Class information for:
Level 1: UNITE PROTEOMIE FONCTIONNELLE BIOP ERVAT ALIM//ANTI S AUREUS EOS//ANTI S AUREUS PEPTIDES

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
36904 71 35.1 78%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
388 3       TOXICON//ANTIMICROBIAL PEPTIDE//SNAKE VENOM 30875
1162 2             ANTIMICROBIAL PEPTIDE//CATHELICIDIN//DEFENSIN 9437
36904 1                   UNITE PROTEOMIE FONCTIONNELLE BIOP ERVAT ALIM//ANTI S AUREUS EOS//ANTI S AUREUS PEPTIDES 71

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UNITE PROTEOMIE FONCTIONNELLE BIOP ERVAT ALIM address 860160 3% 100% 2
2 ANTI S AUREUS EOS authKW 430080 1% 100% 1
3 ANTI S AUREUS PEPTIDES authKW 430080 1% 100% 1
4 ANTICP authKW 430080 1% 100% 1
5 APOPTOTIC DOMAIN PREDICTION authKW 430080 1% 100% 1
6 ARTMENT MICROBIOL IMMUNOL address 430080 1% 100% 1
7 AVPPRED ALGORITHM authKW 430080 1% 100% 1
8 EROP MOSCOW KNOWLEDGE DATABASE authKW 430080 1% 100% 1
9 HAEMOLYTIC CYTOTOXIC ACTIVITY authKW 430080 1% 100% 1
10 LNVEST QUIM address 430080 1% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 333 56% 0% 40
2 Mathematical & Computational Biology 257 11% 0% 8
3 Biophysics 43 10% 0% 7
4 Microbiology 41 11% 0% 8
5 Biotechnology & Applied Microbiology 40 11% 0% 8
6 Biochemical Research Methods 24 7% 0% 5
7 Multidisciplinary Sciences 16 3% 0% 2
8 Biology 4 3% 0% 2
9 Materials Science, Biomaterials 3 1% 0% 1
10 Infectious Diseases 3 3% 0% 2

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UNITE PROTEOMIE FONCTIONNELLE BIOP ERVAT ALIM 860160 3% 100% 2
2 ARTMENT MICROBIOL IMMUNOL 430080 1% 100% 1
3 LNVEST QUIM 430080 1% 100% 1
4 MICROBIAL INFECT IMMUN ORTHOPED 430080 1% 100% 1
5 OPEN SOURCE DRUG DISCOVERY OSDD UNIT 430080 1% 100% 1
6 MED IMAGING MED CLIN BIOL SMALL ANIM 215039 1% 50% 1
7 NUTRACEUT FUNCT PROTE POTENTIAL BIO ERS TUNIS 215039 1% 50% 1
8 OFFICE CYBER INFRASTRUCT COMPUTAT BIOL 215039 1% 50% 1
9 OSDD UNIT 215039 1% 50% 1
10 ESTUDIO MATEMAT COMPUTAC 143359 1% 33% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NEUROCHEMICAL JOURNAL 3785 3% 0% 2
2 NUCLEIC ACIDS RESEARCH 2458 21% 0% 15
3 PROBIOTICS AND ANTIMICROBIAL PROTEINS 1962 1% 0% 1
4 ACTA BIOCHIMICA POLONICA 1414 4% 0% 3
5 DAIRY SCIENCE & TECHNOLOGY 1003 1% 0% 1
6 PATHOGENS AND DISEASE 973 1% 0% 1
7 BIOFIZIKA 923 4% 0% 3
8 INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS 794 1% 0% 1
9 PROTEIN AND PEPTIDE LETTERS 676 3% 0% 2
10 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 659 1% 0% 1

