Class information for:
Level 1: C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
391 3       QUORUM SENSING//BURKHOLDERIA PSEUDOMALLEI//BIOFILM 32824
979 2             QUORUM SENSING//BIOFILM//N ACYL HOMOSERINE LACTONE 10894
8636 1                   C DI GMP//DIGUANYLATE CYCLASE//CYCLIC DI GMP 1264

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 C DI GMP authKW 1677421 8% 63% 106
2 DIGUANYLATE CYCLASE authKW 751444 3% 84% 36
3 CYCLIC DI GMP authKW 452053 2% 58% 31
4 C DI AMP authKW 290116 1% 73% 16
5 GGDEF authKW 251401 1% 92% 11
6 PILZ authKW 251401 1% 92% 11
7 EAL DOMAIN authKW 224387 1% 75% 12
8 INFORMAT SCI HUMAN INFORMAT address 211186 1% 71% 12
9 CORE UNIT METABOL address 179493 1% 40% 18
10 GGDEF DOMAIN authKW 177453 1% 65% 11

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Microbiology 24684 58% 0% 730
2 Biochemistry & Molecular Biology 1622 32% 0% 404
3 Biotechnology & Applied Microbiology 353 8% 0% 107
4 Biophysics 130 5% 0% 60
5 Biochemical Research Methods 91 4% 0% 48
6 Parasitiology 75 2% 0% 23
7 Infectious Diseases 75 3% 0% 39
8 Virology 46 2% 0% 25
9 Immunology 36 5% 0% 57
10 Cell Biology 31 5% 0% 60

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 INFORMAT SCI HUMAN INFORMAT 211186 1% 71% 12
2 CORE UNIT METABOL 179493 1% 40% 18
3 SING ORE ENVIRONM LIFE SCI ENGN 99737 3% 11% 37
4 COSTERTON BIOFILM 70986 1% 19% 15
5 BIOL SINISA STANKOVIC IBISS 66484 0% 67% 4
6 NCHU AGR BIOTECHNOL 56985 0% 57% 4
7 UPR9027 50474 1% 23% 9
8 CELL REGULATORY MECH 49865 0% 100% 2
9 CYPRINID FISH 49865 0% 100% 2
10 LOEWE SYNMIKRO 49865 0% 100% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 JOURNAL OF BACTERIOLOGY 17685 12% 0% 154
2 MOLECULAR MICROBIOLOGY 14515 7% 1% 84
3 ENVIRONMENTAL MICROBIOLOGY 10358 3% 1% 41
4 ENVIRONMENTAL MICROBIOLOGY REPORTS 6948 1% 2% 15
5 MICROBIOLOGY-SGM 4029 3% 0% 36
6 MBIO 3462 1% 1% 17
7 CURRENT OPINION IN MICROBIOLOGY 2245 1% 1% 13
8 PLOS PATHOGENS 1819 2% 0% 21
9 RESEARCH IN MICROBIOLOGY 1548 1% 0% 13
10 MICROBIOLOGYOPEN 1400 0% 1% 5

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 C DI GMP 1677421 8% 63% 106 Search C+DI+GMP Search C+DI+GMP
2 DIGUANYLATE CYCLASE 751444 3% 84% 36 Search DIGUANYLATE+CYCLASE Search DIGUANYLATE+CYCLASE
3 CYCLIC DI GMP 452053 2% 58% 31 Search CYCLIC+DI+GMP Search CYCLIC+DI+GMP
4 C DI AMP 290116 1% 73% 16 Search C+DI+AMP Search C+DI+AMP
5 GGDEF 251401 1% 92% 11 Search GGDEF Search GGDEF
6 PILZ 251401 1% 92% 11 Search PILZ Search PILZ
7 EAL DOMAIN 224387 1% 75% 12 Search EAL+DOMAIN Search EAL+DOMAIN
8 GGDEF DOMAIN 177453 1% 65% 11 Search GGDEF+DOMAIN Search GGDEF+DOMAIN
9 DIADENYLATE CYCLASE 174528 1% 100% 7 Search DIADENYLATE+CYCLASE Search DIADENYLATE+CYCLASE
10 CYCLIC DI AMP 168290 1% 75% 9 Search CYCLIC+DI+AMP Search CYCLIC+DI+AMP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 16277 BIOFILM GRP//BIOFILM ENGN//BIOFILM
2 22906 CURLI//CURLI FIMBRIAE//FUNCTIONAL AMYLOID
3 22523 FIXL//COOA//HEME SENSOR
4 11890 TYPE IV PILI//TYPE II SECRETION//GENERAL SECRETORY PATHWAY
5 553 QUORUM SENSING//N ACYL HOMOSERINE LACTONE//QUORUM QUENCHING
6 6827 ALGINATE LYASE//ALGINATE//ALGINATE OLIGOSACCHARIDES
7 17065 CAULOBACTER//CAULOBACTER CRESCENTUS//CTRA
8 21908 T6SS//TYPE VI SECRETION//TYPE VI SECRETION SYSTEM
9 8503 BACTERIAL BLIGHT//XANTHOMONAS ORYZAE PV ORYZAE//BACTERIAL BLIGHT OF RICE
10 11674 RIBOSWITCH//RNA SWITCH//APTAZYME

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