Class information for:
Level 2: PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA

Basic class information
Class id #P Avg. number of
references		 Database coverage
of references
892 11392 45.3 82%


Bar chart of Publication_year

Last years might be incomplete

Hierarchy of classes
The table includes all classes above and classes immediately below the current class.


Cluster id Level Cluster label #P
7 4 INFECTIOUS DISEASES//MICROBIOLOGY//VIROLOGY 1353914
33 3       JOURNAL OF BACTERIOLOGY//MICROBIOLOGY//MOLECULAR MICROBIOLOGY 107033
892 2             PROTEIN TRANSLOCATION//PROTEIN IMPORT//SECA 11392
2349 1                   SECA//SECB//SECYEG 2274
2667 1                   PROTEIN IMPORT//TOM COMPLEX//MITOCHONDRIAL PROTEIN IMPORT 2179
4955 1                   SIGNAL RECOGNITION PARTICLE//TRANSLOCON//FFH 1697
5827 1                   PORIN//MALTOPORIN//OUTER MEMBRANE PROTEIN 1570
9219 1                   CHLOROPLAST PROTEIN IMPORT//PROTEIN IMPORT//CHLOROPLAST 1176
12801 1                   AUTOTRANSPORTER//AUTODISPLAY//BAM COMPLEX 880
15103 1                   HTRA1//HTRA//HTRA2 731
15877 1                   TWIN ARGININE TRANSLOCATION//TAT PATHWAY//TWIN ARGININE 686
28802 1                   LOLB//LOLA//LOL SYSTEM 199

Terms with highest relevance score


rank Term termType Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 PROTEIN TRANSLOCATION authKW 528472 3% 60% 328
2 PROTEIN IMPORT authKW 451311 3% 59% 288
3 SECA authKW 292417 1% 82% 133
4 SIGNAL RECOGNITION PARTICLE authKW 291593 1% 78% 140
5 PORIN authKW 205687 2% 36% 211
6 PROTEIN TRANSPORT authKW 174323 2% 38% 172
7 AUTOTRANSPORTER authKW 169678 1% 71% 89
8 TRANSLOCON authKW 147665 1% 65% 85
9 PROTEIN TARGETING authKW 123793 1% 29% 159
10 TWIN ARGININE TRANSLOCATION authKW 122212 0% 89% 51

Web of Science journal categories


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 Biochemistry & Molecular Biology 68382 63% 0% 7182
2 Cell Biology 26056 26% 0% 2907
3 Microbiology 17975 18% 0% 2005
4 Biophysics 11667 12% 0% 1418
5 Plant Sciences 1050 6% 0% 664
6 Biochemical Research Methods 587 3% 0% 385
7 Biotechnology & Applied Microbiology 288 4% 0% 422
8 Genetics & Heredity 181 3% 0% 364
9 Biology 140 2% 0% 198
10 Developmental Biology 12 1% 0% 68

Address terms


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class
1 ZBMZ 113086 1% 50% 84
2 ZENTRUM BIOCHEM MOL ZELLFOR 38809 0% 50% 29
3 FAK BIOL 24836 1% 9% 108
4 CANADA CHAIR BACTERIAL ANIM DIS 24348 0% 91% 10
5 GENET BIOCHEM BRANCH 21960 0% 21% 39
6 MOL MICROBIOL 21414 2% 4% 225
7 GRONINGEN BIOMOL SCI BIOTECHNOL 18196 1% 6% 113
8 MEMBRANE PROTE 15719 0% 28% 21
9 FB BIOL GEOG 15490 0% 64% 9
10 BIOCHEM HERMANN HERDER STR 7 14280 0% 67% 8

Journals


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with term
in class
1 JOURNAL OF BACTERIOLOGY 39440 6% 2% 706
2 JOURNAL OF BIOLOGICAL CHEMISTRY 33030 12% 1% 1394
3 EMBO JOURNAL 21627 3% 2% 376
4 MOLECULAR MICROBIOLOGY 14609 2% 2% 258
5 FEBS LETTERS 10643 4% 1% 413
6 JOURNAL OF CELL BIOLOGY 10371 2% 2% 253
7 JOURNAL OF MOLECULAR BIOLOGY 9809 3% 1% 299
8 CELL 5824 2% 1% 185
9 BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH 5517 1% 2% 98
10 EUROPEAN JOURNAL OF BIOCHEMISTRY 4831 2% 1% 195

