Class information for:
Level 2: PLANT SCIENCES//ARABIDOPSIS//PLANT CELL

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
135 23819 51.2 82%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
3 4 PLANT SCIENCES//AGRONOMY//FOOD SCIENCE & TECHNOLOGY 1882812
7 3       PLANT SCIENCES//PLANT PHYSIOLOGY//ARABIDOPSIS 149859
135 2             PLANT SCIENCES//ARABIDOPSIS//PLANT CELL 23819
1855 1                   MIR156//MICRORNA//MIRNA 2456
1875 1                   AUXIN//AUXIN TRANSPORT//POLAR AUXIN TRANSPORT 2448
1956 1                   PHRAGMOPLAST//CORTICAL MICROTUBULES//PREPROPHASE BAND 2407
1973 1                   MADS BOX//MADS BOX GENES//FLOWER DEVELOPMENT 2402
2503 1                   POLLEN TUBE//GENERATIVE CELL//EGG CELL 2225
4373 1                   MSAP//RDDM//RNA DIRECTED DNA METHYLATION 1796
5204 1                   CONSTANS//FLOWERING LOCUS T//FLORIGEN 1657
5303 1                   LEAF DEVELOPMENT//COMPOUND LEAF//KNOX GENES 1643
7396 1                   FLOWERING LOCUS C//FLC//VERNALIZATION 1371
8952 1                   ENDOREDUPLICATION//PLANT CELL CYCLE//ENDOPOLYPLOIDY 1201
9517 1                   TAPETUM//MALE STERILITY//ANTHER DEVELOPMENT 1148
11321 1                   WUSCHEL//CLAVATA//CLE PEPTIDE 991
15162 1                   ENDOSPERM//TRANSFER CELLS//WALL INGROWTHS 728
19871 1                   ROOT HAIR//TRICHOMES//CAPRICE 485
21517 1                   PHYSCOMITRELLA PATENS//PROTONEMA//PHYSCOMITRELLA PATENS HEDWBSG 415
25280 1                   CYCLOIDEA//FLORAL SYMMETRY//RADIALIS 286
30989 1                   CHEMICALLY INDUCIBLE GENE EXPRESSION//ALC SWITCH//ALC SYSTEM 160

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 PLANT SCIENCES WoSSC 520856 64% 3% 15280
2 ARABIDOPSIS authKW 461983 7% 23% 1606
3 PLANT CELL journal 362768 5% 22% 1301
4 ARABIDOPSIS THALIANA authKW 270388 5% 18% 1209
5 AUXIN authKW 249841 3% 25% 799
6 FLOWER DEVELOPMENT authKW 243079 1% 58% 326
7 PLANT JOURNAL journal 242023 5% 16% 1171
8 FLOWERING TIME authKW 191657 1% 44% 339
9 MADS BOX authKW 185186 1% 75% 194
10 PLANT SYST BIOL address 168382 2% 30% 441

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Plant Sciences 520856 64% 3% 15280
2 Cell Biology 46885 24% 1% 5679
3 Biochemistry & Molecular Biology 23013 29% 0% 6811
4 Developmental Biology 18632 6% 1% 1419
5 Genetics & Heredity 16960 12% 1% 2925
6 Horticulture 1946 2% 1% 413
7 Evolutionary Biology 1661 2% 0% 512
8 Biotechnology & Applied Microbiology 1510 5% 0% 1167
9 Reproductive Biology 827 2% 0% 361
10 Biology 780 2% 0% 560

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 PLANT SYST BIOL 168382 2% 30% 441
2 PLANT BIOL 84849 4% 6% 1066
3 PLANT CELL BIOL 79987 1% 26% 242
4 ZURICH BASEL PLANT SCI 78204 1% 43% 143
5 PLANT GENE EXP S 76484 1% 38% 159
6 PLANT BIOTECHNOL GENET 68643 1% 45% 120
7 PLANT MOL GENET 64945 1% 22% 228
8 PLANT INTEGRAT BIOL 60435 0% 51% 92
9 PLANT SCI 57473 5% 4% 1139
10 BOT PLANT SCI 57173 1% 16% 286

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 PLANT CELL 362768 5% 22% 1301
2 PLANT JOURNAL 242023 5% 16% 1171
3 CURRENT OPINION IN PLANT BIOLOGY 154588 2% 26% 461
4 SEXUAL PLANT REPRODUCTION 135305 1% 35% 303
5 PROTOPLASMA 113571 3% 15% 599
6 PLANT PHYSIOLOGY 74137 5% 5% 1114
7 JOURNAL OF EXPERIMENTAL BOTANY 63199 3% 7% 714
8 FRONTIERS IN PLANT SCIENCE 57982 2% 10% 476
9 PLANT AND CELL PHYSIOLOGY 55883 2% 8% 553
10 PLANT MOLECULAR BIOLOGY 52951 2% 8% 530

