Class information for:
Level 1: RETROMER//SORTING NEXIN//VPS35

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
17837 580 50.7 95%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
269 3       CELL BIOLOGY//CAVEOLIN 1//CAVEOLAE 44007
447 2             TRAFFIC//ENDOCYTOSIS//CLATHRIN 16170
17837 1                   RETROMER//SORTING NEXIN//VPS35 580

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RETROMER authKW 3468043 16% 69% 95
2 SORTING NEXIN authKW 1453648 8% 59% 47
3 VPS35 authKW 1052900 5% 67% 30
4 HENRY WELLCOME INTEGRATED SIGNALLING S address 843917 4% 70% 23
5 RETROMER COMPLEX authKW 445935 2% 71% 12
6 VPS26 authKW 387663 2% 82% 9
7 WNTLESS authKW 385050 3% 46% 16
8 SORTING NEXIN 1 authKW 374370 1% 89% 8
9 PX DOMAIN authKW 370151 3% 47% 15
10 WASH COMPLEX authKW 368522 1% 100% 7

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 8066 59% 0% 345
2 Biochemistry & Molecular Biology 958 36% 0% 207
3 Developmental Biology 795 8% 0% 45
4 Neurosciences 132 11% 0% 65
5 Biophysics 109 6% 0% 35
6 Geriatrics & Gerontology 53 2% 0% 11
7 Genetics & Heredity 23 4% 0% 24
8 Anatomy & Morphology 14 1% 0% 5
9 Clinical Neurology 12 4% 0% 21
10 Microscopy 3 0% 0% 2

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 HENRY WELLCOME INTEGRATED SIGNALLING S 843917 4% 70% 23
2 HENRY WELLCOME INTEGRATED SIGNALING S 236904 1% 75% 6
3 CELLULAR ORTHOPAED 105292 0% 100% 2
4 UMR144 CURIE 70193 0% 67% 2
5 PHARMACEUT CELL BIOL 57314 1% 16% 7
6 BIO NANOTECHNOL NANOMED 52646 0% 100% 1
7 BIOCHEM UNIV HLTH SYST 52646 0% 100% 1
8 BIOCHEMHENRY WELLCOME INTEGRATED SIGNALLING 52646 0% 100% 1
9 BIOL DURHAM 52646 0% 100% 1
10 BIOMED IMAGE IL BMIF 52646 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TRAFFIC 39582 7% 2% 38
2 MOLECULAR BIOLOGY OF THE CELL 5664 5% 0% 30
3 JOURNAL OF CELL SCIENCE 5200 6% 0% 36
4 NATURE CELL BIOLOGY 4986 3% 1% 16
5 DEVELOPMENTAL CELL 2931 2% 0% 12
6 JOURNAL OF CELL BIOLOGY 1571 4% 0% 22
7 MOLECULAR BRAIN 900 1% 1% 3
8 NEUROBIOLOGY OF AGING 899 2% 0% 10
9 MOLECULAR NEURODEGENERATION 843 1% 1% 3
10 NATURE REVIEWS MOLECULAR CELL BIOLOGY 683 1% 0% 4

