Class information for:
Level 1: CANCER GENOME//DRIVER GENE//PRECIS HLTH

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
196 3       LUNG CANCER//NON SMALL CELL LUNG CANCER//THORAC SURG 53631
2113 2             CRIZOTINIB//ALK//ANAPLASTIC LYMPHOMA KINASE 5482
13044 1                   CANCER GENOME//DRIVER GENE//PRECIS HLTH 895

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CANCER GENOME authKW 201749 2% 30% 19
2 DRIVER GENE authKW 158449 1% 50% 9
3 PRECIS HLTH address 118832 1% 38% 9
4 DRIVER PATHWAY authKW 105638 0% 100% 3
5 UNIT BIOMED INFORMAT address 102411 2% 18% 16
6 PAN CANCER authKW 98341 1% 31% 9
7 CANCER DRIVERS authKW 90540 1% 43% 6
8 CANCER GENOMICS authKW 77580 2% 12% 18
9 CAUSAL DISCOVERY address 70426 0% 100% 2
10 DIFFERENTIALLY METHYLATED CPG SITES authKW 70426 0% 100% 2

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 9106 19% 0% 168
2 Genetics & Heredity 4579 30% 0% 270
3 Biotechnology & Applied Microbiology 2779 24% 0% 218
4 Oncology 2326 28% 0% 247
5 Biochemical Research Methods 2263 17% 0% 155
6 Cell Biology 674 16% 0% 140
7 Biochemistry & Molecular Biology 570 24% 0% 216
8 Multidisciplinary Sciences 315 3% 0% 31
9 Biology 18 2% 0% 18
10 Computer Science, Interdisciplinary Applications 18 2% 0% 17

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PRECIS HLTH 118832 1% 38% 9
2 UNIT BIOMED INFORMAT 102411 2% 18% 16
3 CAUSAL DISCOVERY 70426 0% 100% 2
4 GENOME SEQUENCING ANAL 70418 1% 33% 6
5 CANC GENOME PROJECT 59090 2% 9% 19
6 MCCORMICK GENOM PROTE 40883 1% 19% 6
7 ONTARIO TUMOUR BANK 39611 0% 38% 3
8 ADV BIOMED COMP INFORMAT SYST PROGRAM 35213 0% 100% 1
9 ADV TECHNOL STRATEG PARTNERSHIPS 35213 0% 100% 1
10 AHMED BIN ZAYED NAHYAN PANCREAT CANC 35213 0% 100% 1

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 GENOME MEDICINE 17968 2% 3% 19
2 BIOINFORMATICS 9771 6% 1% 56
3 DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION 7148 1% 2% 12
4 GENOME BIOLOGY 6516 3% 1% 24
5 BMC MEDICAL GENOMICS 3735 1% 1% 9
6 PLOS COMPUTATIONAL BIOLOGY 3368 2% 0% 22
7 GENOMICS PROTEOMICS & BIOINFORMATICS 3132 0% 3% 3
8 BMC SYSTEMS BIOLOGY 3027 1% 1% 12
9 BMC BIOINFORMATICS 2995 3% 0% 26
10 NATURE GENETICS 2744 2% 0% 20

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 CANCER GENOME 201749 2% 30% 19 Search CANCER+GENOME Search CANCER+GENOME
2 DRIVER GENE 158449 1% 50% 9 Search DRIVER+GENE Search DRIVER+GENE
3 DRIVER PATHWAY 105638 0% 100% 3 Search DRIVER+PATHWAY Search DRIVER+PATHWAY
4 PAN CANCER 98341 1% 31% 9 Search PAN+CANCER Search PAN+CANCER
5 CANCER DRIVERS 90540 1% 43% 6 Search CANCER+DRIVERS Search CANCER+DRIVERS
6 CANCER GENOMICS 77580 2% 12% 18 Search CANCER+GENOMICS Search CANCER+GENOMICS
7 DIFFERENTIALLY METHYLATED CPG SITES 70426 0% 100% 2 Search DIFFERENTIALLY+METHYLATED+CPG+SITES Search DIFFERENTIALLY+METHYLATED+CPG+SITES
8 DRIVER PATHWAYS 70426 0% 100% 2 Search DRIVER+PATHWAYS Search DRIVER+PATHWAYS
9 MUTATION CLUSTERING 70426 0% 100% 2 Search MUTATION+CLUSTERING Search MUTATION+CLUSTERING
10 RELATIVE METHYLATION LEVEL ORDERINGS 70426 0% 100% 2 Search RELATIVE+METHYLATION+LEVEL+ORDERINGS Search RELATIVE+METHYLATION+LEVEL+ORDERINGS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 11049 EVOLUT CANC//INTRATUMOR HETEROGENEITY//CANCER EVOLUTION
2 21842 RESEARCH BIOPSY//PRECISION ONCOLOGY//PERSONALIZED CANC THER Y
3 10582 NSSNPS//POLYPHEN//LSDB
4 22325 NCI 60//ADV BIOINFORMAT SYST MED//CLUSTERED IMAGE MAP
5 2086 VARIANT CALLING//NEXT GENERATION SEQUENCING//BIOINFORMATICS
6 9272 GENE SET ANALYSIS//BMC BIOINFORMATICS//BIOINFORMATICS
7 26425 BAP1//SETD2//PBRM1
8 17901 DISEASE GENE PREDICTION//HUMAN DISEASE NETWORK//GENE PRIORITIZATION
9 30131 PERITONEAL TUMOR SPREAD//AUTOMATED CLASS DISCOVERY//CELL LINE MODEL FOR SUBTYPE
10 34166 CIRCOS//GENOMIC DATA VISUALIZATION//BHF GLASGOW CARIOVASC

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