Class information for:
Level 2: CTCF//CONTROL GENET PROC//NF Y

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
3263 1943 47.8 91%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
0 4 BIOCHEMISTRY & MOLECULAR BIOLOGY//CELL BIOLOGY//ONCOLOGY 4064930
71 3       GENETICS & HEREDITY//CHROMATIN//CELL BIOLOGY 83302
3263 2             CTCF//CONTROL GENET PROC//NF Y 1943
11594 1                   CTCF//CONTROL GENET PROC//SUHW 969
20943 1                   NF Y//CCAAT BOX//NF YB 440
28334 1                   SMAR1//CUTL1//CCAAT DISPLACEMENT PROTEIN 209
30859 1                   GRHL2//GRAINYHEAD//LATE SV40 FACTOR 162
36309 1                   DREF//INSECT BIOMED//DNA REPLICATION RELATED GENE 83
36452 1                   RBBP6//RETINOBLASTOMA BINDING PROTEIN 6//SAFB 80

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CTCF authKW 500262 4% 40% 79
2 CONTROL GENET PROC address 434536 2% 71% 39
3 NF Y authKW 331438 3% 36% 59
4 SUHW authKW 239012 1% 89% 17
5 DREF authKW 232787 1% 74% 20
6 CHROMATIN INSULATOR authKW 224472 1% 71% 20
7 BORIS authKW 206415 1% 77% 17
8 SMAR1 authKW 201130 1% 80% 16
9 CCAAT BOX authKW 198660 2% 41% 31
10 ENHANCER BLOCKING authKW 189686 1% 93% 13

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Cell Biology 8796 35% 0% 679
2 Biochemistry & Molecular Biology 8123 54% 0% 1040
3 Genetics & Heredity 7308 26% 0% 508
4 Developmental Biology 3471 9% 0% 171
5 Biophysics 379 6% 0% 119
6 Oncology 355 9% 0% 176
7 Plant Sciences 45 4% 0% 74
8 Biotechnology & Applied Microbiology 42 4% 0% 69
9 Biology 25 2% 0% 34
10 Mycology 11 0% 0% 9

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 CONTROL GENET PROC 434536 2% 71% 39
2 GENE BIOL 173003 5% 11% 102
3 INSECT BIOMED 97731 1% 22% 28
4 GENE EXP S REGULAT DEV 85550 0% 78% 7
5 GRP TRANSCRIPT REGULAT 65473 0% 83% 5
6 MOL PATHOL SECT 60405 1% 19% 20
7 DROSOPHILA MOL GENET 47141 0% 100% 3
8 MAX BURGER FOR UNGSZENTRUM 45285 0% 41% 7
9 LIA 1066 41901 0% 67% 4
10 CHROMATIN DIS BIOL 35349 0% 38% 6

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 MOLECULAR AND CELLULAR BIOLOGY 9379 6% 1% 116
2 DOKLADY BIOCHEMISTRY AND BIOPHYSICS 7728 1% 2% 21
3 GENETICS 6107 4% 1% 71
4 GENES & DEVELOPMENT 4999 3% 1% 49
5 RUSSIAN JOURNAL OF GENETICS 4950 2% 1% 33
6 BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS 4827 1% 2% 18
7 NUCLEIC ACIDS RESEARCH 3764 5% 0% 99
8 EMBO JOURNAL 2501 3% 0% 53
9 JOURNAL OF BIOLOGICAL CHEMISTRY 2077 8% 0% 148
10 DEVELOPMENT 1730 2% 0% 38

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 CTCF 500262 4% 40% 79 Search CTCF Search CTCF
2 NF Y 331438 3% 36% 59 Search NF+Y Search NF+Y
3 SUHW 239012 1% 89% 17 Search SUHW Search SUHW
4 DREF 232787 1% 74% 20 Search DREF Search DREF
5 CHROMATIN INSULATOR 224472 1% 71% 20 Search CHROMATIN+INSULATOR Search CHROMATIN+INSULATOR
6 BORIS 206415 1% 77% 17 Search BORIS Search BORIS
7 SMAR1 201130 1% 80% 16 Search SMAR1 Search SMAR1
8 CCAAT BOX 198660 2% 41% 31 Search CCAAT+BOX Search CCAAT+BOX
9 ENHANCER BLOCKING 189686 1% 93% 13 Search ENHANCER+BLOCKING Search ENHANCER+BLOCKING
10 GAGA FACTOR 162176 1% 61% 17 Search GAGA+FACTOR Search GAGA+FACTOR

