Class information for:
Level 1: T6SS//TYPE VI SECRETION//TYPE VI SECRETION SYSTEM

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
391 3       QUORUM SENSING//BURKHOLDERIA PSEUDOMALLEI//BIOFILM 32824
2926 2             BURKHOLDERIA PSEUDOMALLEI//MELIOIDOSIS//BURKHOLDERIA MALLEI 2964
21908 1                   T6SS//TYPE VI SECRETION//TYPE VI SECRETION SYSTEM 424

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 T6SS authKW 1070350 6% 60% 24
2 TYPE VI SECRETION authKW 1022932 4% 81% 17
3 TYPE VI SECRETION SYSTEM authKW 854786 5% 50% 23
4 VGRG authKW 528576 2% 89% 8
5 TYPE SIX SECRETION SYSTEM authKW 382273 1% 86% 6
6 BACTERIAL COMPETITION authKW 339496 3% 35% 13
7 CONTACT DEPENDENT GROWTH INHIBITION authKW 334487 1% 75% 6
8 TOXIN IMMUNITY PROTEINS authKW 297325 1% 100% 4
9 TRNASE ACTIVITY authKW 297325 1% 100% 4
10 BIOMOL SCI ENGN PROGRAM address 279856 7% 13% 30

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Microbiology 8429 58% 0% 247
2 Biochemistry & Molecular Biology 843 38% 0% 163
3 Parasitiology 571 7% 0% 31
4 Virology 373 8% 0% 32
5 Infectious Diseases 140 6% 0% 26
6 Biochemical Research Methods 115 6% 0% 27
7 Cell Biology 97 10% 0% 41
8 Biophysics 84 6% 0% 26
9 Crystallography 77 4% 0% 18
10 Immunology 47 7% 0% 29

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BIOMOL SCI ENGN PROGRAM 279856 7% 13% 30
2 LISMUMR 7255 222994 1% 100% 3
3 INGN SYST MACROMOL 215107 6% 12% 24
4 MICROBIOL MEDITERRANEE 186108 6% 10% 24
5 CNRS UMR 7255 167244 1% 75% 3
6 UMR 7255 157399 1% 35% 6
7 BEAMLINE SCI 148662 0% 100% 2
8 CNRSUMR 7255 148662 0% 100% 2
9 HERITAGE MED 6 22 148662 0% 100% 2
10 IMMUMR 7255 148662 0% 100% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CELL HOST & MICROBE 9365 3% 1% 12
2 PLOS PATHOGENS 3602 4% 0% 17
3 MBIO 3587 2% 0% 10
4 MOLECULAR MICROBIOLOGY 2959 5% 0% 22
5 CURRENT OPINION IN MICROBIOLOGY 2547 2% 0% 8
6 FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY 2399 1% 1% 6
7 VIRULENCE 2064 1% 1% 4
8 ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS 1851 2% 0% 9
9 TRENDS IN MICROBIOLOGY 1444 1% 0% 6
10 JOURNAL OF BACTERIOLOGY 1151 5% 0% 23

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 T6SS 1070350 6% 60% 24 Search T6SS Search T6SS
2 TYPE VI SECRETION 1022932 4% 81% 17 Search TYPE+VI+SECRETION Search TYPE+VI+SECRETION
3 TYPE VI SECRETION SYSTEM 854786 5% 50% 23 Search TYPE+VI+SECRETION+SYSTEM Search TYPE+VI+SECRETION+SYSTEM
4 VGRG 528576 2% 89% 8 Search VGRG Search VGRG
5 TYPE SIX SECRETION SYSTEM 382273 1% 86% 6 Search TYPE+SIX+SECRETION+SYSTEM Search TYPE+SIX+SECRETION+SYSTEM
6 BACTERIAL COMPETITION 339496 3% 35% 13 Search BACTERIAL+COMPETITION Search BACTERIAL+COMPETITION
7 CONTACT DEPENDENT GROWTH INHIBITION 334487 1% 75% 6 Search CONTACT+DEPENDENT+GROWTH+INHIBITION Search CONTACT+DEPENDENT+GROWTH+INHIBITION
8 TOXIN IMMUNITY PROTEINS 297325 1% 100% 4 Search TOXIN+IMMUNITY+PROTEINS Search TOXIN+IMMUNITY+PROTEINS
9 TRNASE ACTIVITY 297325 1% 100% 4 Search TRNASE+ACTIVITY Search TRNASE+ACTIVITY
10 TYPE 6 SECRETION SYSTEM 237858 1% 80% 4 Search TYPE+6+SECRETION+SYSTEM Search TYPE+6+SECRETION+SYSTEM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 36259 TENEURIN//ODZ//TEN M
2 16887 SOCIAL EVOLUTION//CROSS FEEDING//SOCIAL MICROBES
3 31706 COSTELYTRA ZEALANDICA//SERRATIA ENTOMOPHILA//AMBER DISEASE
4 8590 COLICIN//COLICIN E1//PYOCIN
5 10438 AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX
6 4554 BURKHOLDERIA PSEUDOMALLEI//MELIOIDOSIS//BURKHOLDERIA MALLEI
7 15504 EDWARDSIELLA TARDA//EDWARDSIELLA ICTALURI//EDWARDSIELLOSIS
8 8636 C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP
9 4141 DNA PACKAGING//TERMINASE//BACTERIOPHAGE P22
10 26813 BACTERIAL FRUIT BLOTCH//DIDYMELLA BRYONIAE//GUMMY STEM BLIGHT

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