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class		 LCSH search Wikipedia search
1 ARABIDOPSIS 461983 7% 23% 1606 Search ARABIDOPSIS Search ARABIDOPSIS
2 ARABIDOPSIS THALIANA 270388 5% 18% 1209 Search ARABIDOPSIS+THALIANA Search ARABIDOPSIS+THALIANA
3 AUXIN 249841 3% 25% 799 Search AUXIN Search AUXIN
4 FLOWER DEVELOPMENT 243079 1% 58% 326 Search FLOWER+DEVELOPMENT Search FLOWER+DEVELOPMENT
5 FLOWERING TIME 191657 1% 44% 339 Search FLOWERING+TIME Search FLOWERING+TIME
6 MADS BOX 185186 1% 75% 194 Search MADS+BOX Search MADS+BOX
7 POLLEN TUBE 168223 1% 48% 272 Search POLLEN+TUBE Search POLLEN+TUBE
8 MADS BOX GENES 160345 1% 91% 138 Search MADS+BOX+GENES Search MADS+BOX+GENES
9 MERISTEM 149854 1% 50% 233 Search MERISTEM Search MERISTEM
10 AUXIN TRANSPORT 134062 1% 71% 148 Search AUXIN+TRANSPORT Search AUXIN+TRANSPORT

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 SMACZNIAK, C , IMMINK, RGH , ANGENENT, GC , KAUFMANN, K , (2012) DEVELOPMENTAL AND EVOLUTIONARY DIVERSITY OF PLANT MADS-DOMAIN FACTORS: INSIGHTS FROM RECENT STUDIES.DEVELOPMENT. VOL. 139. ISSUE 17. P. 3081-3098 211 87% 100
2 MATZKE, MA , MOSHER, RA , (2014) RNA-DIRECTED DNA METHYLATION: AN EPIGENETIC PATHWAY OF INCREASING COMPLEXITY.NATURE REVIEWS GENETICS. VOL. 15. ISSUE 6. P. 394 -408 128 85% 185
3 FERRANDIZ, C , FOURQUIN, C , PRUNET, N , SCUTT, CP , SUNDBERG, E , TREHIN, C , VIALETTE-GUIRAUD, ACM , (2010) CARPEL DEVELOPMENT.ADVANCES IN BOTANICAL RESEARCH, VOL 55. VOL. 55. ISSUE . P. 1 -73 262 86% 17
4 WEIJERS, D , WAGNER, D , (2016) TRANSCRIPTIONAL RESPONSES TO THE AUXIN HORMONE.ANNUAL REVIEW OF PLANT BIOLOGY, VOL 67. VOL. 67. ISSUE . P. 539 -574 185 83% 5
5 LI, C , ZHANG, BH , (2016) MICRORNAS IN CONTROL OF PLANT DEVELOPMENT.JOURNAL OF CELLULAR PHYSIOLOGY. VOL. 231. ISSUE 2. P. 303 -313 150 77% 13
6 ZHANG, BH , WANG, QL , (2015) MICRORNA-BASED BIOTECHNOLOGY FOR PLANT IMPROVEMENT.JOURNAL OF CELLULAR PHYSIOLOGY. VOL. 230. ISSUE 1. P. 1 -15 184 79% 21
7 KALVE, S , DE VOS, D , BEEMSTER, GTS , (2014) LEAF DEVELOPMENT: A CELLULAR PERSPECTIVE.FRONTIERS IN PLANT SCIENCE. VOL. 5. ISSUE . P. - 209 78% 24
8 IRISH, VF , (2010) THE FLOWERING OF ARABIDOPSIS FLOWER DEVELOPMENT.PLANT JOURNAL. VOL. 61. ISSUE 6. P. 1014 -1028 192 91% 73
9 WILS, CR , KAUFMANN, K , (2017) GENE-REGULATORY NETWORKS CONTROLLING INFLORESCENCE AND FLOWER DEVELOPMENT IN ARABIDOPSIS THALIANA.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1860. ISSUE 1. P. 95 -105 193 91% 0
10 GAN, ES , HUANG, JB , ITO, T , (2013) FUNCTIONAL ROLES OF HISTONE MODIFICATION, CHROMATIN REMODELING AND MICRORNAS IN ARABIDOPSIS FLOWER DEVELOPMENT.INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY, VOL 305. VOL. 305. ISSUE . P. 115-161 198 84% 9

Classes with closest relation at Level 2


Rank Class id link
1 2289 PHYTOCHROME//PHOTOTROPIN//PHOTOMORPHOGENESIS
2 1025 CYTOKININ//GIBBERELLIN//ABSCISIC ACID
3 2094 TRANSPOSABLE ELEMENTS//RETROTRANSPOSON//LTR RETROTRANSPOSON
4 1259 PECTIN//XYLOGLUCAN//ARABINOGALACTAN PROTEIN
5 2157 GRAVITROPISM//AQUAPORIN//ENDODERMIS
6 1480 MOLECULAR FARMING//EDIBLE VACCINE//SEED STORAGE PROTEIN
7 88 PLANT SCIENCES//SALICYLIC ACID//JASMONIC ACID
8 914 GUARD CELL//PLANT SCIENCES//PLANT PHYSIOLOGY
9 2518 AMERICAN FERN JOURNAL//FERNS//PTERIDOPHYTES
10 2635 STRIGOLACTONE//PARASITIC WEEDS//STRIGA HERMONTHICA

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