Class information for:
Level 1: MACROPINOCYTOSIS//PHAGOSOME//RECYCLING FROM PHAGOSOMES

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
18529 548 54.9 90%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
103 3       O GLCNACYLATION//O GLCNAC TRANSFERASE//O GLCNACASE 73436
3012 2             MANNOSE RECEPTOR//ENDO180//ASIALOGLYCOPROTEIN RECEPTOR 2532
18529 1                   MACROPINOCYTOSIS//PHAGOSOME//RECYCLING FROM PHAGOSOMES 548

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MACROPINOCYTOSIS authKW 383821 8% 16% 44
2 PHAGOSOME authKW 227206 6% 12% 33
3 RECYCLING FROM PHAGOSOMES authKW 125369 1% 75% 3
4 GRP PHAGOSOME BIOL address 116078 1% 42% 5
5 PHAGOCYTOSIS authKW 108034 19% 2% 106
6 MEMBRANE CYTOSKELETON DYNAM GRP address 99494 1% 36% 5
7 SECT EXPT ATHEROSCLEROSIS address 93832 1% 21% 8
8 FLUID PHASE PINOCYTOSIS authKW 74292 0% 67% 2
9 PHAGOCYTIC SYNAPSE authKW 74292 0% 67% 2
10 RAB20 authKW 74292 0% 67% 2

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 5342 50% 0% 275
2 Immunology 1462 26% 0% 141
3 Biochemistry & Molecular Biology 221 20% 0% 112
4 Biochemical Research Methods 148 6% 0% 35
5 Hematology 130 5% 0% 30
6 Biophysics 44 4% 0% 24
7 Microbiology 29 5% 0% 25
8 Medicine, Research & Experimental 23 4% 0% 20
9 Biology 11 2% 0% 11
10 Virology 8 1% 0% 8

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 GRP PHAGOSOME BIOL 116078 1% 42% 5
2 MEMBRANE CYTOSKELETON DYNAM GRP 99494 1% 36% 5
3 SECT EXPT ATHEROSCLEROSIS 93832 1% 21% 8
4 PROGRAMME CELL BIOL 63311 1% 23% 5
5 BIOENGN ELECT COMP ENGN HOME 55720 0% 100% 1
6 BIOMED ENGN HIGH THROUGHPUT BIOL 55720 0% 100% 1
7 CELL BIOL BIOSYST TECHNOL UNIT 55720 0% 100% 1
8 CELL BIOL PROTEOM GRP 55720 0% 100% 1
9 CELL BIOLU567 55720 0% 100% 1
10 CELL MOL CELL BIOL 55720 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF CELL SCIENCE 6471 7% 0% 39
2 MOLECULAR BIOLOGY OF THE CELL 4499 5% 0% 26
3 JOURNAL OF CELL BIOLOGY 4255 6% 0% 35
4 JOURNAL OF LEUKOCYTE BIOLOGY 3506 4% 0% 21
5 TRAFFIC 3495 2% 1% 11
6 TRENDS IN CELL BIOLOGY 1134 1% 0% 6
7 MOLECULAR & CELLULAR PROTEOMICS 874 1% 0% 7
8 CELLULAR MICROBIOLOGY 849 1% 0% 6
9 FRONTIERS IN PHYSIOLOGY 777 1% 0% 6
10 JOURNAL OF IMMUNOLOGY 615 5% 0% 25

