Class information for:
Level 1: INTERACTION PROPENSITY//DNA BINDING RESIDUES//RNA BINDING RESIDUES

Basic class information

Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes

The table includes all classes above and classes immediately below the current class.



Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
55 3       CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY//CHROMATIN 94586
314 2             PRE MRNA SPLICING//RNA BINDING PROTEIN//SPLICEOSOME 18650
17375 1                   INTERACTION PROPENSITY//DNA BINDING RESIDUES//RNA BINDING RESIDUES 631

Terms with highest relevance score



rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 INTERACTION PROPENSITY authKW 299677 1% 100% 6
2 DNA BINDING RESIDUES authKW 199785 1% 100% 4
3 RNA BINDING RESIDUES authKW 149838 0% 100% 3
4 PROTEIN RNA INTERACTIONS authKW 128402 3% 14% 18
5 COMPUTAT INTELLIGENCE INFORMAT PROC address 99892 0% 100% 2
6 CROSS LINKING AND IMMUNOPRECIPITATION authKW 99892 0% 100% 2
7 DIRECT AND INDIRECT READOUTS authKW 99892 0% 100% 2
8 DNA PROTEIN RECOGNITION MODULE authKW 99892 0% 100% 2
9 INTERACTOME CAPTURE authKW 99892 0% 100% 2
10 INTERFACE CLASS authKW 99892 0% 100% 2

Web of Science journal categories



chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 6481 19% 0% 119
2 Biochemistry & Molecular Biology 2903 56% 0% 351
3 Biochemical Research Methods 2899 23% 0% 145
4 Biotechnology & Applied Microbiology 1434 21% 0% 133
5 Biophysics 507 11% 0% 70
6 Genetics & Heredity 248 10% 0% 60
7 Cell Biology 229 12% 0% 73
8 Computer Science, Interdisciplinary Applications 171 5% 0% 32
9 Biology 84 4% 0% 25
10 Statistics & Probability 5 1% 0% 8

Address terms



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 COMPUTAT INTELLIGENCE INFORMAT PROC 99892 0% 100% 2
2 OFF INFORMATIZAT MANAGEMENT PLANNING 99892 0% 100% 2
3 GOLDEN AUDIT 99888 1% 50% 4
4 SHENZHEN ENGN PERFORMANCE ROBOTS DIGITAL STAG 74916 0% 50% 3
5 HLTH INFORMAT TRANSLAT SCI HITS 5021 66594 0% 67% 2
6 COMPUTAT INTELLIGENCE LEARNING DISCOVERY 56186 0% 38% 3
7 BIOCHEM MOL PHARMACOL MED 49946 0% 100% 1
8 BIOHEALTH INFORMAT 49946 0% 100% 1
9 BIOL 68 580 49946 0% 100% 1
10 COLUMBIA UNIV COMPUTAT BIOL BIOINFORMAT C2B 49946 0% 100% 1

Journals



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 NUCLEIC ACIDS RESEARCH 14902 17% 0% 110
2 BIOINFORMATICS 7432 6% 0% 41
3 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 6842 5% 0% 30
4 BMC BIOINFORMATICS 6483 5% 0% 32
5 METHODS 5110 3% 1% 18
6 WILEY INTERDISCIPLINARY REVIEWS-RNA 4483 1% 2% 6
7 GENOME BIOLOGY 4106 3% 1% 16
8 BRIEFINGS IN FUNCTIONAL GENOMICS 3684 1% 1% 5
9 PROTEOME SCIENCE 3126 1% 1% 6
10 COMPUTATIONAL BIOLOGY AND CHEMISTRY 2546 1% 1% 7

Author Key Words



chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 INTERACTION PROPENSITY 299677 1% 100% 6 Search INTERACTION+PROPENSITY Search INTERACTION+PROPENSITY
2 DNA BINDING RESIDUES 199785 1% 100% 4 Search DNA+BINDING+RESIDUES Search DNA+BINDING+RESIDUES
3 RNA BINDING RESIDUES 149838 0% 100% 3 Search RNA+BINDING+RESIDUES Search RNA+BINDING+RESIDUES
4 PROTEIN RNA INTERACTIONS 128402 3% 14% 18 Search PROTEIN+RNA+INTERACTIONS Search PROTEIN+RNA+INTERACTIONS
5 CROSS LINKING AND IMMUNOPRECIPITATION 99892 0% 100% 2 Search CROSS+LINKING+AND+IMMUNOPRECIPITATION Search CROSS+LINKING+AND+IMMUNOPRECIPITATION
6 DIRECT AND INDIRECT READOUTS 99892 0% 100% 2 Search DIRECT+AND+INDIRECT+READOUTS Search DIRECT+AND+INDIRECT+READOUTS
7 DNA PROTEIN RECOGNITION MODULE 99892 0% 100% 2 Search DNA+PROTEIN+RECOGNITION+MODULE Search DNA+PROTEIN+RECOGNITION+MODULE
8 INTERACTOME CAPTURE 99892 0% 100% 2 Search INTERACTOME+CAPTURE Search INTERACTOME+CAPTURE
9 INTERFACE CLASS 99892 0% 100% 2 Search INTERFACE+CLASS Search INTERFACE+CLASS
10 MESSENGER RIBONUCLEOPROTEIN COMPLEXES 99892 0% 100% 2 Search MESSENGER+RIBONUCLEOPROTEIN+COMPLEXES Search MESSENGER+RIBONUCLEOPROTEIN+COMPLEXES

Core articles

The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1



rank cluster_id2 link
1 27586 PUMILIO//PUF PROTEINS//PUF DOMAIN
2 6486 CAPRI//PROTEIN PROTEIN DOCKING//PROTEIN DOCKING
3 2027 MOTIF DISCOVERY//TRANSCRIPTION FACTOR BINDING SITE//MOTIF FINDING
4 2565 PSEUDO AMINO ACID COMPOSITION//PROTEIN STRUCTURAL CLASS//JACKKNIFE TEST
5 8231 PROTEIN FUNCTION PREDICTION//3D ZERNIKE DESCRIPTOR//COMPLEX SCI SOFTWARE
6 14537 HNRNP B1//HNRNP A2 B1//U1A
7 3371 HUR//AU RICH ELEMENT//TRISTETRAPROLIN
8 996 SR PROTEINS//ALTERNATIVE SPLICING//SRPK1
9 36071 RBM5//RBM10//LUCA 15
10 3294 RNA SECONDARY STRUCTURE//RNA SECONDARY STRUCTURE PREDICTION//PSEUDOKNOT

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