Class information for:
Level 1: POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR//P54NRB//NONO

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
32852 133 45.9 95%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
32852 1                   POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR//P54NRB//NONO 133

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR authKW 918363 3% 100% 4
2 P54NRB authKW 885554 7% 43% 9
3 NONO authKW 590369 5% 43% 6
4 P 450 CHOLESTEROL SIDE CHAIN CLEAVAGE authKW 459181 2% 100% 2
5 P54NRB NONO authKW 459181 2% 100% 2
6 PTB ASSOCIATED SPLICING FACTOR authKW 459181 2% 100% 2
7 PSF authKW 265735 10% 9% 13
8 150 KDA authKW 229591 1% 100% 1
9 55 KDA NUCLEAR MATRIX PROTEIN authKW 229591 1% 100% 1
10 55 KDA NUCLEAR PROTEIN authKW 229591 1% 100% 1

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Biochemistry & Molecular Biology 720 60% 0% 80
2 Cell Biology 674 37% 0% 49
3 Biochemical Research Methods 66 8% 0% 11
4 Biophysics 43 8% 0% 10
5 Genetics & Heredity 29 8% 0% 10
6 Endocrinology & Metabolism 28 7% 0% 9
7 Developmental Biology 23 3% 0% 4
8 Oncology 19 8% 0% 11
9 Crystallography 10 3% 0% 4
10 Physiology 8 4% 0% 5

