Class information for:
Level 1: YEAST VACUOLE//ARC SYNDROME//VPS33B

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
12594 894 48.4 79%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
269 3       CELL BIOLOGY//CAVEOLIN 1//CAVEOLAE 44007
447 2             TRAFFIC//ENDOCYTOSIS//CLATHRIN 16170
12594 1                   YEAST VACUOLE//ARC SYNDROME//VPS33B 894

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 YEAST VACUOLE authKW 282034 2% 52% 16
2 ARC SYNDROME authKW 276649 1% 90% 9
3 VPS33B authKW 209194 1% 88% 7
4 VACUOLE authKW 201874 9% 7% 80
5 CORVET authKW 185949 1% 78% 7
6 VPS41 authKW 182151 1% 67% 8
7 VACUOLAR PROTEIN SORTING authKW 178459 2% 29% 18
8 HOPS COMPLEX authKW 136614 1% 67% 6
9 YPT7P authKW 136614 1% 67% 6
10 VACUOLE FUSION authKW 128573 1% 47% 8

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 7894 48% 0% 428
2 Biochemistry & Molecular Biology 2397 44% 0% 393
3 Mycology 1136 5% 0% 42
4 Microbiology 405 10% 0% 91
5 Biotechnology & Applied Microbiology 244 8% 0% 75
6 Genetics & Heredity 187 7% 0% 66
7 Biophysics 139 6% 0% 50
8 Biochemical Research Methods 50 3% 0% 31
9 Developmental Biology 31 2% 0% 14
10 Biology 15 2% 0% 17

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MED CELLULAR MOLEC MED 121977 1% 71% 5
2 PROTOGENIA 68309 0% 100% 2
3 1MSS 34154 0% 100% 1
4 AERA 9 34154 0% 100% 1
5 BACH BIOTECHNOL 34154 0% 100% 1
6 BIO AMSTERDAM MOL CELL BIOL 34154 0% 100% 1
7 BIO BIOL MOL 34154 0% 100% 1
8 BIO MOL CELL BIOL 34154 0% 100% 1
9 BIOCENTRUM MOL CELL BIOL SECT MOL CYTOL 34154 0% 100% 1
10 BIOCHEM GEORGE SQ 34154 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR BIOLOGY OF THE CELL 27581 9% 1% 82
2 JOURNAL OF CELL BIOLOGY 12678 9% 0% 77
3 TRAFFIC 7816 2% 1% 21
4 YEAST 5798 2% 1% 22
5 EMBO JOURNAL 2264 4% 0% 34
6 JOURNAL OF CELL SCIENCE 1351 3% 0% 23
7 JOURNAL OF BIOLOGICAL CHEMISTRY 1044 8% 0% 71
8 EUROPEAN JOURNAL OF CELL BIOLOGY 1026 1% 0% 11
9 EXPERIMENTAL MYCOLOGY 830 0% 1% 4
10 GENETICS 658 2% 0% 16

