Class information for:
Level 1: CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
6 4 CHEMISTRY, ORGANIC//CHEMISTRY, INORGANIC & NUCLEAR//CHEMISTRY, MULTIDISCIPLINARY 1698077
156 3       PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN FOLDING//PROTEIN STRUCTURE PREDICTION 63028
318 2             PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//JOURNAL OF CHEMICAL INFORMATION AND MODELING 18575
6486 1                   CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING 1507

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CAPRI authKW 1070665 4% 80% 64
2 PROTEIN PROTEIN DOCKING authKW 1017573 7% 47% 103
3 PROTEIN DOCKING authKW 700799 5% 46% 73
4 PROTEIN PROTEIN INTERFACE authKW 493685 3% 54% 44
5 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS journal 346915 22% 5% 329
6 PROTEIN INTERFACE authKW 274764 2% 45% 29
7 SHAPE COMPLEMENTARITY authKW 249229 1% 57% 21
8 PROTEIN PROTEIN INTERACTION authKW 224731 18% 4% 269
9 INTERFACE PREDICTION authKW 214127 1% 64% 16
10 SACKLER MOL MED address 171681 4% 15% 54

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biophysics 13155 34% 0% 509
2 Mathematical & Computational Biology 12311 17% 0% 254
3 Biochemistry & Molecular Biology 9908 65% 0% 986
4 Biochemical Research Methods 5048 20% 0% 298
5 Biotechnology & Applied Microbiology 1169 13% 0% 196
6 Computer Science, Interdisciplinary Applications 535 6% 0% 86
7 Cell Biology 101 6% 0% 95
8 Chemistry, Medicinal 59 3% 0% 40
9 Computer Science, Information Systems 40 2% 0% 30
10 Chemistry, Multidisciplinary 23 6% 0% 89

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 SACKLER MOL MED 171681 4% 15% 54
2 BIOMOL MODELLING 118916 2% 25% 23
3 HUMAN GENET MOL MED 101227 3% 10% 50
4 JOINT BSC IRB PROGRAMME COMPUTAT BIOL 70566 1% 38% 9
5 BC6 62736 0% 100% 3
6 CP 263 62736 0% 100% 3
7 JOINT BSC IRB PROGRAM COMPUTAT BIOL 56213 1% 24% 11
8 IBBMC UMR 8619 55762 0% 67% 4
9 EXPT COMPUTAT BIOL 55300 2% 9% 30
10 PHYS T38 55164 1% 16% 16

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 346915 22% 5% 329
2 BIOINFORMATICS 15658 6% 1% 92
3 BMC BIOINFORMATICS 14909 5% 1% 75
4 PROTEIN SCIENCE 12099 4% 1% 61
5 CURRENT OPINION IN STRUCTURAL BIOLOGY 10897 2% 1% 35
6 BMC STRUCTURAL BIOLOGY 8041 1% 3% 14
7 JOURNAL OF MOLECULAR BIOLOGY 6197 6% 0% 84
8 JOURNAL OF CHEMICAL INFORMATION AND MODELING 3978 2% 1% 25
9 STRUCTURE 3038 2% 1% 24
10 PLOS COMPUTATIONAL BIOLOGY 2998 2% 1% 27

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 CAPRI 1070665 4% 80% 64 Search CAPRI Search CAPRI
2 PROTEIN PROTEIN DOCKING 1017573 7% 47% 103 Search PROTEIN+PROTEIN+DOCKING Search PROTEIN+PROTEIN+DOCKING
3 PROTEIN DOCKING 700799 5% 46% 73 Search PROTEIN+DOCKING Search PROTEIN+DOCKING
4 PROTEIN PROTEIN INTERFACE 493685 3% 54% 44 Search PROTEIN+PROTEIN+INTERFACE Search PROTEIN+PROTEIN+INTERFACE
5 PROTEIN INTERFACE 274764 2% 45% 29 Search PROTEIN+INTERFACE Search PROTEIN+INTERFACE
6 SHAPE COMPLEMENTARITY 249229 1% 57% 21 Search SHAPE+COMPLEMENTARITY Search SHAPE+COMPLEMENTARITY
7 PROTEIN PROTEIN INTERACTION 224731 18% 4% 269 Search PROTEIN+PROTEIN+INTERACTION Search PROTEIN+PROTEIN+INTERACTION
8 INTERFACE PREDICTION 214127 1% 64% 16 Search INTERFACE+PREDICTION Search INTERFACE+PREDICTION
9 ZDOCK 167287 1% 67% 12 Search ZDOCK Search ZDOCK
10 DOCKING MINIMIZATION 148705 1% 89% 8 Search DOCKING+MINIMIZATION Search DOCKING+MINIMIZATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 8231 PROTEIN FUNCTION PREDICTION//3D ZERNIKE DESCRIPTOR//COMPLEX SCI SOFTWARE
2 33482 LINEAR BINDING MOTIFS//ROSETTA FLEXPEPDOCK//COMPUTATIONAL PEPTIDOLOGY
3 17375 INTERACTION PROPENSITY//DNA BINDING RESIDUES//RNA BINDING RESIDUES
4 36602 DEHYDRON//ARGENTINE MATH IAM//BASILEA
5 13540 COMPUTATIONAL PROTEIN DESIGN//PROTEIN DESIGN//DEAD END ELIMINATION
6 22604 ELECTROSTATIC RATE ENHANCEMENT//ELECTROSTATIC STEERING//WEIGHTED ENSEMBLE BROWNIAN DYNAMICS
7 594 PROTEIN INTERACTION NETWORK//PROTEIN PROTEIN INTERACTION NETWORK//ESSENTIAL PROTEINS
8 14250 STAPLED PEPTIDES//ALPHA HELIX MIMETICS//PROTEOMIMETICS
9 600 PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP
10 1311 JOURNAL OF CHEMICAL INFORMATION AND MODELING//VIRTUAL SCREENING//JOURNAL OF COMPUTER-AIDED MOLECULAR DESIGN

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