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CNRSUNITE MIXTE RECH 6543 229591 1% 100% 1
2 CNRSUNITE MIXTE RECH CEA 217 229591 1% 100% 1
3 DNA CHIP GRP 229591 1% 100% 1
4 ECOLE NORMALE SUPERCNRSINSERM 229591 1% 100% 1
5 FUNCT GENOM BIOINFORMATMINIST EDUC 229591 1% 100% 1
6 HUMAN GENOM JIANGSU PROVINCE 229591 1% 100% 1
7 IMAGINE NECKER ENFANTS MALAD HOSP 229591 1% 100% 1
8 INTEGRAT RODENT PHYSIOL 229591 1% 100% 1
9 MOL IMAGING FUNCT PHARMACOL GRP 229591 1% 100% 1
10 NEUROSCI ITALIAN COUNCIL 229591 1% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 NUCLEIC ACIDS RESEARCH 1479 12% 0% 16
2 RNA 810 2% 0% 3
3 MOLECULAR AND CELLULAR BIOLOGY 652 6% 0% 8
4 WILEY INTERDISCIPLINARY REVIEWS-RNA 624 1% 0% 1
5 JOURNAL OF GENETICS AND GENOMICS 386 1% 0% 1
6 MOLECULAR ENDOCRINOLOGY 363 2% 0% 3
7 AMERICAN JOURNAL OF PHYSIOLOGY-ENDOCRINOLOGY AND METABOLISM 314 2% 0% 3
8 DIAGNOSTIC MOLECULAR PATHOLOGY 292 1% 0% 1
9 AGING-US 252 1% 0% 1
10 MOLECULAR BIOLOGY OF THE CELL 244 2% 0% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR 918363 3% 100% 4 Search POLYPYRIMIDINE+TRACT+BINDING+PROTEIN+ASSOCIATED+SPLICING+FACTOR Search POLYPYRIMIDINE+TRACT+BINDING+PROTEIN+ASSOCIATED+SPLICING+FACTOR
2 P54NRB 885554 7% 43% 9 Search P54NRB Search P54NRB
3 NONO 590369 5% 43% 6 Search NONO Search NONO
4 P 450 CHOLESTEROL SIDE CHAIN CLEAVAGE 459181 2% 100% 2 Search P+450+CHOLESTEROL+SIDE+CHAIN+CLEAVAGE Search P+450+CHOLESTEROL+SIDE+CHAIN+CLEAVAGE
5 P54NRB NONO 459181 2% 100% 2 Search P54NRB+NONO Search P54NRB+NONO
6 PTB ASSOCIATED SPLICING FACTOR 459181 2% 100% 2 Search PTB+ASSOCIATED+SPLICING+FACTOR Search PTB+ASSOCIATED+SPLICING+FACTOR
7 PSF 265735 10% 9% 13 Search PSF Search PSF
8 150 KDA 229591 1% 100% 1 Search 150+KDA Search 150+KDA
9 55 KDA NUCLEAR MATRIX PROTEIN 229591 1% 100% 1 Search 55+KDA+NUCLEAR+MATRIX+PROTEIN Search 55+KDA+NUCLEAR+MATRIX+PROTEIN
10 55 KDA NUCLEAR PROTEIN 229591 1% 100% 1 Search 55+KDA+NUCLEAR+PROTEIN Search 55+KDA+NUCLEAR+PROTEIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 KNOTT, GJ , BOND, CS , FOX, AH , (2016) THE DBHS PROTEINS SFPQ, NONO AND PSPC1: A MULTIPURPOSE MOLECULAR SCAFFOLD.NUCLEIC ACIDS RESEARCH. VOL. 44. ISSUE 9. P. 3989 -4004 77 46% 3
2 KNOTT, GJ , LEE, M , PASSON, DM , FOX, AH , BOND, CS , (2015) CAENORHABDITIS ELEGANS NONO-1: INSIGHTS INTO DBHS PROTEIN STRUCTURE, ARCHITECTURE, AND FUNCTION.PROTEIN SCIENCE. VOL. 24. ISSUE 12. P. 2033 -2043 24 55% 1
3 LEE, AR , HUNG, W , XIE, N , LIU, LL , HE, LY , DONG, XS , (2017) TYROSINE RESIDUES REGULATE MULTIPLE NUCLEAR FUNCTIONS OF P54NRB.JOURNAL OF CELLULAR PHYSIOLOGY. VOL. 232. ISSUE 4. P. 852 -861 22 58% 0
4 YAROSH, CA , IACONA, JR , LUTZ, CS , LYNCH, KW , (2015) PSF: NUCLEAR BUSY-BODY OR NUCLEAR FACILITATOR?.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 6. ISSUE 4. P. 351 -367 34 30% 7
5 LU, JY , SEWER, MB , (2015) P54(NRB)/NONO REGULATES CYCLIC AMP-DEPENDENT GLUCOCORTICOID PRODUCTION BY MODULATING PHOSPHODIESTERASE MRNA SPLICING AND DEGRADATION.MOLECULAR AND CELLULAR BIOLOGY. VOL. 35. ISSUE 7. P. 1223 -1237 22 46% 6
6 LIU, LL , XIE, N , RENNIE, P , CHALLIS, JRG , GLEAVE, M , LYE, SJ , DONG, XS , (2011) CONSENSUS PP1 BINDING MOTIFS REGULATE TRANSCRIPTIONAL COREPRESSION AND ALTERNATIVE RNA SPLICING ACTIVITIES OF THE STEROID RECEPTOR COREGULATORS, P54NRB AND PSF.MOLECULAR ENDOCRINOLOGY. VOL. 25. ISSUE 7. P. 1197-1210 25 46% 9
7 LI, SY , LI, ZT , SHU, FJ , XIONG, HR , PHILLIPS, AC , DYNAN, WS , (2014) DOUBLE-STRAND BREAK REPAIR DEFICIENCY IN NONO KNOCKOUT MURINE EMBRYONIC FIBROBLASTS AND COMPENSATION BY SPONTANEOUS UPREGULATION OF THE PSPC1 PARALOG.NUCLEIC ACIDS RESEARCH. VOL. 42. ISSUE 15. P. 9771 -9780 20 50% 10
8 HUANG, CJ , DAS, U , XIE, WJ , DUCASSE, M , TUCKER, HO , (2016) ALTERED STOICHIOMETRY AND NUCLEAR DELOCALIZATION OF NONO AND PSF PROMOTE CELLULAR SENESCENCE.AGING-US. VOL. 8. ISSUE 12. P. 3356 -+ 27 37% 0
9 KNOTT, GJ , PANJIKAR, S , THORN, A , FOX, AH , CONTE, MR , LEE, M , BOND, CS , (2016) A CRYSTALLOGRAPHIC STUDY OF HUMAN NONO (P54(NRB)): OVERCOMING PATHOLOGICAL PROBLEMS WITH PURIFICATION, DATA COLLECTION AND NONCRYSTALLOGRAPHIC SYMMETRY.ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY. VOL. 72. ISSUE . P. 761 -769 22 40% 0
10 HA, K , TAKEDA, Y , DYNAN, WS , (2011) SEQUENCES IN PSF/SFPQ MEDIATE RADIORESISTANCE AND RECRUITMENT OF PSF/SFPQ-CONTAINING COMPLEXES TO DNA DAMAGE SITES IN HUMAN CELLS.DNA REPAIR. VOL. 10. ISSUE 3. P. 252 -259 18 47% 20

Classes with closest relation at Level 1


Rank Class id link
1 21858 VL30//INTRACISTERNAL A PARTICLE//INTRACISTERNAL A TYPE PARTICLES
2 11597 RNA EDITING//ADAR//ADAR1
3 13709 HNRNP B1//HNRNP A2 B1//U1A
4 37024 RAB23//CARPENTER SYNDROME//ACROCEPHALOPOLYSYNDACTYLY TYPE II
5 357 LONG NONCODING RNAS//LNCRNA//LONG NONCODING RNA
6 5889 P TEFB//CDK9//RNA POLYMERASE II
7 22145 NUCLEAR ACTIN//ACTIN RELATED PROTEIN//NUCLEAR MYOSIN I
8 785 SR PROTEINS//ALTERNATIVE SPLICING//POLYPYRIMIDINE TRACT BINDING PROTEIN
9 28466 CELL SIGNALING METAB//SALT INDUCIBLE KINASE//SALT INDUCIBLE KINASE 1
10 8466 POLYADENYLATION//ALTERNATIVE POLYADENYLATION//POLYA POLYMERASE

Go to start page