Class information for:
Level 1: RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
9 4 PLANT SCIENCES//FOOD SCIENCE & TECHNOLOGY//AGRONOMY 1475572
41 3       PLANT SCIENCES//ARABIDOPSIS//PLANT CELL 105955
1743 2             CROWN GALL//TRANSPOSABLE ELEMENTS//T DNA 6829
6077 1                   RETROTRANSPOSON//LTR RETROTRANSPOSON//TRANSPOSABLE ELEMENTS 1561

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 RETROTRANSPOSON authKW 841308 12% 23% 185
2 LTR RETROTRANSPOSON authKW 711911 4% 51% 69
3 TRANSPOSABLE ELEMENTS authKW 539369 13% 14% 196
4 TY1 COPIA authKW 454906 2% 87% 26
5 COPIA authKW 405328 2% 63% 32
6 HELITRON authKW 367917 2% 68% 27
7 RETROTRANSPOSONS authKW 355798 5% 22% 79
8 MTT BI PLANT GENOM address 323613 1% 70% 23
9 TY3 GYPSY authKW 291718 1% 85% 17
10 TY1 COPIA RETROTRANSPOSONS authKW 227453 1% 87% 13

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Genetics & Heredity 30045 57% 0% 890
2 Plant Sciences 6148 28% 0% 441
3 Evolutionary Biology 3390 10% 0% 157
4 Biochemistry & Molecular Biology 2983 38% 0% 590
5 Biotechnology & Applied Microbiology 2263 17% 0% 268
6 Horticulture 1638 6% 0% 86
7 Agronomy 512 5% 0% 84
8 Mathematical & Computational Biology 420 3% 0% 52
9 Biochemical Research Methods 151 4% 0% 66
10 Cell Biology 51 5% 0% 80

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MTT BI PLANT GENOM 323613 1% 70% 23
2 ARIZONA GENOM 67350 1% 15% 22
3 KARYOBIOL GRP 47097 0% 33% 7
4 ARIZONA GENOMICS 40377 0% 100% 2
5 BIOTECHVANA 40377 0% 100% 2
6 IRD UMR DIADE 40377 0% 100% 2
7 PLANT GENOM BIOTECHNOL FOOD 40373 0% 50% 4
8 MISSISSIPPI GENOME EXPLORAT 35886 0% 44% 4
9 VIIKKI BIO 35841 2% 6% 29
10 PLANT GENOME INITIAT RUTGERS 30280 0% 50% 3

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 MOBILE DNA 104758 2% 18% 29
2 MOLECULAR GENETICS AND GENOMICS 45584 4% 3% 68
3 GENOME 10908 3% 1% 47
4 MOLECULAR BIOLOGY AND EVOLUTION 10151 3% 1% 54
5 GENETICA 9672 2% 1% 38
6 GENOME BIOLOGY AND EVOLUTION 9610 2% 2% 27
7 PLANT MOLECULAR BIOLOGY 8952 4% 1% 55
8 PLANT JOURNAL 7506 3% 1% 53
9 GENOME RESEARCH 6887 2% 1% 34
10 BMC GENOMICS 6403 4% 1% 57

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 RETROTRANSPOSON 841308 12% 23% 185 Search RETROTRANSPOSON Search RETROTRANSPOSON
2 LTR RETROTRANSPOSON 711911 4% 51% 69 Search LTR+RETROTRANSPOSON Search LTR+RETROTRANSPOSON
3 TRANSPOSABLE ELEMENTS 539369 13% 14% 196 Search TRANSPOSABLE+ELEMENTS Search TRANSPOSABLE+ELEMENTS
4 TY1 COPIA 454906 2% 87% 26 Search TY1+COPIA Search TY1+COPIA
5 COPIA 405328 2% 63% 32 Search COPIA Search COPIA
6 HELITRON 367917 2% 68% 27 Search HELITRON Search HELITRON
7 RETROTRANSPOSONS 355798 5% 22% 79 Search RETROTRANSPOSONS Search RETROTRANSPOSONS
8 TY3 GYPSY 291718 1% 85% 17 Search TY3+GYPSY Search TY3+GYPSY
9 TY1 COPIA RETROTRANSPOSONS 227453 1% 87% 13 Search TY1+COPIA+RETROTRANSPOSONS Search TY1+COPIA+RETROTRANSPOSONS
10 INTER RETROTRANSPOSON AMPLIFIED POLYMORPHISM 168234 1% 83% 10 Search INTER+RETROTRANSPOSON+AMPLIFIED+POLYMORPHISM Search INTER+RETROTRANSPOSON+AMPLIFIED+POLYMORPHISM

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 1


rank cluster_id2 link
1 7081 TRANSPOSON TAGGING//AC DS//ACTIVATION TAGGING
2 18404 TY1//SECT EUKARYOT TRANSPOSABLE ELEMENTS//TY ELEMENTS
3 2921 P ELEMENT//HYBRID DYSGENESIS//TRANSPOSABLE ELEMENTS
4 11072 MARINER//SLEEPING BEAUTY//TRANSPOSON
5 17458 BIBAC//BAC LIBRARY//BIBAC LIBRARY
6 1638 SINE//LINE 1//BIOL COMPUTAT VISUALIZAT
7 3067 MSAP//RNA DIRECTED DNA METHYLATION//RDDM
8 32677 BRACHYPODIUM DISTACHYON//BRACHYPODIUM//BRACHYPODIUM STACEI
9 11463 GENOME SIZE//NUCLEAR DNA CONTENT//C VALUE
10 19750 SATELLITE DNA//SATELLITE DNA EVOLUTION//CONCERTED EVOLUTION

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