Class information for:
Level 1: POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
8466 1250 47.8 87%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
8466 1                   POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE 1250

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 POLYADENYLATION authKW 922150 11% 27% 142
2 ALTERNATIVE POLYADENYLATION authKW 716614 5% 45% 65
3 POLYA POLYMERASE authKW 352674 3% 38% 38
4 POLYA SITE authKW 323291 1% 88% 15
5 MRNA 3 END PROCESSING authKW 246300 1% 92% 11
6 3 END PROCESSING authKW 246207 2% 40% 25
7 3 END FORMATION authKW 238288 2% 49% 20
8 CLEAVAGE AND POLYADENYLATION authKW 219834 1% 75% 12
9 PRE MRNA 3 END PROCESSING authKW 219834 1% 75% 12
10 CLEAVAGE STIMULATION FACTOR authKW 146560 0% 100% 6

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 9264 69% 0% 868
2 Cell Biology 7809 41% 0% 508
3 Genetics & Heredity 1529 16% 0% 195
4 Developmental Biology 613 5% 0% 60
5 Biotechnology & Applied Microbiology 266 8% 0% 95
6 Virology 120 3% 0% 36
7 Mathematical & Computational Biology 116 2% 0% 26
8 Biophysics 46 3% 0% 42
9 Biochemical Research Methods 40 3% 0% 36
10 Plant Sciences 19 3% 0% 43

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MINIST EDUC COSTAL WETLAND ECOSYST 122133 0% 100% 5
2 P ANIKOLAOU 79936 0% 55% 6
3 P ANIKOLAOU ONCOL 55829 0% 57% 4
4 INSERM ERM 206 48853 0% 100% 2
5 CELL ACTIVAT GENE EXP S GRP 36637 0% 50% 3
6 BIOZENTRUM CELL BIOL 32568 0% 67% 2
7 DIGNA BIOTECH 32568 0% 67% 2
8 STATE BIOCONTROLGUANGDONG PROV P 31402 0% 43% 3
9 BARTHOLIN BLDG 24427 0% 100% 1
10 BIOCHEM LIFE SCISTATE BIOCONTRO 24427 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR AND CELLULAR BIOLOGY 21171 11% 1% 139
2 WILEY INTERDISCIPLINARY REVIEWS-RNA 13018 1% 4% 14
3 RNA-A PUBLICATION OF THE RNA SOCIETY 10121 2% 2% 23
4 NUCLEIC ACIDS RESEARCH 9877 10% 0% 127
5 RNA 9820 3% 1% 32
6 GENES & DEVELOPMENT 7506 4% 1% 48
7 EMBO JOURNAL 5780 5% 0% 64
8 MOLECULAR CELL 5436 3% 1% 35
9 GENOME RESEARCH 2536 1% 1% 12
10 CELL 2304 3% 0% 38

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 POLYADENYLATION 922150 11% 27% 142 Search POLYADENYLATION Search POLYADENYLATION
2 ALTERNATIVE POLYADENYLATION 716614 5% 45% 65 Search ALTERNATIVE+POLYADENYLATION Search ALTERNATIVE+POLYADENYLATION
3 POLYA POLYMERASE 352674 3% 38% 38 Search POLYA+POLYMERASE Search POLYA+POLYMERASE
4 POLYA SITE 323291 1% 88% 15 Search POLYA+SITE Search POLYA+SITE
5 MRNA 3 END PROCESSING 246300 1% 92% 11 Search MRNA+3+END+PROCESSING Search MRNA+3+END+PROCESSING
6 3 END PROCESSING 246207 2% 40% 25 Search 3+END+PROCESSING Search 3+END+PROCESSING
7 3 END FORMATION 238288 2% 49% 20 Search 3+END+FORMATION Search 3+END+FORMATION
8 CLEAVAGE AND POLYADENYLATION 219834 1% 75% 12 Search CLEAVAGE+AND+POLYADENYLATION Search CLEAVAGE+AND+POLYADENYLATION
9 PRE MRNA 3 END PROCESSING 219834 1% 75% 12 Search PRE+MRNA+3+END+PROCESSING Search PRE+MRNA+3+END+PROCESSING
10 CLEAVAGE STIMULATION FACTOR 146560 0% 100% 6 Search CLEAVAGE+STIMULATION+FACTOR Search CLEAVAGE+STIMULATION+FACTOR

