Class information for:
Level 2: CROWN GALL//TRANSPOSABLE ELEMENTS//T DNA

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
9 4 PLANT SCIENCES//FOOD SCIENCE & TECHNOLOGY//AGRONOMY 1475572
41 3       PLANT SCIENCES//ARABIDOPSIS//PLANT CELL 105955
1743 2             CROWN GALL//TRANSPOSABLE ELEMENTS//T DNA 6829
2396 1                   CROWN GALL//TI PLASMID//AGROBACTERIUM VITIS 2295
6077 1                   RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS 1561
7081 1                   TRANSPOSON TAGGING//AC DS//ACTIVATION TAGGING 1434
15154 1                   MARKER FREE//MARKER FREE TRANSGENIC PLANTS//SITE SPECIFIC RECOMBINATION 754
17458 1                   BIBAC//BAC LIBRARY//BIBAC LIBRARY 626
31941 1                   CHEMICALLY INDUCIBLE GENE EXPRESSION//ALC SWITCH//ALC SYSTEM 159

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CROWN GALL authKW 332874 2% 70% 103
2 TRANSPOSABLE ELEMENTS authKW 260301 4% 20% 285
3 T DNA authKW 239334 2% 46% 113
4 TI PLASMID authKW 221678 1% 83% 58
5 AGROBACTERIUM authKW 203659 3% 22% 203
6 RETROTRANSPOSON authKW 198309 3% 23% 188
7 AGROBACTERIUM TUMEFACIENS authKW 195152 4% 17% 245
8 LTR RETROTRANSPOSON authKW 167375 1% 52% 70
9 AGROBACTERIUM VITIS authKW 152039 1% 80% 41
10 AC DS authKW 137824 1% 85% 35

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Plant Sciences 57296 40% 0% 2760
2 Genetics & Heredity 39589 32% 0% 2186
3 Biochemistry & Molecular Biology 11726 36% 0% 2466
4 Biotechnology & Applied Microbiology 7546 15% 0% 1038
5 Horticulture 6571 5% 0% 361
6 Agronomy 2997 6% 0% 418
7 Microbiology 2276 9% 0% 611
8 Cell Biology 1443 9% 0% 641
9 Evolutionary Biology 943 3% 0% 195
10 Biochemical Research Methods 546 4% 0% 269

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MTT BI PLANT GENOM 73937 0% 70% 23
2 ARIZONA GENOM 53423 1% 28% 41
3 ARIZONA GENOM COMPUTAT 16974 0% 41% 9
4 SIMPLOT PLANT SCI 14049 0% 38% 8
5 CROP IMPROVEMENT UTILIZAT UNIT 13828 0% 33% 9
6 CLUSIUS 13621 0% 12% 25
7 PLANT GENOME ENGN UNIT 12443 0% 30% 9
8 PLANT GENOME INITIAT RUTGERS 12299 0% 67% 4
9 GENET DEV CELL BIOL 11430 1% 6% 43
10 RICE FUNCT GENOM GRP 11293 0% 35% 7

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PLANT MOLECULAR BIOLOGY 62262 4% 4% 303
2 PLANT JOURNAL 50802 4% 4% 288
3 MOLECULAR AND GENERAL GENETICS 33658 3% 4% 190
4 PLANT CELL REPORTS 26856 3% 3% 179
5 MOBILE DNA 25580 0% 19% 30
6 MOLECULAR & GENERAL GENETICS 23903 2% 5% 110
7 MOLECULAR GENETICS AND GENOMICS 21954 1% 5% 99
8 MAYDICA 16584 1% 5% 71
9 GENETICS 14295 3% 2% 203
10 PLANT CELL 10022 2% 2% 116

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 CROWN GALL 332874 2% 70% 103 Search CROWN+GALL Search CROWN+GALL
2 TRANSPOSABLE ELEMENTS 260301 4% 20% 285 Search TRANSPOSABLE+ELEMENTS Search TRANSPOSABLE+ELEMENTS
3 T DNA 239334 2% 46% 113 Search T+DNA Search T+DNA
4 TI PLASMID 221678 1% 83% 58 Search TI+PLASMID Search TI+PLASMID
5 AGROBACTERIUM 203659 3% 22% 203 Search AGROBACTERIUM Search AGROBACTERIUM
6 RETROTRANSPOSON 198309 3% 23% 188 Search RETROTRANSPOSON Search RETROTRANSPOSON
7 AGROBACTERIUM TUMEFACIENS 195152 4% 17% 245 Search AGROBACTERIUM+TUMEFACIENS Search AGROBACTERIUM+TUMEFACIENS
8 LTR RETROTRANSPOSON 167375 1% 52% 70 Search LTR+RETROTRANSPOSON Search LTR+RETROTRANSPOSON
9 AGROBACTERIUM VITIS 152039 1% 80% 41 Search AGROBACTERIUM+VITIS Search AGROBACTERIUM+VITIS
10 AC DS 137824 1% 85% 35 Search AC+DS Search AC+DS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 868 PIRNA//TRANSPOSABLE ELEMENTS//RETROTRANSPOSON
2 1999 AGROBACTERIUM RHIZOGENES//HAIRY ROOTS//CATHARANTHUS ROSEUS
3 92 PLANT CELL TISSUE AND ORGAN CULTURE//SOMATIC EMBRYOGENESIS//MICROPROPAGATION
4 275 ARABIDOPSIS//PLANT SCIENCES//FLOWER DEVELOPMENT
5 2183 RICE//JAPANESE JOURNAL OF CROP SCIENCE//ORYZA SATIVA
6 3846 BETA VULGARIS//WEED BEET//BETA PROCUMBENS
7 2748 CYTOKININ//GROWTH REGULATORS//CYTOKININ OXIDASE DEHYDROGENASE
8 1914 MARINER//SLEEPING BEAUTY//TRANSGENE
9 2843 SEED STORAGE PROTEIN//OPAQUE 2//STORAGE PROTEINS
10 938 PLASMID//SITE SPECIFIC RECOMBINATION//JOURNAL OF BACTERIOLOGY

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