Class information for:
Level 2: RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
371 17271 43.6 76%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
371 2             RNA POLYMERASE//HFQ//JOURNAL OF BACTERIOLOGY 17271
3302 1                   RNA POLYMERASE//TRANSCRIPTION TERMINATION//NUSG 2016
5558 1                   RNA POLYMERASE//ESCHERICHIA COLI RNA POLYMERASE//SIGMA70 1606
6760 1                   RNASE E//POLYNUCLEOTIDE PHOSPHORYLASE//RNA DEGRADOSOME 1447
7121 1                   HFQ//SRNA//RYHB 1403
8170 1                   PLASMID//REPLICATION CONTROL//PLASMID R6K 1283
8709 1                   H NS//HISTONE LIKE PROTEIN//NUCLEOID ASSOCIATED PROTEIN 1226
8862 1                   ORIC//DNAA//DNAA PROTEIN 1210
9543 1                   SHINE DALGARNO SEQUENCE//LEADERLESS MRNA//TRANSLATION INITIATION 1145
9979 1                   DNA SEGREGATION//FTSK//PARB 1102
10566 1                   TOXIN ANTITOXIN SYSTEM//TOXIN ANTITOXIN//POST SEGREGATIONAL KILLING 1053
13204 1                   PPGPP//STRINGENT RESPONSE//PPPGPP 854
13486 1                   RPOS//CURLI//UVI31 833
16075 1                   HRCA//CIRCE//SIGMA32 674
21689 1                   OBG//RBFA//DRG2 409
23884 1                   RIBOSOMAL PROTEIN L1//RPMG//L1 CONFORMATIONS 331
24380 1                   BACTERIOPHAGE LAMBDA DEVELOPMENT//LAMBDA PLASMIDS//COLIPHAGE LAMBDA 314
24529 1                   AIST TSUKUBA 6 10//LEUCINE RESPONSIVE REGULATORY PROTEIN//FFRP 309
37492 1                   UNIVERSAL STRESS PROTEIN//MJ0577//1JMV 56

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 RNA POLYMERASE authKW 285263 3% 37% 437
2 HFQ authKW 224445 1% 86% 147
3 JOURNAL OF BACTERIOLOGY journal 210917 12% 6% 1994
4 RNASE E authKW 173386 1% 90% 109
5 MOLECULAR MICROBIOLOGY journal 171009 6% 9% 1075
6 SRNA authKW 124085 1% 69% 102
7 MICROBIOLOGY WoSSC 116687 35% 1% 5991
8 TOXIN ANTITOXIN SYSTEM authKW 115839 0% 81% 81
9 DNAA authKW 104613 0% 74% 80
10 H NS authKW 96690 0% 64% 86

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Microbiology 116687 35% 1% 5991
2 Biochemistry & Molecular Biology 90622 59% 1% 10242
3 Genetics & Heredity 11383 12% 0% 2051
4 Cell Biology 6163 11% 0% 1986
5 Biophysics 4214 7% 0% 1158
6 Biotechnology & Applied Microbiology 1206 5% 0% 874
7 Biochemical Research Methods 793 3% 0% 561
8 Biology 521 2% 0% 395
9 Developmental Biology 140 1% 0% 166
10 Mathematical & Computational Biology 115 1% 0% 138

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 UPR 9073 58213 0% 50% 66
2 GENE REGULAT CHROMOSOME BIOL 34097 0% 29% 66
3 MICROBIOL GENET MOL 32794 1% 20% 91
4 RNA BIOL GRP 32655 0% 49% 38
5 WAKSMAN 28427 1% 15% 108
6 ANTIMICROBIAL DISCOVERY 25378 0% 55% 26
7 PHYSIOL BACTERIENNE 23371 0% 88% 15
8 BACTERIAL CELL BIOL 23110 0% 22% 60
9 AG BAKTERIENGENET 22475 0% 58% 22
10 BIOL MCA 19768 0% 39% 29

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 JOURNAL OF BACTERIOLOGY 210917 12% 6% 1994
2 MOLECULAR MICROBIOLOGY 171009 6% 9% 1075
3 PLASMID 72454 2% 14% 289
4 JOURNAL OF MOLECULAR BIOLOGY 62139 5% 4% 913
5 NUCLEIC ACIDS RESEARCH 42590 6% 3% 990
6 MOLECULAR AND GENERAL GENETICS 30910 2% 6% 292
7 MOLECULAR & GENERAL GENETICS 24874 1% 8% 186
8 RNA BIOLOGY 21047 1% 11% 105
9 EMBO JOURNAL 14869 2% 2% 387
10 MICROBIOLOGY-SGM 13682 1% 3% 250

