Class information for:
Level 1: METAPROTEOMICS//PROTEIN SIP//SOIL METAPROTEOMICS

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
24827 300 49.5 85%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
4 4 ENVIRONMENTAL SCIENCES//GEOSCIENCES, MULTIDISCIPLINARY//METEOROLOGY & ATMOSPHERIC SCIENCES 1766162
50 3       ANAEROBIC DIGESTION//MICROBIAL FUEL CELL//WATER SCIENCE AND TECHNOLOGY 91931
1312 2             MICROBIOLOGY//PLANCTOMYCETES//PROPIDIUM MONOAZIDE 8512
24827 1                   METAPROTEOMICS//PROTEIN SIP//SOIL METAPROTEOMICS 300

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 METAPROTEOMICS authKW 776275 10% 25% 30
2 PROTEIN SIP authKW 723796 3% 89% 8
3 SOIL METAPROTEOMICS authKW 523459 2% 86% 6
4 COMMUNITY PROTEOMICS authKW 508920 2% 100% 5
5 FUNCTIONAL METAPROTEOMICS authKW 407136 1% 100% 4
6 SOIL PROTEIN EXTRACTION authKW 407136 1% 100% 4
7 STABLE ISOTOPE PROBING authKW 405149 8% 16% 25
8 CHEM DIRECTORATE address 325707 1% 80% 4
9 ISOTOPE ARRAY authKW 305352 1% 100% 3
10 SOIL PROTEOMICS authKW 271422 1% 67% 4

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Microbiology 3987 48% 0% 144
2 Biochemical Research Methods 1592 25% 0% 74
3 Biotechnology & Applied Microbiology 749 22% 0% 66
4 Soil Science 504 8% 0% 24
5 Ecology 349 13% 0% 39
6 Chemistry, Analytical 19 5% 0% 15
7 Marine & Freshwater Biology 17 3% 0% 9
8 Biochemistry & Molecular Biology 14 11% 0% 32
9 Environmental Sciences 7 4% 0% 13
10 Limnology 6 1% 0% 2

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CHEM DIRECTORATE 325707 1% 80% 4
2 DEVM ECOL MICROBIENNE RHIZOSPHERE ENVIRONM 203568 1% 100% 2
3 ISOTOPE BIOGEOCHEM 124521 6% 6% 19
4 AGROINNOVA COMPETENCE INNOVAT AGROENVIRONM FI 101784 0% 100% 1
5 AQUAT ECOL EAWAG 101784 0% 100% 1
6 BIO ERSITY ECOSYST FUNCT GRP 101784 0% 100% 1
7 BIOTECHNOL WASTEWATER TREATMENT 101784 0% 100% 1
8 CADARACHECNRS 101784 0% 100% 1
9 CEACNRSPMSE 101784 0% 100% 1
10 COMP PLICAT ENERGY ENVIRONM BIOL 101784 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ISME JOURNAL 16737 6% 1% 17
2 ENVIRONMENTAL MICROBIOLOGY 8638 6% 0% 18
3 CURRENT OPINION IN BIOTECHNOLOGY 6316 4% 1% 12
4 PROTEOMICS 5127 6% 0% 17
5 APPLIED AND ENVIRONMENTAL MICROBIOLOGY 2466 9% 0% 27
6 FEMS MICROBIOLOGY ECOLOGY 1975 3% 0% 9
7 MICROBIOME 1972 1% 1% 2
8 MICROBIAL ECOLOGY 1966 3% 0% 8
9 JOURNAL OF PROTEOME RESEARCH 1656 3% 0% 10
10 ENVIRONMENTAL MICROBIOLOGY REPORTS 1215 1% 0% 3

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 METAPROTEOMICS 776275 10% 25% 30 Search METAPROTEOMICS Search METAPROTEOMICS
2 PROTEIN SIP 723796 3% 89% 8 Search PROTEIN+SIP Search PROTEIN+SIP
3 SOIL METAPROTEOMICS 523459 2% 86% 6 Search SOIL+METAPROTEOMICS Search SOIL+METAPROTEOMICS
4 COMMUNITY PROTEOMICS 508920 2% 100% 5 Search COMMUNITY+PROTEOMICS Search COMMUNITY+PROTEOMICS
5 FUNCTIONAL METAPROTEOMICS 407136 1% 100% 4 Search FUNCTIONAL+METAPROTEOMICS Search FUNCTIONAL+METAPROTEOMICS
6 SOIL PROTEIN EXTRACTION 407136 1% 100% 4 Search SOIL+PROTEIN+EXTRACTION Search SOIL+PROTEIN+EXTRACTION
7 STABLE ISOTOPE PROBING 405149 8% 16% 25 Search STABLE+ISOTOPE+PROBING Search STABLE+ISOTOPE+PROBING
8 ISOTOPE ARRAY 305352 1% 100% 3 Search ISOTOPE+ARRAY Search ISOTOPE+ARRAY
9 SOIL PROTEOMICS 271422 1% 67% 4 Search SOIL+PROTEOMICS Search SOIL+PROTEOMICS
10 ENVIRONMENTAL PROTEOMICS 224615 3% 28% 8 Search ENVIRONMENTAL+PROTEOMICS Search ENVIRONMENTAL+PROTEOMICS

