Class information for:
Level 1: TFIID//GENERAL TRANSCRIPTION FACTORS//TFIIA

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
2863 2128 48.6 92%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
2504 2             TFIID//RNA POLYMERASE II//MEDIATOR COMPLEX 3873
2863 1                   TFIID//GENERAL TRANSCRIPTION FACTORS//TFIIA 2128

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 TFIID authKW 874151 4% 68% 89
2 GENERAL TRANSCRIPTION FACTORS authKW 280692 1% 65% 30
3 TFIIA authKW 244822 1% 74% 23
4 TFIIB authKW 203779 1% 57% 25
5 TATA BINDING PROTEIN authKW 201096 2% 37% 38
6 RNA POLYMERASE II authKW 191047 5% 13% 106
7 TBP authKW 174707 4% 16% 76
8 TAFS authKW 149940 1% 58% 18
9 TAF authKW 147726 1% 47% 22
10 TFIIE authKW 133539 1% 85% 11

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 20838 79% 0% 1681
2 Cell Biology 17057 46% 0% 973
3 Developmental Biology 1995 6% 0% 138
4 Genetics & Heredity 1647 13% 0% 271
5 Biophysics 282 5% 0% 112
6 Biochemical Research Methods 129 4% 0% 76
7 Biology 62 2% 0% 48
8 Biotechnology & Applied Microbiology 8 2% 0% 52
9 Mycology 4 0% 0% 7
10 Plant Sciences 0 2% 0% 42

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 LI KA SHING BIOMED HLTH SCI 83597 1% 45% 13
2 ROGER ADAMS 430 45911 0% 80% 4
3 FYSIOL CHEM 43043 0% 100% 3
4 GENE FUNCT ANIM 36920 1% 23% 11
5 SECT NMR SPECT 32280 0% 75% 3
6 NUCL ACIDS ENZYMOL 30375 0% 35% 6
7 BIOCHEM MOLEC BIOL 1230 YORK AVE 28695 0% 100% 2
8 UPR 6520 28695 0% 100% 2
9 GENET BIOL MOL CELLULAIRE 27881 3% 4% 54
10 ADV MOL BIOL IMMUNOL 25823 0% 60% 3

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR AND CELLULAR BIOLOGY 38335 11% 1% 244
2 GENES & DEVELOPMENT 17302 4% 1% 95
3 CELL 9102 5% 1% 98
4 JOURNAL OF BIOLOGICAL CHEMISTRY 7994 14% 0% 295
5 NUCLEIC ACIDS RESEARCH 5791 6% 0% 128
6 MOLECULAR CELL 4145 2% 1% 40
7 EMBO JOURNAL 3343 3% 0% 64
8 PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 3312 7% 0% 152
9 COLD SPRING HARBOR SYMPOSIA ON QUANTITATIVE BIOLOGY 2819 1% 1% 21
10 CAHIERS DE LA REVUE DE THEOLOGIE ET DE PHILOSOPHIE 2282 3% 0% 65

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 TFIID 874151 4% 68% 89 Search TFIID Search TFIID
2 GENERAL TRANSCRIPTION FACTORS 280692 1% 65% 30 Search GENERAL+TRANSCRIPTION+FACTORS Search GENERAL+TRANSCRIPTION+FACTORS
3 TFIIA 244822 1% 74% 23 Search TFIIA Search TFIIA
4 TFIIB 203779 1% 57% 25 Search TFIIB Search TFIIB
5 TATA BINDING PROTEIN 201096 2% 37% 38 Search TATA+BINDING+PROTEIN Search TATA+BINDING+PROTEIN
6 RNA POLYMERASE II 191047 5% 13% 106 Search RNA+POLYMERASE+II Search RNA+POLYMERASE+II
7 TBP 174707 4% 16% 76 Search TBP Search TBP
8 TAFS 149940 1% 58% 18 Search TAFS Search TAFS
9 TAF 147726 1% 47% 22 Search TAF Search TAF
10 TFIIE 133539 1% 85% 11 Search TFIIE Search TFIIE

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 THOMAS, MC , CHIANG, CM , (2006) THE GENERAL TRANSCRIPTION MACHINERY AND GENERAL COFACTORS.CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. VOL. 41. ISSUE 3. P. 105-178 386 52% 367
2 SAINSBURY, S , BERNECKY, C , CRAMER, P , (2015) STRUCTURAL BASIS OF TRANSCRIPTION INITIATION BY RNA POLYMERASE II.NATURE REVIEWS MOLECULAR CELL BIOLOGY. VOL. 16. ISSUE 3. P. 129 -143 176 71% 33
3 HAMPSEY, M , (1998) MOLECULAR GENETICS OF THE RNA POLYMERASE II GENERAL TRANSCRIPTIONAL MACHINERY.MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS. VOL. 62. ISSUE 2. P. 465-+ 267 49% 379
4 ORPHANIDES, G , LAGRANGE, T , REINBERG, D , (1996) THE GENERAL TRANSCRIPTION FACTORS OF RNA POLYMERASE II.GENES & DEVELOPMENT. VOL. 10. ISSUE 21. P. 2657-2683 171 65% 729
5 SMALE, ST , KADONAGA, JT , (2003) THE RNA POLYMERASE II CORE PROMOTER.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 72. ISSUE . P. 449-479 143 65% 565
6 CONAWAY, RC , CONAWAY, JW , (1993) GENERAL INITIATION-FACTORS FOR RNA POLYMERASE-II.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 62. ISSUE . P. 161-190 172 70% 341
7 PUGH, BF , (2000) CONTROL OF GENE EXPRESSION THROUGH REGULATION OF THE TATA-BINDING PROTEIN.GENE. VOL. 255. ISSUE 1. P. 1 -14 130 83% 126
8 ALBRIGHT, SR , TJIAN, R , (2000) TAFS REVISITED: MORE DATA REVEAL NEW TWISTS AND CONFIRM OLD IDEAS.GENE. VOL. 242. ISSUE 1-2. P. 1-13 108 84% 220
9 BURLEY, SK , ROEDER, RG , (1996) BIOCHEMISTRY AND STRUCTURAL BIOLOGY OF TRANSCRIPTION FACTOR IID (TFIID).ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 65. ISSUE . P. 769-799 107 73% 503
10 AKHTAR, W , VEENSTRA, GJC , (2011) TBP-RELATED FACTORS: A PARADIGM OF DIVERSITY IN TRANSCRIPTION INITIATION.CELL AND BIOSCIENCE. VOL. 1. ISSUE . P. - 84 91% 15

Classes with closest relation at Level 1


Rank Class id link
1 13537 MEDIATOR COMPLEX//CDK8//MED12
2 17211 RPB4//RPB7//INTERSPECIFIC COMPLEMENTATION
3 28565 USF1//UPSTREAM TRANSCRIPTION FACTOR 1//USF
4 5889 P TEFB//CDK9//RNA POLYMERASE II
5 5781 RNA POLYMERASE III//TFIIIB//RNA POLYMERASE III TRANSCRIPTION
6 8607 HISTONE ACETYLTRANSFERASE//GCN5//MOZ
7 37211 EDF 1//MBF1//MULTIPROTEIN BRIDGING FACTOR 1 MBF1
8 11310 GAL80//GAL4P//GAL4
9 36309 DREF//INSECT BIOMED//DNA REPLICATION RELATED GENE
10 3302 RNA POLYMERASE//TRANSCRIPTION TERMINATION//NUSG

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