONE
6 631 KYNURENINE//NEOPTERIN//INDOLEAMINE 2 3 DIOXYGENASE
7 630 HEPATIC ENCEPHALOPATHY//ASYMMETRIC DIMETHYLARGININE//HYPERAMMONEMIA
8 33 JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY
9 389 PEROXISOME//CARNITINE//JOURNAL OF INHERITED METABOLIC DISEASE
10 599 THERMOCHIMICA ACTA//APPARENT EQUILIBRIUM CONSTANTS//JOURNAL OF THERMAL ANALYSIS AND CALORIMETRY

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