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 RNA POLYMERASE 285263 3% 37% 437 Search RNA+POLYMERASE Search RNA+POLYMERASE
2 HFQ 224445 1% 86% 147 Search HFQ Search HFQ
3 RNASE E 173386 1% 90% 109 Search RNASE+E Search RNASE+E
4 SRNA 124085 1% 69% 102 Search SRNA Search SRNA
5 TOXIN ANTITOXIN SYSTEM 115839 0% 81% 81 Search TOXIN+ANTITOXIN+SYSTEM Search TOXIN+ANTITOXIN+SYSTEM
6 DNAA 104613 0% 74% 80 Search DNAA Search DNAA
7 H NS 96690 0% 64% 86 Search H+NS Search H+NS
8 ORIC 96045 0% 80% 68 Search ORIC Search ORIC
9 RPOS 95449 1% 44% 122 Search RPOS Search RPOS
10 PPGPP 93356 0% 66% 80 Search PPGPP Search PPGPP

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 WAGNER, EGH , ROMBY, P , (2015) SMALL RNAS IN BACTERIA AND ARCHAEA: WHO THEY ARE, WHAT THEY DO, AND HOW THEY DO IT.ADVANCES IN GENETICS, VOL 90. VOL. 90. ISSUE . P. 133 -208 313 82% 35
2 ARRAIANO, CM , ANDRADE, JM , DOMINGUES, S , GUINOTE, IB , MALECKI, M , MATOS, RG , MOREIRA, RN , POBRE, V , REIS, FP , SARAMAGO, M , ET AL (2010) THE CRITICAL ROLE OF RNA PROCESSING AND DEGRADATION IN THE CONTROL OF GENE EXPRESSION.FEMS MICROBIOLOGY REVIEWS. VOL. 34. ISSUE 5. P. 883 -923 313 71% 116
3 LAALAMI, S , ZIG, L , PUTZER, H , (2014) INITIATION OF MRNA DECAY IN BACTERIA.CELLULAR AND MOLECULAR LIFE SCIENCES. VOL. 71. ISSUE 10. P. 1799 -1828 249 86% 23
4 HAYES, F , VAN MELDEREN, L , (2011) TOXINS-ANTITOXINS: DIVERSITY, EVOLUTION AND FUNCTION.CRITICAL REVIEWS IN BIOCHEMISTRY AND MOLECULAR BIOLOGY. VOL. 46. ISSUE 5. P. 386 -408 208 90% 78
5 VOGEL, J , LUISI, BF , (2011) HFQ AND ITS CONSTELLATION OF RNA.NATURE REVIEWS MICROBIOLOGY. VOL. 9. ISSUE 8. P. 578 -589 127 87% 317
6 REGNIER, P , HAJNSDORF, E , (2009) POLY(A)-ASSISTED RNA DECAY AND MODULATORS OF RNA STABILITY.MOLECULAR BIOLOGY OF RNA PROCESSING AND DECAY IN PROKARYOTES. VOL. 85. ISSUE . P. 137 -185 246 82% 31
7 GOEDERS, N , VAN MELDEREN, L , (2014) TOXIN-ANTITOXIN SYSTEMS AS MULTILEVEL INTERACTION SYSTEMS.TOXINS. VOL. 6. ISSUE 1. P. 304 -324 122 98% 55
8 KEDZIERSKA, B , HAYES, F , (2016) EMERGING ROLES OF TOXIN-ANTITOXIN MODULES IN BACTERIAL PATHOGENESIS.MOLECULES. VOL. 21. ISSUE 6. P. - 164 85% 2
9 SOBRERO, P , VALVERDE, C , (2012) THE BACTERIAL PROTEIN HFQ: MUCH MORE THAN A MERE RNA-BINDING FACTOR.CRITICAL REVIEWS IN MICROBIOLOGY. VOL. 38. ISSUE 4. P. 276-299 169 87% 44
10 PAGE, R , PETI, W , (2016) TOXIN-ANTITOXIN SYSTEMS IN BACTERIAL GROWTH ARREST AND PERSISTENCE.NATURE CHEMICAL BIOLOGY. VOL. 12. ISSUE 4. P. 208 -214 85 89% 20

Classes with closest relation at Level 2


Rank Class id link
1 2350 BACILLUS SUBTILIS//SPORULATION//JOURNAL OF BACTERIOLOGY
2 3063 DNA TRANSPOSITION//PHAGE MU//TRANSPOSASE
3 2025 FTSZ//PEPTIDOGLYCAN//BACTERIAL CELL DIVISION
4 1297 RIBOSOME//TRANSLATION TERMINATION//TMRNA
5 804 JOURNAL OF BACTERIOLOGY//PHOSPHOTRANSFERASE SYSTEM//PERIPLASMIC BINDING PROTEIN
6 2504 TFIID//RNA POLYMERASE II//MEDIATOR COMPLEX
7 3425 YB 1//COLD SHOCK PROTEIN//Y BOX BINDING PROTEIN 1
8 2608 CROWN GALL//TI PLASMID//BACTERIAL CONJUGATION
9 959 BACTERIOPHAGE//PHAGE THERAPY//ENDOLYSIN
10 1609 RESTRICTION ENDONUCLEASE//BIOTECHNIQUES//RESTRICTION MODIFICATION SYSTEM

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