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 RETROMER 3468043 16% 69% 95 Search RETROMER Search RETROMER
2 SORTING NEXIN 1453648 8% 59% 47 Search SORTING+NEXIN Search SORTING+NEXIN
3 VPS35 1052900 5% 67% 30 Search VPS35 Search VPS35
4 RETROMER COMPLEX 445935 2% 71% 12 Search RETROMER+COMPLEX Search RETROMER+COMPLEX
5 VPS26 387663 2% 82% 9 Search VPS26 Search VPS26
6 WNTLESS 385050 3% 46% 16 Search WNTLESS Search WNTLESS
7 SORTING NEXIN 1 374370 1% 89% 8 Search SORTING+NEXIN+1 Search SORTING+NEXIN+1
8 PX DOMAIN 370151 3% 47% 15 Search PX+DOMAIN Search PX+DOMAIN
9 WASH COMPLEX 368522 1% 100% 7 Search WASH+COMPLEX Search WASH+COMPLEX
10 WNT SECRETION 355356 2% 75% 9 Search WNT+SECRETION Search WNT+SECRETION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 GALLON, M , CULLEN, PJ , (2015) RETROMER AND SORTING NEXINS IN ENDOSOMAL SORTING.BIOCHEMICAL SOCIETY TRANSACTIONS. VOL. 43. ISSUE . P. 33 -47 101 65% 23
2 LIU, JJ , (2016) RETROMER-MEDIATED PROTEIN SORTING AND VESICULAR TRAFFICKING.JOURNAL OF GENETICS AND GENOMICS. VOL. 43. ISSUE 4. P. 165 -177 97 72% 0
3 SEAMAN, MNJ , (2012) THE RETROMER COMPLEX - ENDOSOMAL PROTEIN RECYCLING AND BEYOND.JOURNAL OF CELL SCIENCE. VOL. 125. ISSUE 20. P. 4693 -4702 74 67% 123
4 CULLEN, PJ , KORSWAGEN, HC , (2012) SORTING NEXINS PROVIDE DIVERSITY FOR RETROMER-DEPENDENT TRAFFICKING EVENTS.NATURE CELL BIOLOGY. VOL. 14. ISSUE 1. P. 29 -37 76 67% 101
5 BURD, C , CULLEN, PJ , (2014) RETROMER: A MASTER CONDUCTOR OF ENDOSOME SORTING.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 6. ISSUE 2. P. - 74 64% 15
6 LI, CS , SHAH, SZA , ZHAO, DM , YANG, LF , (2016) ROLE OF THE RETROMER COMPLEX IN NEURODEGENERATIVE DISEASES.FRONTIERS IN AGING NEUROSCIENCE. VOL. 8. ISSUE . P. - 72 62% 1
7 CHI, RJ , HARRISON, MS , BURD, CG , (2015) BIOGENESIS OF ENDOSOME-DERIVED TRANSPORT CARRIERS.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 72. ISSUE 18. P. 3441 -3455 79 55% 7
8 DAMSEH, N , DANSON, CM , AL-ASHHAB, M , ABU-LIBDEH, B , GALLON, M , SHARMA, K , YAACOV, B , COULTHARD, E , CALDWELL, MA , EDVARDSON, S , ET AL (2015) A DEFECT IN THE RETROMER ACCESSORY PROTEIN, SNX27, MANIFESTS BY INFANTILE MYOCLONIC EPILEPSY AND NEURODEGENERATION.NEUROGENETICS. VOL. 16. ISSUE 3. P. 215 -221 50 89% 5
9 VERGES, M , (2016) RETROMER IN POLARIZED PROTEIN TRANSPORT.INTERNATIONAL REVIEW OF CELL AND MOLECULAR BIOLOGY, VOL 323. VOL. 323. ISSUE . P. 129 -179 106 45% 0
10 FREEMAN, CL , HESKETH, G , SEAMAN, MNJ , (2014) RME-8 COORDINATES THE ACTIVITY OF THE WASH COMPLEX WITH THE FUNCTION OF THE RETROMER SNX DIMER TO CONTROL ENDOSOMAL TUBULATION.JOURNAL OF CELL SCIENCE. VOL. 127. ISSUE 9. P. 2053 -2070 55 71% 23

Classes with closest relation at Level 1


Rank Class id link
1 12594 YEAST VACUOLE//ARC SYNDROME//VPS33B
2 7540 PHOSPHOINOSITIDE//PIKFYVE//SECT MOL SIGNAL TRANSDUCT
3 36689 GOLPH3//GOLGI PHOSPHOPROTEIN 3//GOLGI PHOSPHOPROTEIN 3 GOLPH3
4 25423 EPS8//EHD1//INTERSECTIN 1
5 22503 AICARDI SYNDROME//FOCAL DERMAL HYPOPLASIA//GOLTZ SYNDROME
6 6773 LRRK2//LEUCINE RICH REPEAT KINASE 2//LEUCINE RICH REPEAT KINASE 2 LRRK2
7 8624 DYNAMIN//BAR DOMAIN//AMPHIPHYSIN
8 11336 SORL1//TOMM40//PICALM
9 4295 CLATHRIN//CLATHRIN COATED VESICLES//ADAPTIN
10 6889 ESCRT//TSG101//ALG 2

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