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ZHAO, J , HYMAN, L , MOORE, C , (1999) FORMATION OF MRNA 3 ' ENDS IN EUKARYOTES: MECHANISM, REGULATION, AND INTERRELATIONSHIPS WITH OTHER STEPS IN MRNA SYNTHESIS.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 63. ISSUE 2. P. 405 -+ 221 46% 692
2 XIANG, KH , TONG, L , MANLEY, JL , (2014) DELINEATING THE STRUCTURAL BLUEPRINT OF THE PRE-MRNA 3 '-END PROCESSING MACHINERY.MOLECULAR AND CELLULAR BIOLOGY. VOL. 34. ISSUE 11. P. 1894-1910 143 74% 12
3 MANDEL, CR , BAI, Y , TONG, L , (2008) PROTEIN FACTORS IN PRE-MRNA 3'-END PROCESSING.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 65. ISSUE 7-8. P. 1099-1122 141 64% 200
4 TIAN, B , GRABER, JH , (2012) SIGNALS FOR PRE-MRNA CLEAVAGE AND POLYADENYLATION.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 3. ISSUE 3. P. 385 -396 88 91% 39
5 MILLEVOI, S , VAGNER, S , (2010) MOLECULAR MECHANISMS OF EUKARYOTIC PRE-MRNA 3' END PROCESSING REGULATION.NUCLEIC ACIDS RESEARCH. VOL. 38. ISSUE 9. P. 2757 -2774 111 62% 160
6 PROUDFOOT, NJ , (2011) ENDING THE MESSAGE: POLY(A) SIGNALS THEN AND NOW.GENES & DEVELOPMENT. VOL. 25. ISSUE 17. P. 1770 -1782 80 69% 205
7 OGORODNIKOV, A , KARGAPOLOVA, Y , DANCKWARDT, S , (2016) PROCESSING AND TRANSCRIPTOME EXPANSION AT THE MRNA 3' END IN HEALTH AND DISEASE: FINDING THE RIGHT END.PFLUGERS ARCHIV-EUROPEAN JOURNAL OF PHYSIOLOGY. VOL. 468. ISSUE 6. P. 993 -1012 110 59% 0
8 SHI, YS , MANLEY, JL , (2015) THE END OF THE MESSAGE: MULTIPLE PROTEIN-RNA INTERACTIONS DEFINE THE MRNA POLYADENYLATION SITE.GENES & DEVELOPMENT. VOL. 29. ISSUE 9. P. 889 -897 69 66% 23
9 CHAN, S , CHOI, EA , SHI, YS , (2011) PRE-MRNA 3 '-END PROCESSING COMPLEX ASSEMBLY AND FUNCTION.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 2. ISSUE 3. P. 321-335 81 73% 43
10 TIAN, B , MANLEY, JL , (2013) ALTERNATIVE CLEAVAGE AND POLYADENYLATION: THE LONG AND SHORT OF IT.TRENDS IN BIOCHEMICAL SCIENCES. VOL. 38. ISSUE 6. P. 312 -320 67 65% 84

Classes with closest relation at Level 1


Rank Class id link
1 17891 RRP6//MRNP BIOGENESIS METAB//DIS3
2 5889 P TEFB//CDK9//RNA POLYMERASE II
3 11961 CYTOPLASMIC POLYADENYLATION//CPEB//POLYA BINDING PROTEIN
4 24494 OCULOPHARYNGEAL MUSCULAR DYSTROPHY//PABPN1//OPMD
5 16463 MRNA EXPORT//NXF1//THO COMPLEX
6 28145 INTRON MEDIATED ENHANCEMENT//INTRON//IME
7 13709 HNRNP B1//HNRNP A2 B1//U1A
8 36452 RBBP6//RETINOBLASTOMA BINDING PROTEIN 6//SAFB
9 32852 POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR//P54NRB//NONO
10 7407 HISTONE MRNA//HISTONE GENES//HISTONE GENE EXPRESSION

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