Class information for:
Level 1: RHODOPSIN//RETINAL//BATHORHODOPSIN

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
5 4 NEUROSCIENCES//CLINICAL NEUROLOGY//PSYCHOLOGY, EXPERIMENTAL 1830502
331 3       BACTERIORHODOPSIN//G PROTEIN COUPLED RECEPTOR//PHOSPHODIESTERASE 38085
1013 2             G PROTEIN COUPLED RECEPTOR//GPR40//GPCR 10639
2409 1                   RHODOPSIN//RETINAL//BATHORHODOPSIN 2293

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 RHODOPSIN authKW 673161 10% 22% 225
2 RETINAL authKW 142205 3% 16% 65
3 BATHORHODOPSIN authKW 123687 0% 100% 9
4 ZENTRUM BIOPHYS BIOINFORMAT address 109928 1% 50% 16
5 PROTONATED SCHIFF BASE authKW 91613 0% 67% 10
6 RETINAL CHROMOPHORE authKW 91613 0% 67% 10
7 MOL MED ZELLFOR address 84795 1% 22% 28
8 ARBEITSGRP BIOPHYS address 79507 0% 64% 9
9 METARHODOPSIN II authKW 74820 0% 78% 7
10 METARHODOPSIN III authKW 68715 0% 100% 5

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemistry & Molecular Biology 10891 56% 0% 1294
2 Biophysics 8140 22% 0% 504
3 Chemistry, Physical 767 15% 0% 344
4 Physics, Atomic, Molecular & Chemical 700 8% 0% 185
5 Chemistry, Multidisciplinary 535 13% 0% 291
6 Ophthalmology 266 4% 0% 81
7 Biochemical Research Methods 260 4% 0% 103
8 Cell Biology 111 6% 0% 131
9 Chemistry, Organic 41 4% 0% 84
10 Computer Science, Interdisciplinary Applications 22 2% 0% 35

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 ZENTRUM BIOPHYS BIOINFORMAT 109928 1% 50% 16
2 MOL MED ZELLFOR 84795 1% 22% 28
3 ARBEITSGRP BIOPHYS 79507 0% 64% 9
4 THEORET LOW TEMP PHYS 54972 0% 100% 4
5 SECT FLUO CENCE STUDIES 44972 0% 55% 6
6 BIOTECNOL MOL 44599 1% 19% 17
7 CHIM THEOR MODELISAT MOL ST JEROME 41229 0% 100% 3
8 SECT NMR 30920 0% 75% 3
9 FARKASH LIGHT INDUCED PROC 27486 0% 100% 2
10 NSWC CRANE 27486 0% 100% 2

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 BIOCHEMISTRY 26619 14% 1% 323
2 PHOTOCHEMISTRY AND PHOTOBIOLOGY 17432 5% 1% 104
3 PHOTOBIOCHEMISTRY AND PHOTOBIOPHYSICS 6827 1% 3% 15
4 BIOPHYSICS OF STRUCTURE AND MECHANISM 6525 0% 7% 7
5 BIOPHYSICAL JOURNAL 6412 4% 0% 97
6 PROGRESS IN RETINAL RESEARCH 5372 0% 13% 3
7 METHODS IN ENZYMOLOGY 5143 3% 0% 80
8 JOURNAL OF THE AMERICAN CHEMICAL SOCIETY 2529 6% 0% 136
9 VISION RESEARCH 2523 2% 0% 42
10 JOURNAL OF CHEMICAL THEORY AND COMPUTATION 2470 1% 1% 30

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 RHODOPSIN 673161 10% 22% 225 Search RHODOPSIN Search RHODOPSIN
2 RETINAL 142205 3% 16% 65 Search RETINAL Search RETINAL
3 BATHORHODOPSIN 123687 0% 100% 9 Search BATHORHODOPSIN Search BATHORHODOPSIN
4 PROTONATED SCHIFF BASE 91613 0% 67% 10 Search PROTONATED+SCHIFF+BASE Search PROTONATED+SCHIFF+BASE
5 RETINAL CHROMOPHORE 91613 0% 67% 10 Search RETINAL+CHROMOPHORE Search RETINAL+CHROMOPHORE
6 METARHODOPSIN II 74820 0% 78% 7 Search METARHODOPSIN+II Search METARHODOPSIN+II
7 METARHODOPSIN III 68715 0% 100% 5 Search METARHODOPSIN+III Search METARHODOPSIN+III
8 11 CIS RETINAL 58047 1% 33% 13 Search 11+CIS+RETINAL Search 11+CIS+RETINAL
9 G PROTEIN COUPLED RECEPTOR 56255 6% 3% 142 Search G+PROTEIN+COUPLED+RECEPTOR Search G+PROTEIN+COUPLED+RECEPTOR
10 LUMIRHODOPSIN 54972 0% 100% 4 Search LUMIRHODOPSIN Search LUMIRHODOPSIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 5605 MEMBRANE PROT STRUCT FUNCT UNIT//G PROTEIN COUPLED RECEPTOR//GPCR
2 189 BACTERIORHODOPSIN//PURPLE MEMBRANE//PHOTOCYCLE
3 2756 PHOTOTRANSDUCTION//CYCLIC NUCLEOTIDE GATED CHANNEL//RETINAL RODS
4 20955 PHOTOACTIVE YELLOW PROTEIN//PHOTOACTIVE YELLOW PROTEIN PYP//XANTHOPSINS
5 16327 CONICAL INTERSECTIONS//PREVITAMIN D//INTERSYSTEM CROSSING POINT
6 8638 HETEROMER//RECEPTOR MOSAICS//RECEPTOR RECEPTOR INTERACTIONS
7 18763 INTRINSIC LIGAND ACTIVITY//RECEPTOR THEORY//MOL PHARMACOL GRP
8 8564 VISUAL CYCLE//RPE65//LEBER CONGENITAL AMAUROSIS
9 11370 TRICHROMACY//COLOR VISION//CONE PHOTOPIGMENTS
10 7527 VISUAL PIGMENT//VISUAL PIGMENTS//OPSIN

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