Class information for:
Level 2: QUORUM SENSING//PSEUDOMONAS AERUGINOSA//N ACYL HOMOSERINE LACTONE

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
910 11236 43.1 77%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
910 2             QUORUM SENSING//PSEUDOMONAS AERUGINOSA//N ACYL HOMOSERINE LACTONE 11236
559 1                   QUORUM SENSING//N ACYL HOMOSERINE LACTONE//QUORUM QUENCHING 3310
6304 1                   C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP 1502
6539 1                   ALGINATE LYASE//ALGINATE//ALGINATE OLIGOSACCHARIDES 1472
9823 1                   PSEUDOMONAS AERUGINOSA//PSEUDOMONAS VACCINE//RD BIOSCI 1117
10314 1                   EXOU//EXOS//EXOENZYME S 1074
10725 1                   PSEUDOMONAS AERUGINOSA//OE 6710//LIVERPOOL EPIDEMIC STRAIN 1040
12199 1                   TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY 925
23959 1                   ANTI ADHESIN VACCINE//ANTI ADHESION VACCINE//ASIALO GM1 GLYCOLIPID 328
25293 1                   VIOLACEIN//CHROMOBACTERIUM VIOLACEUM//CHROMOBACTERIUM 285
29578 1                   BACTERIA STREPTOCOCCUS PNEUMONIAE//ENZYMES XANTHINE OXIDASE//GNEOM MED 183

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 QUORUM SENSING authKW 1613394 10% 55% 1075
2 PSEUDOMONAS AERUGINOSA authKW 722233 12% 20% 1306
3 N ACYL HOMOSERINE LACTONE authKW 449658 2% 87% 190
4 QUORUM QUENCHING authKW 358438 1% 85% 155
5 ALGINATE LYASE authKW 303280 1% 85% 132
6 VIOLACEIN authKW 228020 1% 90% 93
7 ACYL HOMOSERINE LACTONE authKW 225531 1% 84% 99
8 AUTOINDUCER authKW 188218 1% 67% 104
9 QUORUM SENSING INHIBITORS authKW 163675 1% 84% 72
10 CHROMOBACTERIUM VIOLACEUM authKW 158179 1% 69% 85

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Microbiology 138127 46% 1% 5194
2 Infectious Diseases 14277 11% 0% 1262
3 Biotechnology & Applied Microbiology 6754 12% 0% 1308
4 Immunology 5413 12% 0% 1364
5 Biochemistry & Molecular Biology 4386 20% 0% 2268
6 Respiratory System 484 2% 0% 262
7 Biochemical Research Methods 483 3% 0% 357
8 Chemistry, Applied 349 2% 0% 277
9 Chemistry, Medicinal 214 2% 0% 236
10 Biophysics 134 2% 0% 274

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 BIOMED MICROBIOL 47435 0% 45% 39
2 BASIC PL MOL BIOTECHNOL 44290 0% 41% 40
3 NAT SCI SCI EDUC AG 43990 0% 90% 18
4 INGN SYST MACROMOL 41834 0% 28% 55
5 SING ORE ENVIRONM LIFE SCI ENGN 37394 1% 21% 65
6 UPR9027 32840 0% 55% 22
7 COSTERTON BIOFILM 30567 0% 43% 26
8 MARINE BIOFOULING BIOINNOVAT 29881 0% 29% 38
9 MICROBIOL 24620 10% 1% 1174
10 INFORMAT SCI HUMAN INFORMAT 22996 0% 71% 12

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 JOURNAL OF BACTERIOLOGY 71999 8% 3% 943
2 MOLECULAR MICROBIOLOGY 41925 4% 4% 431
3 INFECTION AND IMMUNITY 31491 5% 2% 561
4 MICROBIOLOGY-SGM 17360 2% 3% 226
5 ENVIRONMENTAL MICROBIOLOGY 9886 1% 3% 119
6 BMC MICROBIOLOGY 5534 1% 3% 80
7 FEMS MICROBIOLOGY LETTERS 5187 2% 1% 179
8 JOURNAL OF MEDICAL MICROBIOLOGY 4954 1% 2% 105
9 APPLIED AND ENVIRONMENTAL MICROBIOLOGY 4556 2% 1% 233
10 PATHOGENS AND DISEASE 3802 0% 6% 25

