Class information for:
Level 1: KINASE SPECIFIC//PTM CODE//CELLULAR MOL LOG TEAM

Basic class information

Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.



Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
133 3       BIOCHEMICAL RESEARCH METHODS//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//PROTEOMICS 67621
2508 2             PHOSPHOPROTEOMICS//PHOSPHOPEPTIDES//INTRINSICALLY DISORDERED PROTEINS 4108
19400 1                   KINASE SPECIFIC//PTM CODE//CELLULAR MOL LOG TEAM 531

Terms with highest relevance score



rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 KINASE SPECIFIC authKW 178058 1% 100% 3
2 PTM CODE authKW 178058 1% 100% 3
3 CELLULAR MOL LOG TEAM address 134887 1% 45% 5
4 PHOSPHORYLATION NETWORK authKW 133542 1% 75% 3
5 PAMCHIP authKW 118705 0% 100% 2
6 PHOSPHORYLATION PREDICTION authKW 118705 0% 100% 2
7 POST TRANSLATIONAL MODIFICATIONS OF PROTEINS PTMS authKW 118705 0% 100% 2
8 SOL H SNYDER NEUROSCI address 118705 0% 100% 2
9 SOLVENT ACCESSIBLE SURFACE AREA ASA authKW 118705 0% 100% 2
10 SUBSTRATE MOTIF authKW 118705 0% 100% 2

Web of Science journal categories



chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 10461 26% 0% 138
2 Biochemical Research Methods 6119 36% 0% 190
3 Biotechnology & Applied Microbiology 1506 23% 0% 124
4 Biochemistry & Molecular Biology 1489 45% 0% 237
5 Cell Biology 304 14% 0% 74
6 Genetics & Heredity 125 8% 0% 41
7 Biology 71 4% 0% 21
8 Biophysics 65 5% 0% 27
9 Computer Science, Interdisciplinary Applications 28 3% 0% 14
10 Mathematics, Interdisciplinary Applications 15 2% 0% 9

Address terms



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CELLULAR MOL LOG TEAM 134887 1% 45% 5
2 SOL H SNYDER NEUROSCI 118705 0% 100% 2
3 TAO YUAN HOSP 79135 0% 67% 2
4 MOL BIOINFORMAT 63123 2% 11% 10
5 ADV CHEM PHYS BIOL PHARMACEUT SCI 59353 0% 100% 1
6 BIOPHYSEPIGEN TRANSLAT PROGRAM 59353 0% 100% 1
7 CHROMATOG RANDA 59353 0% 100% 1
8 COMP INTELLIGENCE LEARNING DISCOVERY 59353 0% 100% 1
9 CYBERNET INTELLIGENCE 59353 0% 100% 1
10 EPIGENET CHROMATIN DYNAMEPIGEN TRANSLAT PR 59353 0% 100% 1

Journals



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BIOINFORMATICS 13180 9% 0% 50
2 BMC BIOINFORMATICS 9238 7% 0% 35
3 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 5357 2% 1% 8
4 SCIENCE SIGNALING 5315 2% 1% 12
5 MOLECULAR & CELLULAR PROTEOMICS 4712 3% 0% 16
6 BRIEFINGS IN BIOINFORMATICS 2814 1% 1% 6
7 MOLECULAR BIOSYSTEMS 2505 2% 0% 11
8 PLOS COMPUTATIONAL BIOLOGY 1982 2% 0% 13
9 PROTEOMICS 1969 3% 0% 14
10 MOLECULAR SYSTEMS BIOLOGY 1866 1% 1% 5

Author Key Words



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 KINASE SPECIFIC 178058 1% 100% 3 Search KINASE+SPECIFIC Search KINASE+SPECIFIC
2 PTM CODE 178058 1% 100% 3 Search PTM+CODE Search PTM+CODE
3 PHOSPHORYLATION NETWORK 133542 1% 75% 3 Search PHOSPHORYLATION+NETWORK Search PHOSPHORYLATION+NETWORK
4 PAMCHIP 118705 0% 100% 2 Search PAMCHIP Search PAMCHIP
5 PHOSPHORYLATION PREDICTION 118705 0% 100% 2 Search PHOSPHORYLATION+PREDICTION Search PHOSPHORYLATION+PREDICTION
6 POST TRANSLATIONAL MODIFICATIONS OF PROTEINS PTMS 118705 0% 100% 2 Search POST+TRANSLATIONAL+MODIFICATIONS+OF+PROTEINS+PTMS Search POST+TRANSLATIONAL+MODIFICATIONS+OF+PROTEINS+PTMS
7 SOLVENT ACCESSIBLE SURFACE AREA ASA 118705 0% 100% 2 Search SOLVENT+ACCESSIBLE+SURFACE+AREA+ASA Search SOLVENT+ACCESSIBLE+SURFACE+AREA+ASA
8 SUBSTRATE MOTIF 118705 0% 100% 2 Search SUBSTRATE+MOTIF Search SUBSTRATE+MOTIF
9 PHOSPHORYLATION SITE PREDICTION 106832 1% 60% 3 Search PHOSPHORYLATION+SITE+PREDICTION Search PHOSPHORYLATION+SITE+PREDICTION
10 SWISS PROT DATABASE 106832 1% 60% 3 Search SWISS+PROT+DATABASE Search SWISS+PROT+DATABASE

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1



rank cluster_id2 link
1 4528 PHOSPHOPROTEOMICS//PHOSPHOPEPTIDES//PHOSPHOPEPTIDE ENRICHMENT
2 18400 LYSINE ACETYLATION//ACETYLOME//LYSINE SUCCINYLATION
3 21819 FUTURE CHEM//D RECS//SYST LIFE SCI
4 30936 PUPYLATION//PROKARYOTIC UBIQUITIN LIKE PROTEIN//PAFA
5 7815 INTRINSICALLY DISORDERED PROTEINS//BIOL RUMENTAT//INTRINSIC DISORDER
6 2565 PSEUDO AMINO ACID COMPOSITION//PROTEIN STRUCTURAL CLASS//JACKKNIFE TEST
7 17211 CSK//CHK//CSK HOMOLOGOUS KINASE
8 26059 TYROSYLPROTEIN SULFOTRANSFERASE//TYROSINE SULFATION//TPST
9 15351 PKNB//BY KINASE//BACTERIAL PROTEIN PHOSPHORYLATION
10 10582 NSSNPS//POLYPHEN//LSDB

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