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 MACROPINOCYTOSIS 383821 8% 16% 44 Search MACROPINOCYTOSIS Search MACROPINOCYTOSIS
2 PHAGOSOME 227206 6% 12% 33 Search PHAGOSOME Search PHAGOSOME
3 RECYCLING FROM PHAGOSOMES 125369 1% 75% 3 Search RECYCLING+FROM+PHAGOSOMES Search RECYCLING+FROM+PHAGOSOMES
4 PHAGOCYTOSIS 108034 19% 2% 106 Search PHAGOCYTOSIS Search PHAGOCYTOSIS
5 FLUID PHASE PINOCYTOSIS 74292 0% 67% 2 Search FLUID+PHASE+PINOCYTOSIS Search FLUID+PHASE+PINOCYTOSIS
6 PHAGOCYTIC SYNAPSE 74292 0% 67% 2 Search PHAGOCYTIC+SYNAPSE Search PHAGOCYTIC+SYNAPSE
7 RAB20 74292 0% 67% 2 Search RAB20 Search RAB20
8 MICROPINOCYTOSIS 71637 1% 43% 3 Search MICROPINOCYTOSIS Search MICROPINOCYTOSIS
9 ALTERED MEMBRANE DYNAMICS 55720 0% 100% 1 Search ALTERED+MEMBRANE+DYNAMICS Search ALTERED+MEMBRANE+DYNAMICS
10 CONTROLLED LIQUID CHROMATOGRAPHY TANDEM MASS SPECTROMETRY LC MS MS 55720 0% 100% 1 Search CONTROLLED+LIQUID+CHROMATOGRAPHY+TANDEM+MASS+SPECTROMETRY+LC+MS+MS Search CONTROLLED+LIQUID+CHROMATOGRAPHY+TANDEM+MASS+SPECTROMETRY+LC+MS+MS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 SWANSON, JA , (2008) SHAPING CUPS INTO PHAGOSOMES AND MACROPINOSOMES.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 9. ISSUE 8. P. 639 -649 43 42% 281
2 SCHLAM, D , BAGSHAW, RD , FREEMAN, SA , COLLINS, RF , PAWSON, T , FAIRN, GD , GRINSTEIN, S , (2015) PHOSPHOINOSITIDE 3-KINASE ENABLES PHAGOCYTOSIS OF LARGE PARTICLES BY TERMINATING ACTIN ASSEMBLY THROUGH RAC/CDC42 GTPASE-ACTIVATING PROTEINS.NATURE COMMUNICATIONS. VOL. 6. ISSUE . P. - 25 60% 16
3 EGAMI, Y , (2016) MOLECULAR IMAGING ANALYSIS OF RAB GTPASES IN THE REGULATION OF PHAGOCYTOSIS AND MACROPINOCYTOSIS.ANATOMICAL SCIENCE INTERNATIONAL. VOL. 91. ISSUE 1. P. 35 -42 30 54% 1
4 SWANSON, JA , HOPPE, AD , (2004) THE COORDINATION OF SIGNALING DURING FC RECEPTOR-MEDIATED PHAGOCYTOSIS.JOURNAL OF LEUKOCYTE BIOLOGY. VOL. 76. ISSUE 6. P. 1093-1103 44 41% 167
5 NIEDERGANG, F , CHAVRIER, P , (2004) SIGNALING AND MEMBRANE DYNAMICS DURING PHAGOCYTOSIS: MANY ROADS LEAD TO THE PHAGOS(R)OME.CURRENT OPINION IN CELL BIOLOGY. VOL. 16. ISSUE 4. P. 422-428 37 54% 79
6 SWANSON, JA , (2014) PHOSPHOINOSITIDES AND ENGULFMENT.CELLULAR MICROBIOLOGY. VOL. 16. ISSUE 10. P. 1473 -1483 35 43% 7
7 LEVIN, R , GRINSTEIN, S , SCHLAM, D , (2015) PHOSPHOINOSITIDES IN PHAGOCYTOSIS AND MACROPINOCYTOSIS.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS. VOL. 1851. ISSUE 6. P. 805 -823 48 25% 17
8 EGAMI, Y , TAGUCHI, T , MAEKAWA, M , ARAI, H , ARAKI, N , (2014) SMALL GTPASES AND PHOSPHOINOSITIDES IN THE REGULATORY MECHANISMS OF MACROPINOSOME FORMATION AND MATURATION.FRONTIERS IN PHYSIOLOGY. VOL. 5. ISSUE . P. - 35 39% 16
9 FLANNAGAN, RS , JAUMOUILLE, V , GRINSTEIN, S , (2012) THE CELL BIOLOGY OF PHAGOCYTOSIS.ANNUAL REVIEW OF PATHOLOGY: MECHANISMS OF DISEASE, VOL 7. VOL. 7. ISSUE . P. 61-98 48 20% 181
10 GROVES, E , DART, AE , COVARELLI, V , CARON, E , (2008) MOLECULAR MECHANISMS OF PHAGOCYTIC UPTAKE IN MAMMALIAN CELLS.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 65. ISSUE 13. P. 1957 -1976 49 28% 96

Classes with closest relation at Level 1


Rank Class id link
1 36465 NONOXIDATIVE MICROBICIDAL MECHANISM//SOD INHIBITABLE NBT REDUCTION TEST//VACUOLAR INTERCONNECTION
2 31783 CORONIN//CORONIN 1A//CORONIN 1C
3 18799 THIOL REDUCTASE ACTIVITY//CROSS PRESENTATION//INTERFERON GAMMA INDUCIBLE LYSOSOMAL THIOL REDUCTASE
4 3124 FC RECEPTOR//FC GAMMA RECEPTORS//FC GAMMA RECEPTOR
5 36304 SWAP 70//SWITCH ASSOCIATED PROTEIN 70//DEF6
6 8727 APOPTOTIC CELLS//CELL CLEARANCE//PHAGOCYTOSIS
7 7540 PHOSPHOINOSITIDE//PIKFYVE//SECT MOL SIGNAL TRANSDUCT
8 18517 NEUTROPHIL SIGNALLING GRP//LSP1//MICROFILAMENTOUS CYTOSKELETON
9 2031 RAB//RAB PROTEINS//RAB27A
10 2106 MYCOBACTERIUM TUBERCULOSIS//PE_PGRS//TUBERCULOSIS

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