Class information for:
Level 1: IRES//INTERNAL RIBOSOME ENTRY SITE//INTERNAL RIBOSOME ENTRY SITE IRES

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
5844 1568 49.9 90%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
1632 2             EIF4E//TRANSLATION INITIATION//IRES 6984
5844 1                   IRES//INTERNAL RIBOSOME ENTRY SITE//INTERNAL RIBOSOME ENTRY SITE IRES 1568

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 IRES authKW 1932755 13% 51% 196
2 INTERNAL RIBOSOME ENTRY SITE authKW 486739 4% 42% 60
3 INTERNAL RIBOSOME ENTRY SITE IRES authKW 341149 2% 60% 29
4 INTERNAL INITIATION authKW 241638 1% 56% 22
5 TRANSLATION INITIATION authKW 233102 6% 13% 93
6 INTERNAL RIBOSOME ENTRY authKW 219057 1% 75% 15
7 HCV IRES authKW 200866 1% 74% 14
8 IRES ELEMENTS authKW 200284 1% 86% 12
9 INTERNAL INITIATION OF TRANSLATION authKW 168292 1% 79% 11
10 CAP INDEPENDENT TRANSLATION authKW 127661 1% 33% 20

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Virology 27025 32% 0% 496
2 Biochemistry & Molecular Biology 6343 53% 0% 827
3 Cell Biology 1868 19% 0% 299
4 Biotechnology & Applied Microbiology 312 7% 0% 116
5 Biophysics 275 6% 0% 92
6 Genetics & Heredity 217 6% 0% 99
7 Biochemical Research Methods 34 3% 0% 40
8 Gastroenterology & Hepatology 30 2% 0% 34
9 Developmental Biology 22 1% 0% 18
10 Microbiology 12 3% 0% 43

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UNITE REGULAT TRADUCT EUCARYOTE VIRALE 124620 1% 80% 8
2 CNRS URA 1966 69541 0% 71% 5
3 MILENIO INMUNOL INMUNOTER IA MED 58417 0% 100% 3
4 FED RECH LOUIS BUGNARD 51924 0% 67% 4
5 FEDERAT RECH LOUIS BUGNARD 51924 0% 67% 4
6 U397 41415 1% 21% 10
7 HIV TRAFFICKING 1 38945 0% 100% 2
8 INSERMU589 38945 0% 100% 2
9 MED INTERNA HEPATOL 38945 0% 100% 2
10 MILENIO INMUNOL INMUNOTER IA VIROL MO 38945 0% 100% 2

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA-A PUBLICATION OF THE RNA SOCIETY 22049 2% 3% 38
2 JOURNAL OF VIROLOGY 19950 13% 1% 202
3 RNA 19911 3% 2% 51
4 NUCLEIC ACIDS RESEARCH 9125 9% 0% 137
5 VIROLOGY 5805 5% 0% 75
6 JOURNAL OF GENERAL VIROLOGY 4826 4% 0% 58
7 VIRUS RESEARCH 3972 2% 1% 33
8 RNA BIOLOGY 3034 1% 1% 12
9 JOURNAL OF HUMAN VIROLOGY 1820 0% 3% 3
10 MOLECULAR AND CELLULAR BIOLOGY 1782 3% 0% 46