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref.
in cl.		 Shr. of ref. in
cl.		 Citations
1 VON BERGEN, M , JEHMLICH, N , TAUBERT, M , VOGT, C , BASTIDA, F , HERBST, FA , SCHMIDT, F , RICHNOW, HH , SEIFERT, J , (2013) INSIGHTS FROM QUANTITATIVE METAPROTEOMICS AND PROTEIN-STABLE ISOTOPE PROBING INTO MICROBIAL ECOLOGY.ISME JOURNAL. VOL. 7. ISSUE 10. P. 1877-1885 28 51% 23
2 HETTICH, RL , PAN, CL , CHOUREY, K , GIANNONE, RJ , (2013) METAPROTEOMICS: HARNESSING THE POWER OF HIGH PERFORMANCE MASS SPECTROMETRY TO IDENTIFY THE SUITE OF PROTEINS THAT CONTROL METABOLIC ACTIVITIES IN MICROBIAL COMMUNITIES.ANALYTICAL CHEMISTRY. VOL. 85. ISSUE 9. P. 4203 -4214 32 36% 37
3 HETTICH, RL , SHARMA, R , CHOUREY, K , GIANNONE, RJ , (2012) MICROBIAL METAPROTEOMICS: IDENTIFYING THE REPERTOIRE OF PROTEINS THAT MICROORGANISMS USE TO COMPETE AND COOPERATE IN COMPLEX ENVIRONMENTAL COMMUNITIES.CURRENT OPINION IN MICROBIOLOGY. VOL. 15. ISSUE 3. P. 373-380 27 45% 27
4 JUSTICE, NB , LI, Z , WANG, YF , SPAUDLING, SE , MOSIER, AC , HETTICH, RL , PAN, CL , BANFIELD, JF , (2014) N-15- AND H-2 PROTEOMIC STABLE ISOTOPE PROBING LINKS NITROGEN FLOW TO ARCHAEAL HETEROTROPHIC ACTIVITY.ENVIRONMENTAL MICROBIOLOGY. VOL. 16. ISSUE 10. P. 3224 -3237 21 55% 6
5 UHLIK, O , LEEWIS, MC , STREJCEK, M , MUSILOVA, L , MACKOVA, M , LEIGH, MB , MACEK, T , (2013) STABLE ISOTOPE PROBING IN THE METAGENOMICS ERA: A BRIDGE TOWARDS IMPROVED BIOREMEDIATION.BIOTECHNOLOGY ADVANCES. VOL. 31. ISSUE 2. P. 154-165 40 26% 23
6 SIGGINS, A , GUNNIGLE, E , ABRAM, F , (2012) EXPLORING MIXED MICROBIAL COMMUNITY FUNCTIONING: RECENT ADVANCES IN METAPROTEOMICS.FEMS MICROBIOLOGY ECOLOGY. VOL. 80. ISSUE 2. P. 265-280 29 36% 36
7 ARSENE-PLOETZE, F , BERTIN, PN , CARAPITO, C , (2015) PROTEOMIC TOOLS TO DECIPHER MICROBIAL COMMUNITY STRUCTURE AND FUNCTIONING.ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH. VOL. 22. ISSUE 18. P. 13599 -13612 33 31% 0
8 NEUFELD, JD , DUMONT, MG , VOHRA, J , MURRELL, JC , (2007) METHODOLOGICAL CONSIDERATIONS FOR THE USE OF STABLE ISOTOPE PROBING IN MICROBIAL ECOLOGY.MICROBIAL ECOLOGY. VOL. 53. ISSUE 3. P. 435-442 17 59% 82
9 NEUFELD, JD , VOHRA, J , DUMONT, MG , LUEDERS, T , MANEFIELD, M , FRIEDRICH, MW , MURRELL, JC , (2007) DNA STABLE-ISOTOPE PROBING.NATURE PROTOCOLS. VOL. 2. ISSUE 4. P. 860-866 11 85% 108
10 RENELLA, G , OGUNSEITAN, O , GIAGNONI, L , ARENELLA, M , (2014) ENVIRONMENTAL PROTEOMICS: A LONG MARCH IN THE PEDOSPHERE.SOIL BIOLOGY & BIOCHEMISTRY. VOL. 69. ISSUE . P. 34-37 17 53% 6

Classes with closest relation at Level 1


Rank Class id link
1 19594 METAGENOMIC LIBRARY//FUNCTIONAL METAGENOMICS//METAGENOME
2 5067 BENZYLSUCCINATE SYNTHASE//BTEX//ANAEROBIC AROMATIC METABOLISM
3 1128 PLFA//PHOSPHOLIPID FATTY ACIDS//BIOLOG
4 1803 METAGENOMICS//MICROBIOME//HUMAN MICROBIOME
5 1924 SAR11//BACTERIOPLANKTON//BACTERIOPLANKTON COMMUNITY
6 24737 POLYNUCLEOTIDE PROBES//ACTIVE FLUORESCENT STAINING//FISHFC
7 24226 T RFLP//TERMINAL RESTRICTION FRAGMENT LENGTH POLYMORPHISM//LENGTH HETEROGENEITY PCR LH PCR
8 3003 METHANOTROPHS//METHANE OXIDATION//PMOA
9 6230 SYNTROPHIC ACETATE OXIDATION//ANAEROBIC DIGESTION//INTERSPECIES HYDROGEN TRANSFER
10 1508 PEPTIDE IDENTIFICATION//JOURNAL OF PROTEOME RESEARCH//PROTEIN IDENTIFICATION

Go to start page