Class information for:
Level 1: PHOSPHOGLYCERATE KINASE//PHOSPHOGLYCERATE KINASE DEFICIENCY//PGK1

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
20583 453 34.3 62%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
278 3       CORYNEBACTERIUM GLUTAMICUM//ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY//BIOCHEMISTRY & MOLECULAR BIOLOGY 43163
3408 2             ADENYLATE KINASE//PHOSPHOGLYCERATE KINASE//CHIM STRUCT MACROMOL 1603
20583 1                   PHOSPHOGLYCERATE KINASE//PHOSPHOGLYCERATE KINASE DEFICIENCY//PGK1 453

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PHOSPHOGLYCERATE KINASE authKW 1418623 12% 38% 56
2 PHOSPHOGLYCERATE KINASE DEFICIENCY authKW 674060 2% 100% 10
3 PGK1 authKW 240723 2% 36% 10
4 3 PHOSPHOGLYCERATE KINASE authKW 172548 2% 32% 8
5 HINGE BENDING authKW 151650 2% 25% 9
6 HUMAN PGK authKW 134812 0% 100% 2
7 YEAST PHOSPHOGLYCERATE KINASE authKW 134812 0% 100% 2
8 PGK2 authKW 101106 1% 50% 3
9 1450 E DUARTE RD address 89873 0% 67% 2
10 PGK authKW 83667 1% 21% 6

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 2686 63% 0% 284
2 Biophysics 891 17% 0% 76
3 Genetics & Heredity 196 10% 0% 45
4 Cell Biology 87 9% 0% 41
5 Biochemical Research Methods 62 5% 0% 22
6 Hematology 49 4% 0% 18
7 Developmental Biology 38 2% 0% 10
8 Biology 26 3% 0% 13
9 Reproductive Biology 23 2% 0% 8
10 Clinical Neurology 8 4% 0% 16