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 IRES 1932755 13% 51% 196 Search IRES Search IRES
2 INTERNAL RIBOSOME ENTRY SITE 486739 4% 42% 60 Search INTERNAL+RIBOSOME+ENTRY+SITE Search INTERNAL+RIBOSOME+ENTRY+SITE
3 INTERNAL RIBOSOME ENTRY SITE IRES 341149 2% 60% 29 Search INTERNAL+RIBOSOME+ENTRY+SITE+IRES Search INTERNAL+RIBOSOME+ENTRY+SITE+IRES
4 INTERNAL INITIATION 241638 1% 56% 22 Search INTERNAL+INITIATION Search INTERNAL+INITIATION
5 TRANSLATION INITIATION 233102 6% 13% 93 Search TRANSLATION+INITIATION Search TRANSLATION+INITIATION
6 INTERNAL RIBOSOME ENTRY 219057 1% 75% 15 Search INTERNAL+RIBOSOME+ENTRY Search INTERNAL+RIBOSOME+ENTRY
7 HCV IRES 200866 1% 74% 14 Search HCV+IRES Search HCV+IRES
8 IRES ELEMENTS 200284 1% 86% 12 Search IRES+ELEMENTS Search IRES+ELEMENTS
9 INTERNAL INITIATION OF TRANSLATION 168292 1% 79% 11 Search INTERNAL+INITIATION+OF+TRANSLATION Search INTERNAL+INITIATION+OF+TRANSLATION
10 CAP INDEPENDENT TRANSLATION 127661 1% 33% 20 Search CAP+INDEPENDENT+TRANSLATION Search CAP+INDEPENDENT+TRANSLATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 BAIRD, SD , TURCOTTE, M , KORNELUK, RG , HOLCIK, M , (2006) SEARCHING FOR IRES.RNA-A PUBLICATION OF THE RNA SOCIETY. VOL. 12. ISSUE 10. P. 1755-1785 182 58% 172
2 HELLEN, CUT , SARNOW, P , (2001) INTERNAL RIBOSOME ENTRY SITES IN EUKARYOTIC MRNA MOLECULES.GENES & DEVELOPMENT. VOL. 15. ISSUE 13. P. 1593-1612 121 71% 617
3 BALVAY, L , RIFO, RS , RICCI, EP , DECIMO, D , OHLMANN, T , (2009) STRUCTURAL AND FUNCTIONAL DIVERSITY OF VIRAL IRESES.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1789. ISSUE 9-10. P. 542 -557 141 63% 76
4 MARTINEZ-SALAS, E , PINEIRO, D , FERNANDEZ, N , (2012) ALTERNATIVE MECHANISMS TO INITIATE TRANSLATION IN EUKARYOTIC MRNAS.COMPARATIVE AND FUNCTIONAL GENOMICS. VOL. . ISSUE . P. - 117 79% 11
5 FITZGERALD, KD , SEMLER, BL , (2009) BRIDGING IRES ELEMENTS IN MRNAS TO THE EUKARYOTIC TRANSLATION APPARATUS.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1789. ISSUE 9-10. P. 518 -528 104 78% 89
6 MARTINEZ-SALAS, E , PACHECO, A , SERRANO, P , FERNANDEZ, N , (2008) NEW INSIGHTS INTO INTERNAL RIBOSOME ENTRY SITE ELEMENTS RELEVANT FOR VIRAL GENE EXPRESSION.JOURNAL OF GENERAL VIROLOGY. VOL. 89. ISSUE . P. 611-626 128 65% 69
7 JOHNSON, AG , GROSELY, R , PETROV, AN , PUGLISI, JD , (2017) DYNAMICS OF IRES-MEDIATED TRANSLATION.PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. VOL. 372. ISSUE 1716. P. - 81 58% 1
8 MARTINEZ-SALAS, E , FERNANDEZ-MIRAGALL, O , REIGADAS, S , PACHECO, A , SERRANO, P , (2004) INTERNAL RIBOSOME ENTRY SITE ELEMENTS IN EUKARYOTIC GENOMES.CURRENT GENOMICS. VOL. 5. ISSUE 3. P. 259-277 159 65% 3
9 MARTINEZ-SALAS, E , FRANCISCO-VELILLA, R , FERNANDEZ-CHAMORRO, J , LOZANO, G , DIAZ-TOLEDANO, R , (2015) PICORNAVIRUS IRES ELEMENTS: RNA STRUCTURE AND HOST PROTEIN INTERACTIONS.VIRUS RESEARCH. VOL. 206. ISSUE . P. 62 -73 111 62% 6
10 SOUII, A , BEN M'HADHEB-GHARBI, M , GHARBI, J , (2013) ROLE OF RNA STRUCTURE MOTIFS IN IRES-DEPENDENT TRANSLATION INITIATION OF THE COXSACKIEVIRUS B3: NEW INSIGHTS FOR DEVELOPING LIVE-ATTENUATED STRAINS FOR VACCINES AND GENE THERAPY.MOLECULAR BIOTECHNOLOGY. VOL. 55. ISSUE 2. P. 179-202 129 61% 1

Classes with closest relation at Level 1


Rank Class id link
1 6388 PICORNAVIRUS//POLIOVIRUS//3C PROTEASE
2 14173 RIBOSOME PROFILING//UORF//UPSTREAM OPEN READING FRAME
3 3885 EIF4E//EIF4F//CAP ANALOG
4 30077 2A PEPTIDE//FMDV 2A//2A
5 6259 GENE REGULAT DEV//EIF3//EIF2
6 20621 HNRNP K//VIGILIN//HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN K
7 36779 CDK11P58//PITSLRE//CDK11
8 835 HEPATITIS C VIRUS//STUDY HEPATITIS C//VIROL 2
9 25054 PORCINE TESCHOVIRUS//SWINE VESICULAR DISEASE VIRUS//SENECA VALLEY VIRUS
10 11392 INTERFERON SENSITIVITY DETERMINING REGION//ISDR//CORE PROTEIN

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