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 KYRCHANOVA, O , GEORGIEV, P , (2014) CHROMATIN INSULATORS AND LONG-DISTANCE INTERACTIONS IN DROSOPHILA.FEBS LETTERS. VOL. 588. ISSUE 1. P. 8-14 91 90% 19
2 MATZAT, LH , LEI, EP , (2014) SURVIVING AN IDENTITY CRISIS: A REVISED VIEW OF CHROMATIN INSULATORS IN THE GENOMICS ERA.BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS. VOL. 1839. ISSUE 3. P. 203-214 102 68% 13
3 WOLLE, D , CLEARD, F , AOKI, T , DESHPANDE, G , SCHEDL, P , KARCH, F , (2015) FUNCTIONAL REQUIREMENTS FOR FAB-7 BOUNDARY ACTIVITY IN THE BITHORAX COMPLEX.MOLECULAR AND CELLULAR BIOLOGY. VOL. 35. ISSUE 21. P. 3739 -3752 74 80% 3
4 CHETVERINA, D , AOKI, T , EROKHIN, M , GEORGIEV, P , SCHEDL, P , (2014) MAKING CONNECTIONS: INSULATORS ORGANIZE EUKARYOTIC CHROMOSOMES INTO INDEPENDENT CIS-REGULATORY NETWORKS.BIOESSAYS. VOL. 36. ISSUE 2. P. 163 -172 72 73% 18
5 KYRCHANOVA, O , MAKSIMENKO, O , STAKHOV, V , IVLIEVA, T , PARSHIKOV, A , STUDITSKY, VM , GEORGIEV, P , (2013) EFFECTIVE BLOCKING OF THE WHITE ENHANCER REQUIRES COOPERATION BETWEEN TWO MAIN MECHANISMS SUGGESTED FOR THE INSULATOR FUNCTION.PLOS GENETICS. VOL. 9. ISSUE 7. P. - 67 86% 8
6 KYRCHANOVA, O , MOGILA, V , WOLLE, D , DESHPANDE, G , PARSHIKOV, A , CLEARD, F , KARCH, F , SCHEDL, P , GEORGIEV, P , (2016) FUNCTIONAL DISSECTION OF THE BLOCKING AND BYPASS ACTIVITIES OF THE FAB-8 BOUNDARY IN THE DROSOPHILA BITHORAX COMPLEX.PLOS GENETICS. VOL. 12. ISSUE 7. P. - 68 83% 0
7 MAKSIMENKO, OG , CHETVERINA, DA , GEORGIEV, PG , (2006) INSULATORS OF HIGHER EUKARYOTES: PROPERTIES, MECHANISMS OF ACTION, AND ROLE IN TRANSCRIPTIONAL REGULATION.RUSSIAN JOURNAL OF GENETICS. VOL. 42. ISSUE 8. P. 845-857 82 83% 6
8 MAKSIMENKO, O , BARTKUHN, M , STAKHOV, V , HEROLD, M , ZOLOTAREV, N , JOX, T , BUXA, MK , KIRSCH, R , BONCHUK, A , FEDOTOVA, A , ET AL (2015) TWO NEW INSULATOR PROTEINS, PITA AND ZIPIC, TARGET CP190 TO CHROMATIN.GENOME RESEARCH. VOL. 25. ISSUE 1. P. 89 -99 49 86% 14
9 MAKSIMENKO, O , GEORGIEV, P , (2014) MECHANISMS AND PROTEINS INVOLVED IN LONG-DISTANCE INTERACTIONS.FRONTIERS IN GENETICS. VOL. 5. ISSUE . P. - 94 47% 17
10 KYRCHANOVA, O , CHETVERINA, D , MAKSIMENKO, O , KULLYEV, A , GEORGIEV, P , (2008) ORIENTATION-DEPENDENT INTERACTION BETWEEN DROSOPHILA INSULATORS IS A PROPERTY OF THIS CLASS OF REGULATORY ELEMENTS.NUCLEIC ACIDS RESEARCH. VOL. 36. ISSUE 22. P. 7019 -7028 60 91% 25

Classes with closest relation at Level 2


Rank Class id link
1 3084 CHROMOSOME TERRITORY//NUCLEAR ARCHITECTURE//NUCLEAR ORGANIZATION
2 1227 TRANSPOSABLE ELEMENTS//RETROTRANSPOSON//CHROMOSOMA
3 2439 GENOMIC IMPRINTING//BECKWITH WIEDEMANN SYNDROME//SILVER RUSSELL SYNDROME
4 2504 TFIID//RNA POLYMERASE II//MEDIATOR COMPLEX
5 343 EZH2//CHROMATIN//POLYCOMB
6 1216 PU1//ETS 1//GATA 1
7 253 DROSOPHILA//DEVELOPMENTAL BIOLOGY//DEVELOPMENT
8 1094 NUCLEAR MATRIX//LINKER HISTONE//HISTONE H1
9 3833 CITED2//BRANCHIO OCULO FACIAL SYNDROME//AP 2 ALPHA
10 3425 YB 1//COLD SHOCK PROTEIN//Y BOX BINDING PROTEIN 1

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