Class information for:
Level 2: PLASMID//SITE SPECIFIC RECOMBINATION//JOURNAL OF BACTERIOLOGY

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
17 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//MICROBIOLOGY//JOURNAL OF BACTERIOLOGY 725599
57 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 94459
938 2             PLASMID//SITE SPECIFIC RECOMBINATION//JOURNAL OF BACTERIOLOGY 11208
4209 1                   DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE 1860
7895 1                   SITE SPECIFIC RECOMBINATION//SERINE RECOMBINASE//TYROSINE RECOMBINASE 1340
7986 1                   BACTERIAL CONJUGATION//RELAXASE//COUPLING PROTEIN 1332
8256 1                   PLASMID//REPLICATION CONTROL//PLASMID R6K 1301
8354 1                   ORIC//DNAA//DNAA PROTEIN 1291
8808 1                   H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN 1246
10526 1                   DNA SEGREGATION//PLASMID PARTITIONING//PARB 1085
19738 1                   SKIRBALL PROGRAM MOL PATHOGENESIS//RETRON//MSDNA 514
21068 1                   AIST TSUKUBA 6 10//FFRP//LEUCINE RESPONSIVE REGULATORY PROTEIN 457
27550 1                   I CEUI//KAUFFMANN WHITE SCHEME//ANTIMICROBIAL MONITORING 246
27643 1                   BACTERIOPHAGE LAMBDA DEVELOPMENT//LAMBDA PLASMIDS//COLIPHAGE LAMBDA 244
31981 1                   BACTERIOL IMMUNOL DEV//GLUCONATE PERMEASE//GNTP FAMILY 158
33734 1                   MINIATURE INSERTION SEQUENCE//BIME//REP SEQUENCES 134

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PLASMID journal 305799 4% 23% 473
2 SITE SPECIFIC RECOMBINATION authKW 282099 2% 46% 218
3 JOURNAL OF BACTERIOLOGY journal 223787 15% 5% 1629
4 ORIC authKW 172099 1% 84% 73
5 DNAA authKW 164568 1% 72% 81
6 H NS authKW 136257 1% 58% 83
7 MOLECULAR MICROBIOLOGY journal 125308 7% 6% 735
8 BACTERIAL CONJUGATION authKW 122979 1% 72% 61
9 DNAA PROTEIN authKW 110148 0% 93% 42
10 MICROBIOLOGY WoSSC 103418 40% 1% 4506

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Microbiology 103418 40% 1% 4506
2 Biochemistry & Molecular Biology 41759 51% 0% 5672
3 Genetics & Heredity 21330 19% 0% 2132
4 Cell Biology 3690 11% 0% 1248
5 Biophysics 874 4% 0% 481
6 Biology 767 3% 0% 342
7 Biotechnology & Applied Microbiology 497 4% 0% 490
8 Virology 355 2% 0% 211
9 Biochemical Research Methods 112 2% 0% 232
10 Developmental Biology 35 1% 0% 83

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MICROBIOL GENET MOL 85819 1% 26% 118
2 PHYSIOL BACTERIENNE 37188 0% 88% 15
3 SKIRBALL PROGRAM MOL PATHOGENESIS 32690 0% 73% 16
4 AIST TSUKUBA 6 10 31125 0% 92% 12
5 NIBHT 19993 0% 65% 11
6 LEIDEN CHEM CELL OBSERV 19670 0% 100% 7
7 POLISH SCI 16419 0% 16% 36
8 UMR5100 14900 0% 30% 18
9 TSUKUBA 6 10 14050 0% 100% 5
10 SECT MOL GENET MICROBIOL 13097 0% 9% 54

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PLASMID 305799 4% 23% 473
2 JOURNAL OF BACTERIOLOGY 223787 15% 5% 1629
3 MOLECULAR MICROBIOLOGY 125308 7% 6% 735
4 MOLECULAR AND GENERAL GENETICS 66120 3% 7% 341
5 JOURNAL OF MOLECULAR BIOLOGY 43913 5% 3% 610
6 MOLECULAR & GENERAL GENETICS 38563 2% 8% 179
7 NUCLEIC ACIDS RESEARCH 24974 5% 2% 610
8 GENE 16399 3% 2% 344
9 EMBO JOURNAL 16116 3% 2% 319
10 CELL 10177 2% 2% 239

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 SITE SPECIFIC RECOMBINATION 282099 2% 46% 218 Search SITE+SPECIFIC+RECOMBINATION Search SITE+SPECIFIC+RECOMBINATION
2 ORIC 172099 1% 84% 73 Search ORIC Search ORIC
3 DNAA 164568 1% 72% 81 Search DNAA Search DNAA
4 H NS 136257 1% 58% 83 Search H+NS Search H+NS
5 BACTERIAL CONJUGATION 122979 1% 72% 61 Search BACTERIAL+CONJUGATION Search BACTERIAL+CONJUGATION
6 DNAA PROTEIN 110148 0% 93% 42 Search DNAA+PROTEIN Search DNAA+PROTEIN
7 DNA TRANSPOSITION 102499 0% 79% 46 Search DNA+TRANSPOSITION Search DNA+TRANSPOSITION
8 HISTONE LIKE PROTEIN 86971 0% 61% 51 Search HISTONE+LIKE+PROTEIN Search HISTONE+LIKE+PROTEIN
9 PHAGE MU 81948 0% 83% 35 Search PHAGE+MU Search PHAGE+MU
10 NUCLEOID ASSOCIATED PROTEIN 78854 0% 70% 40 Search NUCLEOID+ASSOCIATED+PROTEIN Search NUCLEOID+ASSOCIATED+PROTEIN

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 2032 FTSZ//PEPTIDOGLYCAN//TEICHOIC ACID
2 3031 TOXIN ANTITOXIN SYSTEM//TOXIN ANTITOXIN//OXYR
3 1638 LACTOCOCCUS LACTIS//BACILLUS SUBTILIS//JOURNAL OF BACTERIOLOGY
4 1055 BACTERIOPHAGE//PHAGE THERAPY//ENDOLYSIN
5 114 DNA POLYMERASE//WERNER SYNDROME//DNA REPLICATION
6 579 RIBOSOME//HFQ//TRANSLATION TERMINATION
7 1241 RNA POLYMERASE//TFIID//RNA POLYMERASE II
8 3408 PROPIDIUM MONOAZIDE//RPOS//VIABLE BUT NONCULTURABLE
9 1743 CROWN GALL//TRANSPOSABLE ELEMENTS//T DNA
10 2030 BACTERIAL CHEMOTAXIS//BACTERIAL FLAGELLUM//JOURNAL OF BACTERIOLOGY

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