Class information for:
Level 1: P BODIES//STRESS GRANULES//DECAPPING

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
6198 1515 53.0 94%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
153 3       BIOCHEMISTRY & MOLECULAR BIOLOGY//RIBOSOME//RNA 62593
156 2             NUCLEAR PORE COMPLEX//PRE MRNA SPLICING//SPLICEOSOME 22915
6198 1                   P BODIES//STRESS GRANULES//DECAPPING 1515

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 P BODIES authKW 1069301 6% 57% 93
2 STRESS GRANULES authKW 863424 7% 38% 113
3 DECAPPING authKW 835107 4% 75% 55
4 DEADENYLATION authKW 619703 4% 50% 62
5 MRNA DECAY authKW 618990 6% 32% 96
6 CCR4 NOT authKW 424101 1% 96% 22
7 DEADENYLASE authKW 400690 2% 76% 26
8 PROCESSING BODIES authKW 347692 2% 51% 34
9 CCR4 NOT COMPLEX authKW 287898 1% 71% 20
10 GW182 authKW 286689 1% 68% 21

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 Cell Biology 11141 44% 0% 665
2 Biochemistry & Molecular Biology 9196 63% 0% 960
3 Virology 672 6% 0% 84
4 Genetics & Heredity 611 10% 0% 146
5 Biophysics 468 7% 0% 112
6 Developmental Biology 171 3% 0% 38
7 Biochemical Research Methods 82 3% 0% 52
8 Mycology 75 1% 0% 16
9 Biology 26 2% 0% 29
10 Microbiology 22 3% 0% 48

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CELL SIGNAL UNIT 96723 1% 40% 12
2 CNRS FRE 3402 53740 0% 67% 4
3 HELMHOLTZ JR GRP POSTTRANSCRIPT CONTROL GENE 40299 0% 33% 6
4 HIV RNA TRAFFICKING 1 36268 0% 30% 6
5 ERI BIOTECMED 34042 0% 24% 7
6 BIOL CHEM MOL PHARMACOLHEMATOL 26870 0% 67% 2
7 ST PATRICK GRP BASIC ONCOLHOTEL DIEU QUEBEC 26870 0% 67% 2
8 ABORAT PROGRAM GENOME BIOL BIOINFORMAT 20154 0% 100% 1
9 ANDALUZ BIOL MOL MED REGENAT CABIMER 20154 0% 100% 1
10 ARN CGM 20154 0% 100% 1

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 RNA 41139 5% 3% 72
2 MOLECULAR CELL 12360 4% 1% 58
3 WILEY INTERDISCIPLINARY REVIEWS-RNA 12327 1% 4% 15
4 RNA-A PUBLICATION OF THE RNA SOCIETY 9861 2% 2% 25
5 RNA BIOLOGY 9651 1% 2% 21
6 NATURE STRUCTURAL & MOLECULAR BIOLOGY 9500 2% 1% 32
7 BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 6912 1% 2% 19
8 MOLECULAR AND CELLULAR BIOLOGY 5278 5% 0% 77
9 MOLECULAR BIOLOGY OF THE CELL 4011 3% 0% 41
10 NUCLEIC ACIDS RESEARCH 3405 5% 0% 83

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 P BODIES 1069301 6% 57% 93 Search P+BODIES Search P+BODIES
2 STRESS GRANULES 863424 7% 38% 113 Search STRESS+GRANULES Search STRESS+GRANULES
3 DECAPPING 835107 4% 75% 55 Search DECAPPING Search DECAPPING
4 DEADENYLATION 619703 4% 50% 62 Search DEADENYLATION Search DEADENYLATION
5 MRNA DECAY 618990 6% 32% 96 Search MRNA+DECAY Search MRNA+DECAY
6 CCR4 NOT 424101 1% 96% 22 Search CCR4+NOT Search CCR4+NOT
7 DEADENYLASE 400690 2% 76% 26 Search DEADENYLASE Search DEADENYLASE
8 PROCESSING BODIES 347692 2% 51% 34 Search PROCESSING+BODIES Search PROCESSING+BODIES
9 CCR4 NOT COMPLEX 287898 1% 71% 20 Search CCR4+NOT+COMPLEX Search CCR4+NOT+COMPLEX
10 GW182 286689 1% 68% 21 Search GW182 Search GW182