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 ANTI S AUREUS EOS 430080 1% 100% 1 Search ANTI+S+AUREUS+EOS Search ANTI+S+AUREUS+EOS
2 ANTI S AUREUS PEPTIDES 430080 1% 100% 1 Search ANTI+S+AUREUS+PEPTIDES Search ANTI+S+AUREUS+PEPTIDES
3 ANTICP 430080 1% 100% 1 Search ANTICP Search ANTICP
4 APOPTOTIC DOMAIN PREDICTION 430080 1% 100% 1 Search APOPTOTIC+DOMAIN+PREDICTION Search APOPTOTIC+DOMAIN+PREDICTION
5 AVPPRED ALGORITHM 430080 1% 100% 1 Search AVPPRED+ALGORITHM Search AVPPRED+ALGORITHM
6 EROP MOSCOW KNOWLEDGE DATABASE 430080 1% 100% 1 Search EROP+MOSCOW+KNOWLEDGE+DATABASE Search EROP+MOSCOW+KNOWLEDGE+DATABASE
7 HAEMOLYTIC CYTOTOXIC ACTIVITY 430080 1% 100% 1 Search HAEMOLYTIC+CYTOTOXIC+ACTIVITY Search HAEMOLYTIC+CYTOTOXIC+ACTIVITY
8 MILKAMP DATABASE 430080 1% 100% 1 Search MILKAMP+DATABASE Search MILKAMP+DATABASE
9 MYCOBACTERIUM TUBERCULOSIS BACTERIA VIRULENCE PATHWAY 430080 1% 100% 1 Search MYCOBACTERIUM+TUBERCULOSIS+BACTERIA+VIRULENCE+PATHWAY Search MYCOBACTERIUM+TUBERCULOSIS+BACTERIA+VIRULENCE+PATHWAY
10 PROTEIN RELATEDNESS 430080 1% 100% 1 Search PROTEIN+RELATEDNESS Search PROTEIN+RELATEDNESS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 MATHUR, D , PRAKASH, S , ANAND, P , KAUR, H , AGRAWAL, P , MEHTA, A , KUMAR, R , SINGH, S , RAGHAVA, GPS , (2016) PEPLIFE: A REPOSITORY OF THE HALF-LIFE OF PEPTIDES.SCIENTIFIC REPORTS. VOL. 6. ISSUE . P. - 17 40% 0
2 SINGH, S , CHAUDHARY, K , DHANDA, SK , BHALLA, S , USMANI, SS , GAUTAM, A , TUKNAIT, A , RAGHAVA, GPS , AGRAWAL, P , MATHUR, D , (2016) SATPDB: A DATABASE OF STRUCTURALLY ANNOTATED THERAPEUTIC PEPTIDES.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE D1. P. D1119 -D1126 16 31% 5
3 LIU, SC , FAN, LL , SUN, J , LAO, XZ , ZHENG, H , (2017) COMPUTATIONAL RESOURCES AND TOOLS FOR ANTIMICROBIAL PEPTIDES.JOURNAL OF PEPTIDE SCIENCE. VOL. 23. ISSUE 1. P. 4 -12 18 25% 0
4 AGUILERA-MENDOZA, L , MARRERO-PONCE, Y , TELLEZ-IBARRA, R , LLORENTE-QUESADA, MT , SALGADO, J , BARIGYE, SJ , LIU, J , (2015) OVERLAP AND DIVERSITY IN ANTIMICROBIAL PEPTIDE DATABASES: COMPILING A NON-REDUNDANT SET OF SEQUENCES.BIOINFORMATICS. VOL. 31. ISSUE 15. P. 2553 -2559 11 31% 7
5 FAN, LL , SUN, J , ZHOU, MF , ZHOU, J , LAO, XZ , ZHENG, H , XU, HM , (2016) DRAMP: A COMPREHENSIVE DATA REPOSITORY OF ANTIMICROBIAL PEPTIDES.SCIENTIFIC REPORTS. VOL. 6. ISSUE . P. - 10 32% 1
6 SHARMA, A , SINGLA, D , RASHID, M , RAGHAVA, GPS , (2014) DESIGNING OF PEPTIDES WITH DESIRED HALF-LIFE IN INTESTINE-LIKE ENVIRONMENT.BMC BIOINFORMATICS. VOL. 15. ISSUE . P. - 13 26% 6
7 GOGOLADZE, G , GRIGOLAVA, M , VISHNEPOLSKY, B , CHUBINIDZE, M , DUROUX, P , LEFRANC, MP , PIRTSKHALAVA, M , (2014) DBAASP: DATABASE OF ANTIMICROBIAL ACTIVITY AND STRUCTURE OF PEPTIDES.FEMS MICROBIOLOGY LETTERS. VOL. 357. ISSUE 1. P. 63 -68 7 39% 16
8 PIRTSKHALAVA, M , GABRIELIAN, A , CRUZ, P , GRIGGS, HL , SQUIRES, RB , HURT, DE , GRIGOLAVA, M , CHUBINIDZE, M , GOGOLADZE, G , VISHNEPOLSKY, B , ET AL (2016) DBAASP V.2: AN ENHANCED DATABASE OF STRUCTURE AND ANTIMICROBIAL/CYTOTOXIC ACTIVITY OF NATURAL AND SYNTHETIC PEPTIDES.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE D1. P. D1104 -D1112 8 30% 2
9 CHAUDHARY, K , KUMAR, R , SINGH, S , TUKNAIT, A , GAUTAM, A , MATHUR, D , ANAND, P , VARSHNEY, GC , RAGHAVA, GPS , (2016) A WEB SERVER AND MOBILE APP FOR COMPUTING HEMOLYTIC POTENCY OF PEPTIDES.SCIENTIFIC REPORTS. VOL. 6. ISSUE . P. - 8 24% 1
10 LEE, HT , LEE, CC , YANG, JR , LAI, JZC , CHANG, KY , (2015) A LARGE-SCALE STRUCTURAL CLASSIFICATION OF ANTIMICROBIAL PEPTIDES.BIOMED RESEARCH INTERNATIONAL. VOL. . ISSUE . P. - 7 29% 2

Classes with closest relation at Level 1


Rank Class id link
1 210 ANTIMICROBIAL PEPTIDE//FROG SKIN//TEMPORIN
2 26233 PLECTASIN//JIANGSU SUPERMOL MED MAT PLICAT//FUSION EXPRESSION
3 9416 PLANT DEFENSIN//ANTIFUNGAL PROTEIN//THIONIN
4 2741 PSEUDO AMINO ACID COMPOSITION//PROTEIN STRUCTURAL CLASS//JACKKNIFE TEST
5 13046 PHAGE DISPLAY//IN VIVO PHAGE DISPLAY//NGR HTNF
6 31840 N TUPLE CLASSIFIER//SIGMA PI//RAM NETS
7 36538 CARDIAC HORMONE//CARDIAC HORMONES//VESSEL DILATOR
8 2061 CELL PENETRATING PEPTIDE//PROTEIN TRANSDUCTION DOMAIN//PROTEIN TRANSDUCTION
9 24117 EVOLUTIONARY BIOINFORMAT//FOLD SUPERFAMILY//EVOLUTION OF DOMAIN ARCHITECTURE
10 32729 ONCOCIN//APIDAECIN//PROLINE RICH ANTIMICROBIAL PEPTIDES

Go to start page