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 YEAST VACUOLE 282034 2% 52% 16 Search YEAST+VACUOLE Search YEAST+VACUOLE
2 ARC SYNDROME 276649 1% 90% 9 Search ARC+SYNDROME Search ARC+SYNDROME
3 VPS33B 209194 1% 88% 7 Search VPS33B Search VPS33B
4 VACUOLE 201874 9% 7% 80 Search VACUOLE Search VACUOLE
5 CORVET 185949 1% 78% 7 Search CORVET Search CORVET
6 VPS41 182151 1% 67% 8 Search VPS41 Search VPS41
7 VACUOLAR PROTEIN SORTING 178459 2% 29% 18 Search VACUOLAR+PROTEIN+SORTING Search VACUOLAR+PROTEIN+SORTING
8 HOPS COMPLEX 136614 1% 67% 6 Search HOPS+COMPLEX Search HOPS+COMPLEX
9 YPT7P 136614 1% 67% 6 Search YPT7P Search YPT7P
10 VACUOLE FUSION 128573 1% 47% 8 Search VACUOLE+FUSION Search VACUOLE+FUSION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 BALDERHAAR, HJK , UNGERMANN, C , (2013) CORVET AND HOPS TETHERING COMPLEXES - COORDINATORS OF ENDOSOME AND LYSOSOME FUSION.JOURNAL OF CELL SCIENCE. VOL. 126. ISSUE 6. P. 1307-1316 80 60% 72
2 WICKNER, W , (2010) MEMBRANE FUSION: FIVE LIPIDS, FOUR SNARES, THREE CHAPERONES, TWO NUCLEOTIDES, AND A RAB, ALL DANCING IN A RING ON YEAST VACUOLES.ANNUAL REVIEW OF CELL AND DEVELOPMENTAL BIOLOGY, VOL 26. VOL. 26. ISSUE . P. 115-136 61 62% 113
3 OSTROWICZ, CW , MEIRINGER, CTA , UNGERMANN, C , (2008) YEAST VACUOLE FUSION - A MODEL SYSTEM FOR EUKARYOTIC ENDOMEMBRANE DYNAMICS.AUTOPHAGY. VOL. 4. ISSUE 1. P. 5 -19 95 46% 56
4 VANDENHAZEL, HB , KIELLANDBRANDT, MC , WINTHER, JR , (1996) BIOSYNTHESIS AND FUNCTION OF YEAST VACUOLAR PROTEASES - REVIEW.YEAST. VOL. 12. ISSUE 1. P. 1-16 71 75% 113
5 ZHOU, YY , ZHANG, JF , (2014) ARTHROGRYPOSIS-RENAL DYSFUNCTION-CHOLESTASIS (ARC) SYNDROME: FROM MOLECULAR GENETICS TO CLINICAL FEATURES.ITALIAN JOURNAL OF PEDIATRICS. VOL. 40. ISSUE . P. - 30 100% 2
6 CONIBEAR, E , STEVENS, TH , (1998) MULTIPLE SORTING PATHWAYS BETWEEN THE LATE GOLGI AND THE VACUOLE IN YEAST.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1404. ISSUE 1-2. P. 211 -230 72 55% 123
7 EPP, N , RETHMEIER, R , KRAMER, L , UNGERMANN, C , (2011) MEMBRANE DYNAMICS AND FUSION AT LATE ENDOSOMES AND VACUOLES - RAB REGULATION, MULTISUBUNIT TETHERING COMPLEXES AND SNARES.EUROPEAN JOURNAL OF CELL BIOLOGY. VOL. 90. ISSUE 9. P. 779-785 42 68% 31
8 RAYMOND, CK , HOWALDSTEVENSON, I , VATER, CA , STEVENS, TH , (1992) MORPHOLOGICAL CLASSIFICATION OF THE YEAST VACUOLAR PROTEIN SORTING MUTANTS - EVIDENCE FOR A PREVACUOLAR COMPARTMENT IN CLASS-E VPS MUTANTS.MOLECULAR BIOLOGY OF THE CELL. VOL. 3. ISSUE 12. P. 1389 -1402 38 81% 568
9 GALMES, R , TEN BRINK, C , OORSCHOT, V , VEENENDAAL, T , JONKER, C , VAN DER SLUIJS, P , KLUMPERMAN, J , (2015) VPS33B IS REQUIRED FOR DELIVERY OF ENDOCYTOSED CARGO TO LYSOSOMES.TRAFFIC. VOL. 16. ISSUE 12. P. 1288 -1305 39 61% 5
10 ORR, A , WICKNER, W , RUSIN, SF , KETTENBACH, AN , ZICK, M , (2015) YEAST VACUOLAR HOPS, REGULATED BY ITS KINASE, EXPLOITS AFFINITIES FOR ACIDIC LIPIDS AND RAB: GTP FOR MEMBRANE BINDING AND TO CATALYZE TETHERING AND FUSION.MOLECULAR BIOLOGY OF THE CELL. VOL. 26. ISSUE 2. P. 305 -315 34 69% 4

Classes with closest relation at Level 1


Rank Class id link
1 17837 RETROMER//SORTING NEXIN//VPS35
2 813 SNARE//SYNTAXIN//SYNAPTOTAGMIN
3 32533 KERATIN LIGAND//AGGLUTININ LECTINS//ALTERNARIA HUMICOLA
4 33881 TRAPP//SEDLIN//SEDL
5 6889 ESCRT//TSG101//ALG 2
6 25142 TOFUYO//CARLSBERG RESEARCH COMMUNICATIONS//SERINE CARBOXYPEPTIDASE
7 2031 RAB//RAB PROTEINS//RAB27A
8 20729 PHO85//P I TRANSPORTER//PHO84
9 911 COPII//GOLGI APPARATUS//GOLGI
10 4295 CLATHRIN//CLATHRIN COATED VESICLES//ADAPTIN

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