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 JONAS, S , IZAURRALDE, E , (2015) NON-CODING RNA TOWARDS A MOLECULAR UNDERSTANDING OF MICRORNA-MEDIATED GENE SILENCING.NATURE REVIEWS GENETICS. VOL. 16. ISSUE 7. P. 421 -433 85 75% 108
2 DECKER, CJ , PARKER, R , (2012) P-BODIES AND STRESS GRANULES: POSSIBLE ROLES IN THE CONTROL OF TRANSLATION AND MRNA DEGRADATION.COLD SPRING HARBOR PERSPECTIVES IN BIOLOGY. VOL. 4. ISSUE 9. P. - 102 77% 127
3 FRANKS, TM , LYKKE-ANDERSEN, J , (2008) THE CONTROL OF MRNA DECAPPING AND P-BODY FORMATION.MOLECULAR CELL. VOL. 32. ISSUE 5. P. 605-615 99 82% 205
4 JONAS, S , IZAURRALDE, E , (2013) THE ROLE OF DISORDERED PROTEIN REGIONS IN THE ASSEMBLY OF DECAPPING COMPLEXES AND RNP GRANULES.GENES & DEVELOPMENT. VOL. 27. ISSUE 24. P. 2628-2641 82 85% 38
5 JAIN, S , PARKER, R , (2013) THE DISCOVERY AND ANALYSIS OF P BODIES.TEN YEARS OF PROGRESS IN GW/P BODY RESEARCH. VOL. 768. ISSUE . P. 23 -43 100 76% 21
6 ARRIBAS-LAYTON, M , WU, DH , LYKKE-ANDERSEN, J , SONG, HW , (2013) STRUCTURAL AND FUNCTIONAL CONTROL OF THE EUKARYOTIC MRNA DECAPPING MACHINERY.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1829. ISSUE 6-7. P. 580 -589 92 74% 29
7 COLLART, MA , PANASENKO, OO , (2012) THE CCR4-NOT COMPLEX.GENE. VOL. 492. ISSUE 1. P. 42 -53 98 56% 110
8 COLLART, MA , (2016) THE CCR4-NOT COMPLEX IS A KEY REGULATOR OF EUKARYOTIC GENE EXPRESSION.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 7. ISSUE 4. P. 438 -454 69 74% 5
9 WAHLE, E , WINKLER, GS , (2013) RNA DECAY MACHINES: DEADENYLATION BY THE CCR4-NOT AND PAN2-PAN3 COMPLEXES.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1829. ISSUE 6-7. P. 561-570 84 66% 56
10 LING, SHM , QAMRA, R , SONG, HW , (2011) STRUCTURAL AND FUNCTIONAL INSIGHTS INTO EUKARYOTIC MRNA DECAPPING.WILEY INTERDISCIPLINARY REVIEWS-RNA. VOL. 2. ISSUE 2. P. 193-208 100 69% 21

Classes with closest relation at Level 1


Rank Class id link
1 17891 RRP6//MRNP BIOGENESIS METAB//DIS3
2 10335 NMD//UPF1//NONSENSE MEDIATED MRNA DECAY
3 35582 RASGAP//G3BP1//G3BP
4 11961 CYTOPLASMIC POLYADENYLATION//CPEB//POLYA BINDING PROTEIN
5 3617 HUR//AU RICH ELEMENT//TRISTETRAPROLIN
6 24691 BTG2//BTG1//TOB
7 35793 RIBOTAG//S100A10//4SU
8 12218 RNA HELICASE//DEAD BOX PROTEIN//DEAD BOX
9 5071 RNA LOCALIZATION//OSKAR//GERM PLASM
10 3885 EIF4E//EIF4F//CAP ANALOG

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