Class information for:
Level 1: OOMYCETES//RXLR EFFECTOR//EFFECTOR

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
9 4 PLANT SCIENCES//FOOD SCIENCE & TECHNOLOGY//AGRONOMY 1475572
93 3       MYCOLOGY//MYCOTAXON//PLANT DISEASE 79323
546 2             FUNGICIDE RESISTANCE//LATE BLIGHT//PHYTOPHTHORA INFESTANS 15193
13241 1                   OOMYCETES//RXLR EFFECTOR//EFFECTOR 881

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 OOMYCETES authKW 593545 13% 15% 114
2 RXLR EFFECTOR authKW 447150 2% 83% 15
3 EFFECTOR authKW 335837 9% 12% 76
4 ABERDEEN OOMYCETE GRP address 325202 1% 91% 10
5 CRINKLERS authKW 214635 1% 100% 6
6 ABERDEEN OOMYCETE address 184493 2% 37% 14
7 PHYTOPHTHORA SOJAE authKW 161703 3% 20% 23
8 PHYTOPHTHORA authKW 143022 4% 11% 38
9 PHYTOPATHOL address 139037 9% 5% 79
10 PLANT PATHOL PROGRAMME address 138729 2% 24% 16

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Plant Sciences 13636 54% 0% 478
2 Mycology 3834 9% 0% 75
3 Genetics & Heredity 1797 20% 0% 173
4 Biotechnology & Applied Microbiology 1652 19% 0% 170
5 Microbiology 1221 17% 0% 146
6 Biochemistry & Molecular Biology 967 30% 0% 264
7 Parasitiology 228 3% 0% 30
8 Cell Biology 132 8% 0% 73
9 Virology 119 3% 0% 29
10 Evolutionary Biology 40 2% 0% 16

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 ABERDEEN OOMYCETE GRP 325202 1% 91% 10
2 ABERDEEN OOMYCETE 184493 2% 37% 14
3 PHYTOPATHOL 139037 9% 5% 79
4 PLANT PATHOL PROGRAMME 138729 2% 24% 16
5 ENES UNIDAD LEON 107317 0% 100% 3
6 SAINSBURY SLCU 107317 0% 100% 3
7 PLANT PATHOGEN INTERACT PROGRAMME 99353 1% 28% 10
8 HGEBIET PHYTOPATHOL 85847 1% 40% 6
9 VIRGINIA BIOINFORMAT 71612 4% 5% 39
10 GENET PROGRAMMES 71545 0% 100% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MOLECULAR PLANT PATHOLOGY 77532 6% 4% 52
2 MOLECULAR PLANT-MICROBE INTERACTIONS 69399 9% 2% 82
3 FUNGAL GENETICS AND BIOLOGY 19144 4% 2% 33
4 FRONTIERS IN PLANT SCIENCE 10162 5% 1% 42
5 CURRENT OPINION IN PLANT BIOLOGY 7004 2% 1% 19
6 BMC GENOMICS 6486 5% 0% 43
7 FUNGAL BIOLOGY 4375 1% 1% 10
8 PLANT CELL 4252 3% 0% 27
9 PLOS PATHOGENS 4041 3% 0% 26
10 EUKARYOTIC CELL 3808 2% 1% 16

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 OOMYCETES 593545 13% 15% 114 Search OOMYCETES Search OOMYCETES
2 RXLR EFFECTOR 447150 2% 83% 15 Search RXLR+EFFECTOR Search RXLR+EFFECTOR
3 EFFECTOR 335837 9% 12% 76 Search EFFECTOR Search EFFECTOR
4 CRINKLERS 214635 1% 100% 6 Search CRINKLERS Search CRINKLERS
5 PHYTOPHTHORA SOJAE 161703 3% 20% 23 Search PHYTOPHTHORA+SOJAE Search PHYTOPHTHORA+SOJAE
6 PHYTOPHTHORA 143022 4% 11% 38 Search PHYTOPHTHORA Search PHYTOPHTHORA
7 RXLR 107317 0% 100% 3 Search RXLR Search RXLR
8 AVIRULENCE 79495 2% 13% 17 Search AVIRULENCE Search AVIRULENCE
9 HEMIBIOTROPH 76303 1% 27% 8 Search HEMIBIOTROPH Search HEMIBIOTROPH
10 OOMYCETE EFFECTORS 71545 0% 100% 2 Search OOMYCETE+EFFECTORS Search OOMYCETE+EFFECTORS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 4029 NBS LRR//CLADOSPORIUM FULVUM//RESISTANCE GENE ANALOGS
2 6300 LATE BLIGHT//PHYTOPHTHORA INFESTANS//POTATO LATE BLIGHT
3 8771 APPRESSORIUM//FUNGAL GENET OURCES//MAGNAPORTHE ORYZAE
4 12031 FLS2//FLG22//RECEPTOR LIKE KINASE
5 15902 USTILAGO MAYDIS//ORGANISM INTERACT//CORN SMUT
6 14335 CHYTRID//ZOOSPORES//CHYTRIDIALES
7 19205 BROWN STEM ROT//PHYTOPHTHORA SOJAE//PHIALOPHORA GREGATA
8 19376 PHYTOPHTHORA CAPSICI//PHYTOPHTHORA BLIGHT//MANDIPROPAMID
9 12725 UREDINALES//RUST FUNGI//PUCCINIALES
10 5295 ELICITOR//ELICITIN//CRYPTOGEIN

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