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class		 LCSH search Wikipedia search
1 QUORUM SENSING 1613394 10% 55% 1075 Search QUORUM+SENSING Search QUORUM+SENSING
2 PSEUDOMONAS AERUGINOSA 722233 12% 20% 1306 Search PSEUDOMONAS+AERUGINOSA Search PSEUDOMONAS+AERUGINOSA
3 N ACYL HOMOSERINE LACTONE 449658 2% 87% 190 Search N+ACYL+HOMOSERINE+LACTONE Search N+ACYL+HOMOSERINE+LACTONE
4 QUORUM QUENCHING 358438 1% 85% 155 Search QUORUM+QUENCHING Search QUORUM+QUENCHING
5 ALGINATE LYASE 303280 1% 85% 132 Search ALGINATE+LYASE Search ALGINATE+LYASE
6 VIOLACEIN 228020 1% 90% 93 Search VIOLACEIN Search VIOLACEIN
7 ACYL HOMOSERINE LACTONE 225531 1% 84% 99 Search ACYL+HOMOSERINE+LACTONE Search ACYL+HOMOSERINE+LACTONE
8 AUTOINDUCER 188218 1% 67% 104 Search AUTOINDUCER Search AUTOINDUCER
9 QUORUM SENSING INHIBITORS 163675 1% 84% 72 Search QUORUM+SENSING+INHIBITORS Search QUORUM+SENSING+INHIBITORS
10 CHROMOBACTERIUM VIOLACEUM 158179 1% 69% 85 Search CHROMOBACTERIUM+VIOLACEUM Search CHROMOBACTERIUM+VIOLACEUM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 ROMLING, U , GALPERIN, MY , GOMELSKY, M , (2013) CYCLIC DI-GMP: THE FIRST 25 YEARS OF A UNIVERSAL BACTERIAL SECOND MESSENGER.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 77. ISSUE 1. P. 1 -52 291 65% 352
2 GRANDCLEMENT, C , TANNIERES, M , MORERA, S , DESSAUX, Y , FAURE, D , (2016) QUORUM QUENCHING: ROLE IN NATURE AND APPLIED DEVELOPMENTS.FEMS MICROBIOLOGY REVIEWS. VOL. 40. ISSUE 1. P. 86 -116 261 77% 13
3 KALIA, VC , (2013) QUORUM SENSING INHIBITORS: AN OVERVIEW.BIOTECHNOLOGY ADVANCES. VOL. 31. ISSUE 2. P. 224-245 255 76% 148
4 GALLOWAY, WRJD , HODGKINSON, JT , BOWDEN, SD , WELCH, M , SPRING, DR , (2011) QUORUM SENSING IN GRAM-NEGATIVE BACTERIA: SMALL-MOLECULE MODULATION OF AHL AND AL-2 QUORUM SENSING PATHWAYS.CHEMICAL REVIEWS. VOL. 111. ISSUE 1. P. 28 -67 220 90% 171
5 LASARRE, B , FEDERLE, MJ , (2013) EXPLOITING QUORUM SENSING TO CONFUSE BACTERIAL PATHOGENS.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 77. ISSUE 1. P. 73 -111 252 71% 111
6 BERRY, JL , PELICIC, V , (2015) EXCEPTIONALLY WIDESPREAD NANOMACHINES COMPOSED OF TYPE IV PILINS: THE PROKARYOTIC SWISS ARMY KNIVES.FEMS MICROBIOLOGY REVIEWS. VOL. 39. ISSUE 1. P. 134 -154 179 74% 25
7 WHITEHEAD, NA , BARNARD, AML , SLATER, H , SIMPSON, NJL , SALMOND, GPC , (2001) QUORUM-SENSING IN GRAM-NEGATIVE BACTERIA.FEMS MICROBIOLOGY REVIEWS. VOL. 25. ISSUE 4. P. 365 -404 204 63% 760
8 DICKSCHAT, JS , (2010) QUORUM SENSING AND BACTERIAL BIOFILMS.NATURAL PRODUCT REPORTS. VOL. 27. ISSUE 3. P. 343 -369 201 67% 114
9 FREDERIX, M , DOWNIE, AJ , (2011) QUORUM SENSING: REGULATING THE REGULATORS.ADVANCES IN MICROBIAL PHYSIOLOGY, VOL 58. VOL. 58. ISSUE . P. 23-80 231 68% 17
10 NIVASKUMAR, M , FRANCETIC, O , (2014) TYPE II SECRETION SYSTEM: A MAGIC BEANSTALK OR A PROTEIN ESCALATOR.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1843. ISSUE 8. P. 1568 -1577 146 82% 34

Classes with closest relation at Level 2


Rank Class id link
1 1571 BIOFILM//N HALAMINE//BACTERIAL ADHESION
2 2006 BACTERIAL CHEMOTAXIS//MYXOCOCCUS XANTHUS//BACTERIAL FLAGELLUM
3 3445 HYDANTOIN//PYOCYANIN//THIOHYDANTOIN
4 1260 RALSTONIA SOLANACEARUM//BACTERIAL WILT//FIRE BLIGHT
5 1827 O ANTIGEN//BACTERIAL POLYSACCHARIDE STRUCTURE//S LAYER
6 1046 INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY//POLYPHASIC TAXONOMY//YUNNAN MICROBIOL
7 3863 FOOTROT//DICHELOBACTER NODOSUS//MORAXELLA BOVIS
8 2857 BURKHOLDERIA PSEUDOMALLEI//MELIOIDOSIS//BURKHOLDERIA MALLEI
9 542 CYSTIC FIBROSIS//CFTR//JOURNAL OF CYSTIC FIBROSIS
10 1261 VIBRIO CHOLERAE//VIBRIO VULNIFICUS//VIBRIO PARAHAEMOLYTICUS

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