Class information for:
Level 2: PIRNA//TRANSPOSABLE ELEMENTS//RETROTRANSPOSON

Basic class information
Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 ONCOLOGY//CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY 2934640
55 3       CELL BIOLOGY//BIOCHEMISTRY & MOLECULAR BIOLOGY//CHROMATIN 94586
868 2             PIRNA//TRANSPOSABLE ELEMENTS//RETROTRANSPOSON 11669
1638 1                   SINE//LINE 1//BIOL COMPUTAT VISUALIZAT 2582
2921 1                   P ELEMENT//HYBRID DYSGENESIS//TRANSPOSABLE ELEMENTS 2143
7435 1                   HETEROCHROMATIN//HP1//POSITION EFFECT VARIEGATION 1393
9411 1                   SEX LETHAL//DOSAGE COMPENSATION//DOUBLESEX 1191
9428 1                   PIRNA//PIWI//PIWI INTERACTING RNA 1189
12111 1                   CONTROL GENET PROC//CTCF//CHROMATIN INSULATOR 959
13684 1                   DNA PUFF//CHROMOSOMA//HSR OMEGA 850
19153 1                   POKEY//LAMPBRUSH LOOPS//DROSOPHILA HYDEI CELL LINE KUN DH 33 541
22750 1                   BANDING SEQUENCES//CHIRONOMUS//POLYTENE CHROMOSOMES 392
26145 1                   HET A//TART//DROSOPHILA TELOMERES 283
32842 1                   DICENTRIC AUTOSOMAL COMPOUND//FREE ARM//MULTIPOLAR MITOSES 146

Terms with highest relevance score


rank Category termType chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 PIRNA authKW 434474 2% 71% 227
2 TRANSPOSABLE ELEMENTS authKW 304453 3% 28% 403
3 RETROTRANSPOSON authKW 242850 2% 33% 272
4 PIWI authKW 216448 1% 70% 114
5 CHROMOSOMA journal 183453 4% 16% 429
6 GENETICS & HEREDITY WoSSC 170821 50% 1% 5826
7 P ELEMENT authKW 147974 1% 57% 96
8 HETEROCHROMATIN authKW 144324 3% 18% 295
9 SINE authKW 140917 1% 50% 105
10 CONTROL GENET PROC address 133383 0% 92% 54

Web of Science journal categories


chi_square_rank Category chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 Genetics & Heredity 170821 50% 1% 5826
2 Biochemistry & Molecular Biology 34219 46% 0% 5311
3 Cell Biology 24111 24% 0% 2843
4 Developmental Biology 11572 7% 1% 773
5 Evolutionary Biology 7767 6% 0% 672
6 CYTOLOGY & HISTOLOGY 2799 1% 1% 91
7 Biology 2081 4% 0% 520
8 Biotechnology & Applied Microbiology 887 5% 0% 608
9 Entomology 331 2% 0% 207
10 Biophysics 269 3% 0% 337

Address terms


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CONTROL GENET PROC 133383 0% 92% 54
2 BIOL COMPUTAT VISUALIZAT 106911 1% 64% 62
3 GENE BIOL 65302 1% 16% 155
4 CYTOL GENET 29800 2% 6% 195
5 EUKARYOT GENOME EVOLUT 27212 0% 92% 11
6 DIPARTIMENTO GENET BIOL MOL 22447 1% 13% 62
7 DYNAM GENOME EVOLUT 22432 0% 40% 21
8 WATSON BIOL SCI 20866 0% 17% 45
9 YALE STEM CELL 18675 0% 18% 38
10 IMMUNOEPIGENET 15699 0% 73% 8

Journals


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass
1 CHROMOSOMA 183453 4% 16% 429
2 GENETICS 112824 6% 6% 740
3 MOBILE DNA 66047 1% 39% 63
4 GENETIKA 61476 3% 7% 317
5 GENETICA 50676 2% 8% 238
6 RUSSIAN JOURNAL OF GENETICS 33623 2% 6% 210
7 GENETICAL RESEARCH 27970 1% 11% 92
8 MOLECULAR BIOLOGY AND EVOLUTION 17690 2% 3% 196
9 JOURNAL OF MOLECULAR EVOLUTION 16003 1% 4% 152
10 NUCLEIC ACIDS RESEARCH 15583 4% 1% 495

Author Key Words


chi_square_rank term chi_square shrOfCwithTerm shrOfTermInClass termInClass LCSH search Wikipedia search
1 PIRNA 434474 2% 71% 227 Search PIRNA Search PIRNA
2 TRANSPOSABLE ELEMENTS 304453 3% 28% 403 Search TRANSPOSABLE+ELEMENTS Search TRANSPOSABLE+ELEMENTS
3 RETROTRANSPOSON 242850 2% 33% 272 Search RETROTRANSPOSON Search RETROTRANSPOSON
4 PIWI 216448 1% 70% 114 Search PIWI Search PIWI
5 P ELEMENT 147974 1% 57% 96 Search P+ELEMENT Search P+ELEMENT
6 HETEROCHROMATIN 144324 3% 18% 295 Search HETEROCHROMATIN Search HETEROCHROMATIN
7 SINE 140917 1% 50% 105 Search SINE Search SINE
8 LINE 1 130004 1% 39% 125 Search LINE+1 Search LINE+1
9 NON LTR RETROTRANSPOSON 129611 1% 69% 70 Search NON+LTR+RETROTRANSPOSON Search NON+LTR+RETROTRANSPOSON
10 RETROTRANSPOSITION 106860 1% 46% 87 Search RETROTRANSPOSITION Search RETROTRANSPOSITION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.

Classes with closest relation at Level 2


rank cluster_id2 link
1 1743 CROWN GALL//TRANSPOSABLE ELEMENTS//T DNA
2 1836 CHROMOSOME TERRITORY//CHIP SEQ//NUCLEAR ARCHITECTURE
3 1473 SPOTTED WING DROSOPHILA//DROSOPHILA SUBOBSCURA//EVOLUTION
4 755 B CHROMOSOMES//CHROMOSOMA//MEIOSIS
5 991 EZH2//POLYCOMB//HISTONE DEMETHYLASE
6 1914 MARINER//SLEEPING BEAUTY//TRANSGENE
7 273 DROSOPHILA//DEVELOPMENTAL BIOLOGY//DEVELOPMENT
8 1646 ENDOGENOUS RETROVIRUS//HUMAN ENDOGENOUS RETROVIRUS//VIROLOGY
9 3475 ASPARAGUS OFFICINALIS//ASPARAGUS//ASPARAGUS OFFICINALIS L
10 3113 NUCLEAR MATRIX//SATB1//MATRIX ATTACHMENT REGION

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