Class information for:
Level 2: ADENYLATE KINASE//PHOSPHOGLYCERATE KINASE//CHIM STRUCT MACROMOL

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3408 1603 32.2 57%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
278 3       CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY 43163
3408 2             ADENYLATE KINASE//PHOSPHOGLYCERATE KINASE//CHIM STRUCT MACROMOL 1603
15518 1                   ADENYLATE KINASE//CHIM STRUCT MACROMOL//THYMIDYLATE KINASE 708
20583 1                   PHOSPHOGLYCERATE KINASE//PHOSPHOGLYCERATE KINASE DEFICIENCY//PGK1 453
20867 1                   ADSORBING PROCESS//ATP UTILIZING ENZYMES//LC ILCJP 442

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ADENYLATE KINASE authKW 766787 7% 36% 111
2 PHOSPHOGLYCERATE KINASE authKW 415260 4% 38% 57
3 CHIM STRUCT MACROMOL address 361165 2% 59% 32
4 THYMIDYLATE KINASE authKW 321727 2% 68% 25
5 NUCLEOSIDE MONOPHOSPHATE KINASE authKW 250203 1% 77% 17
6 PHOSPHOGLYCERATE KINASE DEFICIENCY authKW 190472 1% 100% 10
7 UMP KINASE authKW 171419 1% 75% 12
8 THYMIDINE MONOPHOSPHATE KINASE authKW 140253 1% 82% 9
9 UMP CMP KINASE authKW 121899 0% 80% 8
10 URIDYLATE KINASE authKW 116662 0% 88% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 9693 63% 0% 1014
2 Biophysics 2397 15% 0% 237
3 Biochemical Research Methods 244 5% 0% 81
4 Chemistry, Medicinal 117 3% 0% 53
5 Chemistry, Organic 112 5% 0% 88
6 Chemistry, Multidisciplinary 109 8% 0% 136
7 Cell Biology 100 6% 0% 99
8 Genetics & Heredity 70 4% 0% 68
9 Biology 32 2% 0% 32
10 Chemistry, Inorganic & Nuclear 14 2% 0% 35

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHIM STRUCT MACROMOL 361165 2% 59% 32
2 ENZYMOL PL MICROBIOL 85709 0% 75% 6
3 FRE 2852 CNRS 38094 0% 100% 2
4 UNITE CHIM ORGAN 37461 1% 9% 21
5 URA2128 33857 0% 44% 4
6 1450 E DUARTE RD 25395 0% 67% 2
7 LC ILCJP 25395 0% 67% 2
8 MOL PHARMACOL DRUG DISCOVERY SECT 25395 0% 67% 2
9 FFW 19833 0% 21% 5
10 AFFILIATED LI ZE MIDDLE 19047 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 BIOCHEMISTRY 9835 10% 0% 167
2 EUROPEAN JOURNAL OF BIOCHEMISTRY 5477 5% 0% 76
3 MAGNETIC RESONANCE IN BIOLOGY 3808 0% 20% 1
4 INORGANIC BIOCHEMISTRY 2379 0% 13% 1
5 ADVANCES IN ENZYMOLOGY AND RELATED AREAS OF MOLECULAR BIOLOGY 2319 0% 3% 4
6 JOURNAL OF BIOLOGICAL CHEMISTRY 1832 8% 0% 126
7 PROTEIN ENGINEERING 1191 1% 1% 12
8 JOURNAL OF MOLECULAR BIOLOGY 1119 2% 0% 38
9 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 1044 1% 0% 19
10 BIOORGANIC CHEMISTRY 1031 1% 1% 9

