Class information for:
Level 1: NSSNPS//POLYPHEN//LSDB

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
133 3       BIOCHEMICAL RESEARCH METHODS//JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY//PROTEOMICS 67621
756 2             MATHEMATICAL & COMPUTATIONAL BIOLOGY//BMC BIOINFORMATICS//BIOINFORMATICS 12852
10582 1                   NSSNPS//POLYPHEN//LSDB 1081

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 NSSNPS authKW 596078 3% 66% 31
2 POLYPHEN authKW 246339 1% 65% 13
3 LSDB authKW 211621 1% 52% 14
4 PATHOGENICITY PREDICTION authKW 176370 1% 55% 11
5 HUMAN MUTATION journal 160920 14% 4% 150
6 SNYDER ROBINSON SYNDROME authKW 131188 1% 75% 6
7 MUTATION DATABASE authKW 125727 2% 25% 17
8 BRISTOL SYST BIOMED address 116615 0% 100% 4
9 POLYPHEN 2 authKW 104117 0% 71% 5
10 DBNSFP authKW 87461 0% 100% 3

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 13941 21% 0% 228
2 Genetics & Heredity 8272 37% 0% 395
3 Biochemical Research Methods 3594 20% 0% 213
4 Biotechnology & Applied Microbiology 3240 24% 0% 259
5 Biochemistry & Molecular Biology 1742 35% 0% 380
6 Biophysics 273 7% 0% 73
7 Medical Informatics 53 1% 0% 11
8 Computer Science, Interdisciplinary Applications 40 2% 0% 25
9 Cell Biology 17 4% 0% 46
10 Biology 4 1% 0% 14

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BRISTOL SYST BIOMED 116615 0% 100% 4
2 NETWORK BIOMED RARE DIS CIBERER 87461 0% 100% 3
3 BIOTECHNOL CHEM BIOMED ENGN 75163 1% 18% 14
4 BIOINFO GRP 3BIO 58307 0% 100% 2
5 GENOM DISORDERS 52898 1% 26% 7
6 HUMAN VARIOME PROJECT 52474 0% 60% 3
7 CELL BIOL GENETMGC 38870 0% 67% 2
8 PL INFORMAT MANAGEMENT ECON 38870 0% 67% 2
9 ADV CAMPUS ITABIRA 29154 0% 100% 1
10 AFFILIATED HOSP 1BEIJING GENOME CAS 29154 0% 100% 1

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 HUMAN MUTATION 160920 14% 4% 150
2 BIOINFORMATICS 22868 9% 1% 94
3 INTERDISCIPLINARY SCIENCES-COMPUTATIONAL LIFE SCIENCES 16299 1% 4% 14
4 BMC BIOINFORMATICS 9988 5% 1% 52
5 NUCLEIC ACIDS RESEARCH 6953 9% 0% 99
6 BMC GENOMICS 3478 3% 0% 35
7 HUMAN GENOMICS 3165 0% 3% 4
8 ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY 3040 0% 2% 5
9 GENOME MEDICINE 2627 1% 1% 8
10 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 2623 1% 1% 8

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 NSSNPS 596078 3% 66% 31 Search NSSNPS Search NSSNPS
2 POLYPHEN 246339 1% 65% 13 Search POLYPHEN Search POLYPHEN
3 LSDB 211621 1% 52% 14 Search LSDB Search LSDB
4 PATHOGENICITY PREDICTION 176370 1% 55% 11 Search PATHOGENICITY+PREDICTION Search PATHOGENICITY+PREDICTION
5 SNYDER ROBINSON SYNDROME 131188 1% 75% 6 Search SNYDER+ROBINSON+SYNDROME Search SNYDER+ROBINSON+SYNDROME
6 MUTATION DATABASE 125727 2% 25% 17 Search MUTATION+DATABASE Search MUTATION+DATABASE
7 POLYPHEN 2 104117 0% 71% 5 Search POLYPHEN+2 Search POLYPHEN+2
8 DBNSFP 87461 0% 100% 3 Search DBNSFP Search DBNSFP
9 FATHMM 87461 0% 100% 3 Search FATHMM Search FATHMM
10 SNPSGO 87461 0% 100% 3 Search SNPSGO Search SNPSGO

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 13044 CANCER GENOME//DRIVER GENE//PRECIS HLTH
2 2086 VARIANT CALLING//NEXT GENERATION SEQUENCING//BIOINFORMATICS
3 17901 DISEASE GENE PREDICTION//HUMAN DISEASE NETWORK//GENE PRIORITIZATION
4 11137 INCIDENTAL FINDINGS//RETURN OF RESULTS//SECONDARY FINDINGS
5 18374 STAPHYLOCOCCAL NUCLEASE//THERMODYNAMIC MOLECULAR SWITCH//INNATE TEMPERATURE INVARIANT ENTHALPY
6 4203 JOURNAL OF BIOMEDICAL SEMANTICS//DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION//ZFIN
7 20321 CONSERVED NON CODING ELEMENTS//ENERGY ENVIRONM BIOL COMP//SARS MARINE MOL BIOL
8 19400 KINASE SPECIFIC//PTM CODE//CELLULAR MOL LOG TEAM
9 6486 CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING
10 8231 PROTEIN FUNCTION PREDICTION//3D ZERNIKE DESCRIPTOR//COMPLEX SCI SOFTWARE

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