Class information for:
Level 1: PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
6 4 CHEMISTRY, ORGANIC//CHEMISTRY, INORGANIC & NUCLEAR//CHEMISTRY, MULTIDISCIPLINARY 1698077
156 3       PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN FOLDING//PROTEIN STRUCTURE PREDICTION 63028
318 2             PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS//PROTEIN STRUCTURE PREDICTION//JOURNAL OF CHEMICAL INFORMATION AND MODELING 18575
600 1                   PROTEIN STRUCTURE PREDICTION//FOLD RECOGNITION//CASP 3285

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROTEIN STRUCTURE PREDICTION authKW 2454188 14% 54% 474
2 FOLD RECOGNITION authKW 773430 4% 60% 135
3 CASP authKW 727237 3% 71% 107
4 THREADING authKW 709592 4% 58% 127
5 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS journal 681805 21% 10% 681
6 KNOWLEDGE BASED POTENTIALS authKW 351437 2% 62% 59
7 STATISTICAL POTENTIALS authKW 277733 2% 55% 53
8 STRUCTURE PREDICTION authKW 271937 4% 20% 145
9 PROTEIN THREADING authKW 257467 1% 73% 37
10 LOOP MODELING authKW 216395 1% 59% 38

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Mathematical & Computational Biology 28170 17% 1% 567
2 Biophysics 25168 32% 0% 1042
3 Biochemistry & Molecular Biology 16706 58% 0% 1912
4 Biochemical Research Methods 12727 21% 0% 696
5 Biotechnology & Applied Microbiology 3657 15% 0% 501
6 Computer Science, Interdisciplinary Applications 1811 7% 0% 228
7 Computer Science, Artificial Intelligence 149 2% 0% 79
8 Biology 134 3% 0% 83
9 Statistics & Probability 122 2% 0% 67
10 Computer Science, Theory & Methods 58 2% 0% 61

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 THEORY BIOPOLYMERS 89410 1% 55% 17
2 C BOND LIFE SCI 81732 0% 61% 14
3 PELS FAMILY BIOCHEM STRUCT BIOL 72298 0% 54% 14
4 CUBIC 60402 1% 30% 21
5 EBGM 52747 0% 50% 11
6 COMPUTAT PROTEOM BIOPHYS 51791 0% 60% 9
7 PL MOL ENGN 48190 0% 36% 14
8 BIOINFORMAT MOL DESIGN TECHNOL INNOVAT 47217 0% 62% 8
9 STUDY SYST BIOL 45454 1% 23% 21
10 EQUIPE BIOINFORMAT GENOM MOL 44943 0% 31% 15

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS 681805 21% 10% 681
2 PROTEIN ENGINEERING 55988 4% 5% 115
3 BIOINFORMATICS 51470 7% 2% 246
4 PROTEIN SCIENCE 37296 5% 2% 158
5 FOLDING & DESIGN 33828 1% 14% 25
6 BMC STRUCTURAL BIOLOGY 31666 1% 8% 41
7 BMC BIOINFORMATICS 23452 4% 2% 139
8 PROTEINS-STRUCTURE FUNCTION AND GENETICS 15699 1% 6% 27
9 JOURNAL OF COMPUTATIONAL BIOLOGY 9419 1% 2% 40
10 JOURNAL OF MOLECULAR BIOLOGY 9382 5% 1% 153

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PROTEIN STRUCTURE PREDICTION 2454188 14% 54% 474 Search PROTEIN+STRUCTURE+PREDICTION Search PROTEIN+STRUCTURE+PREDICTION
2 FOLD RECOGNITION 773430 4% 60% 135 Search FOLD+RECOGNITION Search FOLD+RECOGNITION
3 CASP 727237 3% 71% 107 Search CASP Search CASP
4 THREADING 709592 4% 58% 127 Search THREADING Search THREADING
5 KNOWLEDGE BASED POTENTIALS 351437 2% 62% 59 Search KNOWLEDGE+BASED+POTENTIALS Search KNOWLEDGE+BASED+POTENTIALS
6 STATISTICAL POTENTIALS 277733 2% 55% 53 Search STATISTICAL+POTENTIALS Search STATISTICAL+POTENTIALS
7 STRUCTURE PREDICTION 271937 4% 20% 145 Search STRUCTURE+PREDICTION Search STRUCTURE+PREDICTION
8 PROTEIN THREADING 257467 1% 73% 37 Search PROTEIN+THREADING Search PROTEIN+THREADING
9 LOOP MODELING 216395 1% 59% 38 Search LOOP+MODELING Search LOOP+MODELING
10 PROTEIN SECONDARY STRUCTURE PREDICTION 215247 1% 61% 37 Search PROTEIN+SECONDARY+STRUCTURE+PREDICTION Search PROTEIN+SECONDARY+STRUCTURE+PREDICTION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 6983 PROTEIN STRUCTURE ALIGNMENT//PROTEIN STRUCTURE COMPARISON//PROTEIN FOLD
2 19158 COMPUTER APPLICATIONS IN THE BIOSCIENCES//AG MOLEK BIOINFORMAT//PAIR PREFERENCES
3 13540 COMPUTATIONAL PROTEIN DESIGN//PROTEIN DESIGN//DEAD END ELIMINATION
4 27069 BIOINFORMAT TELEMED//STEPWISE FOLDING//ALPHA ALPHA HAIRPIN
5 16243 BAKER CHEM CHEM BIOL//UNRES FORCE FIELD//CONFORMATIONAL SPACE ANNEALING
6 23243 HP MODEL//AB OFF LATTICE MODEL//PROTEIN FOLDING PROBLEM
7 18783 INVERSE ISING PROBLEM//CORRELATED MUTATIONS//DIRECT COUPLING ANALYSIS
8 1990 MULTIPLE SEQUENCE ALIGNMENT//SEQUENCE ALIGNMENT//COMPUTER APPLICATIONS IN THE BIOSCIENCES
9 33482 LINEAR BINDING MOTIFS//ROSETTA FLEXPEPDOCK//COMPUTATIONAL PEPTIDOLOGY
10 37681 NACL PESQUISA AGROPECUARIA//NUCLEO BIOINFORMAT ESTRUTURAL//AMINO ACID COLOURING

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