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ADENYLATE KINASE 766787 7% 36% 111 Search ADENYLATE+KINASE Search ADENYLATE+KINASE
2 PHOSPHOGLYCERATE KINASE 415260 4% 38% 57 Search PHOSPHOGLYCERATE+KINASE Search PHOSPHOGLYCERATE+KINASE
3 THYMIDYLATE KINASE 321727 2% 68% 25 Search THYMIDYLATE+KINASE Search THYMIDYLATE+KINASE
4 NUCLEOSIDE MONOPHOSPHATE KINASE 250203 1% 77% 17 Search NUCLEOSIDE+MONOPHOSPHATE+KINASE Search NUCLEOSIDE+MONOPHOSPHATE+KINASE
5 PHOSPHOGLYCERATE KINASE DEFICIENCY 190472 1% 100% 10 Search PHOSPHOGLYCERATE+KINASE+DEFICIENCY Search PHOSPHOGLYCERATE+KINASE+DEFICIENCY
6 UMP KINASE 171419 1% 75% 12 Search UMP+KINASE Search UMP+KINASE
7 THYMIDINE MONOPHOSPHATE KINASE 140253 1% 82% 9 Search THYMIDINE+MONOPHOSPHATE+KINASE Search THYMIDINE+MONOPHOSPHATE+KINASE
8 UMP CMP KINASE 121899 0% 80% 8 Search UMP+CMP+KINASE Search UMP+CMP+KINASE
9 URIDYLATE KINASE 116662 0% 88% 7 Search URIDYLATE+KINASE Search URIDYLATE+KINASE
10 ATP AMP PHOSPHOTRANSFERASE 76189 0% 100% 4 Search ATP+AMP+PHOSPHOTRANSFERASE Search ATP+AMP+PHOSPHOTRANSFERASE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 VARGA, A , FLACHNER, B , GRACZER, E , OSVATH, S , SZILAGYI, AN , VAS, M , (2005) CORRELATION BETWEEN CONFORMATIONAL STABILITY OF THE TERNARY ENZYME-SUBSTRATE COMPLEX AND DOMAIN CLOSURE OF 3-PHOSPHOGLYCERATE KINASE.FEBS JOURNAL. VOL. 272. ISSUE 8. P. 1867 -1885 69 85% 22
2 KREJCOVA, R , HORSKA, K , (1997) ADENYLATE KINASES.CHEMICKE LISTY. VOL. 91. ISSUE 3. P. 179-188 84 92% 0
3 CHIARELLI, LR , MORERA, SM , BIANCHI, P , FERMO, E , ZANELLA, A , GALIZZI, A , VALENTINI, G , (2012) MOLECULAR INSIGHTS ON PATHOGENIC EFFECTS OF MUTATIONS CAUSING PHOSPHOGLYCERATE KINASE DEFICIENCY.PLOS ONE. VOL. 7. ISSUE 2. P. - 40 89% 15
4 ECKSTEIN, F , (1985) NUCLEOSIDE PHOSPHOROTHIOATES.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 54. ISSUE . P. 367-402 89 55% 823
5 CUI, Q , SHIN, WS , LUO, Y , TIAN, J , CUI, H , YIN, D , (2013) THYMIDYLATE KINASE: AN OLD TOPIC BRINGS NEW PERSPECTIVES.CURRENT MEDICINAL CHEMISTRY. VOL. 20. ISSUE 10. P. 1286-1305 49 63% 7
6 VAS, M , VARGA, A , GRACZER, E , (2010) INSIGHT INTO THE MECHANISM OF DOMAIN MOVEMENTS AND THEIR ROLE IN ENZYME FUNCTION: EXAMPLE OF 3-PHOSPHOGLYCERATE KINASE.CURRENT PROTEIN & PEPTIDE SCIENCE. VOL. 11. ISSUE 2. P. 118-147 55 53% 16
7 KRISHNAMURTHY, H , LOU, HF , KIMPLE, A , VIEILLE, C , CUKIER, RI , (2005) ASSOCIATIVE MECHANISM FOR PHOSPHORYL TRANSFER: A MOLECULAR DYNAMICS SIMULATION OF ESCHERICHIA COLI ADENYLATE KINASE COMPLEXED WITH ITS SUBSTRATES.PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS. VOL. 58. ISSUE 1. P. 88-100 41 80% 29
8 TSAI, MD , YAN, HG , (1991) MECHANISM OF ADENYLATE KINASE .11. MECHANISM OF ADENYLATE KINASE - SITE-DIRECTED MUTAGENESIS VERSUS X-RAY AND NMR.BIOCHEMISTRY. VOL. 30. ISSUE 28. P. 6806-6818 52 90% 94
9 VAN CALENBERGH, S , POCHET, S , MUNIER-LEHMANN, H , (2012) DRUG DESIGN AND IDENTIFICATION OF POTENT LEADS AGAINST MYCOBACTERIUM TUBERCULOSIS THYMIDINE MONOPHOSPHATE KINASE.CURRENT TOPICS IN MEDICINAL CHEMISTRY. VOL. 12. ISSUE 7. P. 694-705 33 73% 19
10 MIKOULINSKAIA, GV , TARAN, SA , SKOBLOV, YS , FEOFANOV, SA , (2013) THE STUDY OF THE BACTERIOPHAGE T5 DEOXYNUCLEOSIDE MONOPHOSPHATE KINASE ACTIVE SITE BY SITE-DIRECTED MUTAGENESIS.RUSSIAN JOURNAL OF BIOORGANIC CHEMISTRY. VOL. 39. ISSUE 6. P. 607-618 33 77% 0

Classes with closest relation at Level 2


Rank Class id link
1 3519 NM23//NUCLEOSIDE DIPHOSPHATE KINASE//NM23 H1
2 2061 GLYCERALDEHYDE 3 PHOSPHATE DEHYDROGENASE//PHOSPHOFRUCTOKINASE//PHOSPHOGLYCERATE MUTASE
3 2023 ATP SYNTHASE//F 1 ATPASE//MITOCHONDRIAL CARRIER
4 2612 WARBURG EFFECT//PKM2//PYRUVATE KINASE
5 2341 RIBONUCLEOTIDE REDUCTASE//POLG//HYDROXYUREA
6 3350 VDAC//VOLTAGE DEPENDENT ANION CHANNEL//HEXOKINASE
7 1967 GLUTAMATE DEHYDROGENASE//3 ISOPROPYLMALATE DEHYDROGENASE//ISOCITRATE DEHYDROGENASE
8 3581 PHOSPHOENOLPYRUVATE CARBOXYKINASE//GLYCERONEOGENESIS//BROWN ADIPOSE TISSUE HEMIDENERVATION
9 4012 N PHOSPHORYL AMINO ACID//BIOORGAN PHOSPHORUS CHEM//PHOSPHOPEPTIDE SYNTHESIS
10 1067 ANGIOGENIN//RIBONUCLEASE//MOLTEN GLOBULE

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