Class information for:
Level 1: SR PROTEINS//ALTERNATIVE SPLICING//SRPK1

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
55 3       CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY//CHROMATIN 94586
314 2             PRE MRNA SPLICING//RNA BINDING PROTEIN//SPLICEOSOME 18650
996 1                   SR PROTEINS//ALTERNATIVE SPLICING//SRPK1 2947

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 SR PROTEINS authKW 947065 5% 59% 150
2 ALTERNATIVE SPLICING authKW 681606 19% 11% 557
3 SRPK1 authKW 212584 1% 76% 26
4 POLYPYRIMIDINE TRACT BINDING PROTEIN authKW 201484 1% 54% 35
5 SPLICING FACTOR authKW 174460 1% 40% 41
6 SPLICING ENHANCER authKW 157107 1% 64% 23
7 RS DOMAIN authKW 156812 1% 67% 22
8 PRE MRNA SPLICING authKW 127214 3% 16% 76
9 SPLICING REGULATION authKW 95024 1% 44% 20
10 SF2 ASF authKW 87312 0% 58% 14

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemistry & Molecular Biology 14015 56% 0% 1664
2 Cell Biology 9888 30% 0% 896
3 Genetics & Heredity 9206 24% 0% 705
4 Biotechnology & Applied Microbiology 1842 12% 0% 349
5 Mathematical & Computational Biology 1566 5% 0% 134
6 Developmental Biology 857 4% 0% 111
7 Biochemical Research Methods 592 6% 0% 166
8 Biophysics 339 5% 0% 146
9 Oncology 185 6% 0% 187
10 Plant Sciences 53 4% 0% 105

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 RNA RNP GRP 85542 0% 100% 8
2 PROGRAM MOL PLANT BIOL 64308 1% 32% 19
3 EQUIPE BASES MOL PROG S CANC POUMON 2 54989 0% 86% 6
4 GENOM PHYSIOL 54124 0% 56% 9
5 PROGRAM MOL CANC BIOL 32739 0% 44% 7
6 MICROBIOL INFECTIOL 27398 1% 10% 27
7 CORE MOL PHARMACOL 24057 0% 75% 3
8 HAVANA GRP 24057 0% 75% 3
9 HUGHES UNDER 24057 0% 75% 3
10 CLIN SCI BRISTOL RENAL 21385 0% 100% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 RNA 23743 3% 3% 82
2 NUCLEIC ACIDS RESEARCH 14810 8% 1% 239
3 RNA-A PUBLICATION OF THE RNA SOCIETY 13654 1% 4% 34
4 MOLECULAR AND CELLULAR BIOLOGY 9736 5% 1% 144
5 GENOME RESEARCH 8513 2% 2% 52
6 GENES & DEVELOPMENT 8292 3% 1% 77
7 GENOME BIOLOGY 6919 2% 1% 45
8 MOLECULAR CELL 6489 2% 1% 59
9 BMC GENOMICS 4636 2% 1% 67
10 RNA BIOLOGY 4299 1% 2% 20

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 SR PROTEINS 947065 5% 59% 150 Search SR+PROTEINS Search SR+PROTEINS
2 ALTERNATIVE SPLICING 681606 19% 11% 557 Search ALTERNATIVE+SPLICING Search ALTERNATIVE+SPLICING
3 SRPK1 212584 1% 76% 26 Search SRPK1 Search SRPK1
4 POLYPYRIMIDINE TRACT BINDING PROTEIN 201484 1% 54% 35 Search POLYPYRIMIDINE+TRACT+BINDING+PROTEIN Search POLYPYRIMIDINE+TRACT+BINDING+PROTEIN
5 SPLICING FACTOR 174460 1% 40% 41 Search SPLICING+FACTOR Search SPLICING+FACTOR
6 SPLICING ENHANCER 157107 1% 64% 23 Search SPLICING+ENHANCER Search SPLICING+ENHANCER
7 RS DOMAIN 156812 1% 67% 22 Search RS+DOMAIN Search RS+DOMAIN
8 PRE MRNA SPLICING 127214 3% 16% 76 Search PRE+MRNA+SPLICING Search PRE+MRNA+SPLICING
9 SPLICING REGULATION 95024 1% 44% 20 Search SPLICING+REGULATION Search SPLICING+REGULATION
10 SF2 ASF 87312 0% 58% 14 Search SF2+ASF Search SF2+ASF

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 2285 PRE MRNA SPLICING//SPLICEOSOME//SNRNP
2 32033 HERBOXIDIENE//FR901464//SPLICEOSTATIN A
3 14537 HNRNP B1//HNRNP A2 B1//U1A
4 36071 RBM5//RBM10//LUCA 15
5 10104 NMD//UPF1//NONSENSE MEDIATED MRNA DECAY
6 32353 P54NRB//POLYPYRIMIDINE TRACT BINDING PROTEIN ASSOCIATED SPLICING FACTOR//NONO
7 6435 RNA SEQ//TRANSCRIPTOME ASSEMBLY//DE NOVO ASSEMBLY
8 17375 INTERACTION PROPENSITY//DNA BINDING RESIDUES//RNA BINDING RESIDUES
9 18135 INTRON GAIN//INTRON LOSS//INTRON EVOLUTION
10 17779 EXON SKIPPING//MC LOCKWOOD MUSCULAR DYSTROPHY//NEUROMUSCULAR ALS

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