Class information for:
Level 2: PROTEASOME//UBIQUITIN//SUMO

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
203 3       AUTOPHAGY//HEAT SHOCK PROTEIN//PROTEASOME 52353
661 2             PROTEASOME//UBIQUITIN//SUMO 13805
1011 1                   PROTEASOME//MULTICATALYTIC PROTEINASE//20S PROTEASOME 2931
3336 1                   DEUBIQUITINATING ENZYME//DEUBIQUITINASE//UBIQUITIN 2040
3639 1                   SUMO//SUMOYLATION//UBC9 1974
5064 1                   PROTEASOME INHIBITOR//BORTEZOMIB//PROTEASOME 1709
8177 1                   POLYUBIQUITIN GENE//UBIQUITIN//UBIQUITIN CONJUGATING ENZYME 1307
9946 1                   NEDD8//COP9 SIGNALOSOME//NEDDYLATION 1137
16862 1                   FBXW7//FBW7//FBXO7 657
21395 1                   UCH L1//UBIQUITIN CARBOXY TERMINAL HYDROLASE L1//DEGENERAT NEUROL DIS 444
22892 1                   ISG15//ISGYLATION//USP18 387
24088 1                   MOLECULAR MISREADING//SKIN BARRIER NETWORK HUMAN OURCES DEV TEAM BK2//DUAL HIT 347
24344 1                   FAT10//MALLORY BODIES//MALLORY DENK BODIES MDBS 338
30936 1                   PUPYLATION//PROKARYOTIC UBIQUITIN LIKE PROTEIN//PAFA 175
34278 1                   UBIQUILIN 1//UBIQUILIN//UBQLN1 127
36663 1                   UBCH10//UBE2C//UBE2Q1 95
37735 1                   EXOGENOUS UBIQUITIN//EXTRACELLULAR UBIQUITIN//MARTHASTERIAS GLACIALIS L 77
38538 1                   UFM1//UBIQUITIN FOLD MODIFIER 1//UBA5 60

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROTEASOME authKW 999160 10% 31% 1400
2 UBIQUITIN authKW 861186 10% 29% 1322
3 SUMO authKW 469680 3% 57% 360
4 SUMOYLATION authKW 327823 2% 46% 310
5 PROTEASOME INHIBITOR authKW 284971 3% 36% 350
6 IMMUNOPROTEASOME authKW 227982 1% 74% 136
7 NEDD8 authKW 222597 1% 81% 121
8 BORTEZOMIB authKW 171771 3% 21% 363
9 20S PROTEASOME authKW 165197 1% 66% 110
10 UBC9 authKW 162158 1% 66% 108

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Biochemistry & Molecular Biology 49356 50% 0% 6859
2 Cell Biology 38825 28% 1% 3870
3 Biophysics 6172 9% 0% 1185
4 Oncology 6001 13% 0% 1757
5 Genetics & Heredity 1499 6% 0% 795
6 Biochemical Research Methods 816 4% 0% 488
7 Developmental Biology 592 2% 0% 233
8 Pathology 485 2% 0% 325
9 Chemistry, Medicinal 341 2% 0% 314
10 Hematology 270 2% 0% 303

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PROT METAB 29321 0% 26% 50
2 BIOTECHNOL THURGAU 26557 0% 45% 26
3 BIOMOL STRUCT ORG 23544 0% 27% 39
4 CELL BIOL METAB GRP 20281 0% 68% 13
5 PROT PROC SECT 19005 0% 83% 10
6 DEGENERAT NEUROL DIS 18483 0% 18% 44
7 NEW FRONTIER SCI 17183 0% 54% 14
8 CLIN PHYS MED 15953 0% 50% 14
9 ACUTE LUNG INJURY EXCELLENCE 15690 0% 33% 21
10 BIOCHEM CCM 15392 0% 75% 9

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MOLECULAR CELL 20244 2% 4% 226
2 JOURNAL OF BIOLOGICAL CHEMISTRY 14479 7% 1% 1029
3 ENZYME & PROTEIN 7297 0% 19% 17
4 CELL DIVISION 6274 0% 12% 24
5 NATURE STRUCTURAL & MOLECULAR BIOLOGY 5179 1% 3% 72
6 EMBO REPORTS 4685 0% 3% 69
7 EMBO JOURNAL 4648 1% 1% 194
8 MOLECULAR & CELLULAR PROTEOMICS 3861 1% 2% 75
9 FEBS LETTERS 3572 2% 1% 268
10 BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS 3497 3% 1% 350

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PROTEASOME 999160 10% 31% 1400 Search PROTEASOME Search PROTEASOME
2 UBIQUITIN 861186 10% 29% 1322 Search UBIQUITIN Search UBIQUITIN
3 SUMO 469680 3% 57% 360 Search SUMO Search SUMO
4 SUMOYLATION 327823 2% 46% 310 Search SUMOYLATION Search SUMOYLATION
5 PROTEASOME INHIBITOR 284971 3% 36% 350 Search PROTEASOME+INHIBITOR Search PROTEASOME+INHIBITOR
6 IMMUNOPROTEASOME 227982 1% 74% 136 Search IMMUNOPROTEASOME Search IMMUNOPROTEASOME
7 NEDD8 222597 1% 81% 121 Search NEDD8 Search NEDD8
8 BORTEZOMIB 171771 3% 21% 363 Search BORTEZOMIB Search BORTEZOMIB
9 20S PROTEASOME 165197 1% 66% 110 Search 20S+PROTEASOME Search 20S+PROTEASOME
10 UBC9 162158 1% 66% 108 Search UBC9 Search UBC9

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 2798 CALRETICULIN//ERAD//P97
2 3519 PEPTIDE DEFORMYLASE//ARGINYLATION//N END RULE
3 2278 NF KAPPA B//A20//I KAPPA B
4 2628 TAPASIN//TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING//ANTIGEN PROCESSING
5 3687 CEREBLON//PROTEIN KNOCKDOWN//BIMOLECULAR FLUORESCENCE COMPLEMENTATION
6 1541 ALPHA SYNUCLEIN//PARKIN//LRRK2
7 3939 PHARMACEUT CHEM BIOANALYT//TIP49//REPTIN
8 1147 AUTOPHAGY//BECLIN 1//LC3
9 2458 ACUTE PROMYELOCYTIC LEUKEMIA//ARSENIC TRIOXIDE//APL
10 454 CELL CYCLE//CYCLIN DEPENDENT KINASE//E2F

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