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 1450 E DUARTE RD 89873 0% 67% 2
2 BECKMAN INT CHEMPHYS BIOCHEM SECT 67406 0% 100% 1
3 BIOCHIMIE BIOPHYS MOL CELLULAIRE 67406 0% 100% 1
4 BIOLCS69033 67406 0% 100% 1
5 BIOQUIM CIENCIAS BIOLIAL 67406 0% 100% 1
6 BRUGMANN UNIV HOSP CHU BRUGMANN 67406 0% 100% 1
7 CASE COURRIER 1705 67406 0% 100% 1
8 CHIM SUBST NAT RMN 67406 0% 100% 1
9 CNRSCPBSUMR 5236 67406 0% 100% 1
10 COGNIT SCI BIOINFORMAT 67406 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 EUROPEAN JOURNAL OF BIOCHEMISTRY 4397 8% 0% 36
2 BIOCHEMISTRY 3000 11% 0% 49
3 PROTEIN ENGINEERING 1895 2% 0% 8
4 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 841 2% 0% 9
5 BIOFIZIKA 779 2% 0% 7
6 PROTEINS-STRUCTURE FUNCTION AND GENETICS 603 0% 0% 2
7 JAPANESE JOURNAL OF HUMAN GENETICS 522 0% 0% 2
8 PROTEIN SCIENCE 515 2% 0% 7
9 ACTA CHEMICA SCANDINAVICA SERIES B-ORGANIC CHEMISTRY AND BIOCHEMISTRY 501 1% 0% 3
10 ISOZYMES-CURRENT TOPICS IN BIOLOGICAL AND MEDICAL RESEARCH 473 0% 1% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PHOSPHOGLYCERATE KINASE 1418623 12% 38% 56 Search PHOSPHOGLYCERATE+KINASE Search PHOSPHOGLYCERATE+KINASE
2 PHOSPHOGLYCERATE KINASE DEFICIENCY 674060 2% 100% 10 Search PHOSPHOGLYCERATE+KINASE+DEFICIENCY Search PHOSPHOGLYCERATE+KINASE+DEFICIENCY
3 PGK1 240723 2% 36% 10 Search PGK1 Search PGK1
4 3 PHOSPHOGLYCERATE KINASE 172548 2% 32% 8 Search 3+PHOSPHOGLYCERATE+KINASE Search 3+PHOSPHOGLYCERATE+KINASE
5 HINGE BENDING 151650 2% 25% 9 Search HINGE+BENDING Search HINGE+BENDING
6 HUMAN PGK 134812 0% 100% 2 Search HUMAN+PGK Search HUMAN+PGK
7 YEAST PHOSPHOGLYCERATE KINASE 134812 0% 100% 2 Search YEAST+PHOSPHOGLYCERATE+KINASE Search YEAST+PHOSPHOGLYCERATE+KINASE
8 PGK2 101106 1% 50% 3 Search PGK2 Search PGK2
9 PGK 83667 1% 21% 6 Search PGK Search PGK
10 3 PHOSPHO D GLYCERATE KINASE 67406 0% 100% 1 Search 3+PHOSPHO+D+GLYCERATE+KINASE Search 3+PHOSPHO+D+GLYCERATE+KINASE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 VARGA, A , FLACHNER, B , GRACZER, E , OSVATH, S , SZILAGYI, AN , VAS, M , (2005) CORRELATION BETWEEN CONFORMATIONAL STABILITY OF THE TERNARY ENZYME-SUBSTRATE COMPLEX AND DOMAIN CLOSURE OF 3-PHOSPHOGLYCERATE KINASE.FEBS JOURNAL. VOL. 272. ISSUE 8. P. 1867 -1885 69 85% 22
2 CHIARELLI, LR , MORERA, SM , BIANCHI, P , FERMO, E , ZANELLA, A , GALIZZI, A , VALENTINI, G , (2012) MOLECULAR INSIGHTS ON PATHOGENIC EFFECTS OF MUTATIONS CAUSING PHOSPHOGLYCERATE KINASE DEFICIENCY.PLOS ONE. VOL. 7. ISSUE 2. P. - 40 89% 15
3 TAMAI, M , KAWANO, T , SAITO, R , SAKURAI, K , SAITO, Y , YAMADA, H , IDA, H , AKIYAMA, M , (2014) PHOSPHOGLYCERATE KINASE DEFICIENCY DUE TO A NOVEL MUTATION (C. 1180A > G) MANIFESTING AS CHRONIC HEMOLYTIC ANEMIA IN A JAPANESE BOY.INTERNATIONAL JOURNAL OF HEMATOLOGY. VOL. 100. ISSUE 4. P. 393 -397 24 100% 1
4 SPIEGEL, R , GOMEZ, EA , AKMAN, HO , KRISHNA, S , HOROVITZ, Y , DIMAURO, S , (2009) MYOPATHIC FORM OF PHOSPHOGLYCERATE KINASE (PGK) DEFICIENCY: A NEW CASE AND PATHOGENIC CONSIDERATIONS.NEUROMUSCULAR DISORDERS. VOL. 19. ISSUE 3. P. 207-211 27 96% 16
5 FLACHNER, B , VARGA, A , SZABO, J , BARNA, L , HAJDU, I , GYIMESI, G , ZAVODSZKY, P , VAS, M , (2005) SUBSTRATE-ASSISTED MOVEMENT OF THE CATALYTIC LYS 215 DURING DOMAIN CLOSURE: SITE-DIRECTED MUTAGENESIS STUDIES OF HUMAN 3-PHOSPHOGLYCERATE KINASE.BIOCHEMISTRY. VOL. 44. ISSUE 51. P. 16853-16865 42 66% 23
6 FERMO, E , BIANCHI, P , CHIARELLI, LR , MAGGI, M , MANDARA, GML , VERCELLATI, C , MARCELLO, AP , BARCELLINI, W , CORTELEZZI, A , VALENTINI, G , ET AL (2012) A NEW VARIANT OF PHOSPHOGLYCERATE KINASE DEFICIENCY (P.I371K) WITH MULTIPLE TISSUE INVOLVEMENT: MOLECULAR AND FUNCTIONAL CHARACTERIZATION.MOLECULAR GENETICS AND METABOLISM. VOL. 106. ISSUE 4. P. 455 -461 27 77% 6
7 VAS, M , VARGA, A , GRACZER, E , (2010) INSIGHT INTO THE MECHANISM OF DOMAIN MOVEMENTS AND THEIR ROLE IN ENZYME FUNCTION: EXAMPLE OF 3-PHOSPHOGLYCERATE KINASE.CURRENT PROTEIN & PEPTIDE SCIENCE. VOL. 11. ISSUE 2. P. 118-147 47 45% 16
8 BEUTLER, E , (2007) PGK DEFICIENCY.BRITISH JOURNAL OF HAEMATOLOGY. VOL. 136. ISSUE 1. P. 3-11 27 79% 26
9 FLACHNER, B , KOVARI, Z , VARGA, A , GUGOLYA, Z , VONDERVISZT, F , NARAY-SZABO, G , VAS, M , (2004) ROLE OF PHOSPHATE CHAIN MOBILITY OF MGATP IN COMPLETING THE 3-PHOSPHOGLYCERATE KINASE CATALYTIC SITE: BINDING, KINETIC, AND CRYSTALLOGRAPHIC STUDIES WITH ATP AND MGATP.BIOCHEMISTRY. VOL. 43. ISSUE 12. P. 3436 -3449 33 69% 33
10 SZILAGYI, AN , VAS, M , (1998) SEQUENTIAL DOMAIN REFOLDING OF PIG MUSCLE 3-PHOSPHOGLYCERATE KINASE: KINETIC ANALYSIS OF REACTIVATION.FOLDING & DESIGN. VOL. 3. ISSUE 6. P. 565-575 38 69% 12

Classes with closest relation at Level 1


Rank Class id link
1 20867 ADSORBING PROCESS//ATP UTILIZING ENZYMES//LC ILCJP
2 20822 MCARDLES DISEASE//MYOPHOSPHORYLASE//GLYCOGENOSIS TYPE V
3 17636 TRIOSEPHOSPHATE ISOMERASE//TRIOSEPHOSPHATE ISOMERASE DEFICIENCY//BIOQUIM BIOL ESTRUCT
4 25683 PHOSPHOGLYCERATE MUTASE//BISPHOSPHOGLYCERATE MUTASE//2 3 BISPHOSPHOGLYCERATE PHOSPHATASE
5 25775 2 DIMENSIONAL DNA TYPING//ALTERED ENZYME//CI 1009
6 25758 COMPARAT GENOMICS GRP//COMPARAT GENOM GRP//ARC KANGAROO GENOM
7 29800 CXC DOMAIN//TESTIS SPECIFIC GENE//NORPEG
8 21401 HUMAN HYALINE CARTILAGE//PROTEIN MELTING DOMAINS//THERMAL SHIFT ASSAY
9 12643 PSYCHROPHILE//COLD ADAPTATION//THERMOPHILIC PROTEIN
10 5455 MOLTEN GLOBULE//ALPHA LACTALBUMIN//APOMYOGLOBIN

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