Author Key Words


Rank Term Chi square Shr. of publ. in
class containing
term		 Class's shr. of
term's tot. occurrences		 #P with
term in
class		 LCSH search Wikipedia search
1 PROTEIN TRANSLOCATION 528472 3% 60% 328 Search PROTEIN+TRANSLOCATION Search PROTEIN+TRANSLOCATION
2 PROTEIN IMPORT 451311 3% 59% 288 Search PROTEIN+IMPORT Search PROTEIN+IMPORT
3 SECA 292417 1% 82% 133 Search SECA Search SECA
4 SIGNAL RECOGNITION PARTICLE 291593 1% 78% 140 Search SIGNAL+RECOGNITION+PARTICLE Search SIGNAL+RECOGNITION+PARTICLE
5 PORIN 205687 2% 36% 211 Search PORIN Search PORIN
6 PROTEIN TRANSPORT 174323 2% 38% 172 Search PROTEIN+TRANSPORT Search PROTEIN+TRANSPORT
7 AUTOTRANSPORTER 169678 1% 71% 89 Search AUTOTRANSPORTER Search AUTOTRANSPORTER
8 TRANSLOCON 147665 1% 65% 85 Search TRANSLOCON Search TRANSLOCON
9 PROTEIN TARGETING 123793 1% 29% 159 Search PROTEIN+TARGETING Search PROTEIN+TARGETING
10 TWIN ARGININE TRANSLOCATION 122212 0% 89% 51 Search TWIN+ARGININE+TRANSLOCATION Search TWIN+ARGININE+TRANSLOCATION

Core articles
The table includes core articles in the class. The following variables is taken into account for the relevance score of an article in a cluster c:
(1) Number of references referring to publications in the class.
(2) Share of total number of active references referring to publications in the class.
(3) Age of the article. New articles get higher score than old articles.
(4) Citation rate, normalized to year.


Rank Reference # ref. in
cl.		 Shr. of ref. in
cl.		 Citations
1 KUDVA, R , DENKS, K , KUHN, P , VOGT, A , MULLER, M , KOCH, HG , (2013) PROTEIN TRANSLOCATION ACROSS THE INNER MEMBRANE OF GRAM-NEGATIVE BACTERIA: THE SEC AND TAT DEPENDENT PROTEIN TRANSPORT PATHWAYS.RESEARCH IN MICROBIOLOGY. VOL. 164. ISSUE 6. P. 505 -534 357 94% 39
2 DENKS, K , VOGT, A , SACHELARU, I , PETRIMAN, NA , KUDVA, R , KOCH, HG , (2014) THE SEC TRANSLOCON MEDIATED PROTEIN TRANSPORT IN PROKARYOTES AND EUKARYOTES.MOLECULAR MEMBRANE BIOLOGY. VOL. 31. ISSUE 2-3. P. 58 -84 342 84% 28
3 AKOPIAN, D , SHEN, K , ZHANG, X , SHAN, SO , (2013) SIGNAL RECOGNITION PARTICLE: AN ESSENTIAL PROTEIN-TARGETING MACHINE.ANNUAL REVIEW OF BIOCHEMISTRY, VOL 82. VOL. 82. ISSUE . P. 693-721 205 94% 90
4 NEUPERT, W , (1997) PROTEIN IMPORT INTO MITOCHONDRIA.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 66. ISSUE . P. 863-917 320 68% 831
5 DU PLESSIS, DJF , NOUWEN, N , DRIESSEN, AJM , (2011) THE SEC TRANSLOCASE.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1808. ISSUE 3. P. 851-865 229 90% 115
6 NATALE, P , BRUSER, T , DRIESSEN, AJM , (2008) SEC- AND TAT-MEDIATED PROTEIN SECRETION ACROSS THE BACTERIAL CYTOPLASMIC MEMBRANE - DISTINCT TRANSLOCASES AND MECHANISMS.BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES. VOL. 1778. ISSUE 9. P. 1735-1756 245 90% 156
7 PUGSLEY, AP , (1993) THE COMPLETE GENERAL SECRETORY PATHWAY IN GRAM-NEGATIVE BACTERIA.MICROBIOLOGICAL REVIEWS. VOL. 57. ISSUE 1. P. 50 -108 328 58% 1544
8 SHI, LX , THEG, SM , (2013) THE CHLOROPLAST PROTEIN IMPORT SYSTEM: FROM ALGAE TO TREES.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1833. ISSUE 2. P. 314-331 193 89% 54
9 NEUPERT, W , HERRMANN, JM , (2007) TRANSLOCATION OF PROTEINS INTO MITOCHONDRIA.ANNUAL REVIEW OF BIOCHEMISTRY. VOL. 76. ISSUE . P. 723 -749 154 83% 681
10 HOHR, AIC , STRAUB, SP , WARSCHEID, B , BECKER, T , WIEDEMANN, N , (2015) ASSEMBLY OF BETA-BARREL PROTEINS IN THE MITOCHONDRIAL OUTER MEMBRANE.BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH. VOL. 1853. ISSUE 1. P. 74 -88 219 81% 12

Classes with closest relation at Level 2


Rank Class id link
1 3350 VDAC//VOLTAGE DEPENDENT ANION CHANNEL//HEXOKINASE
2 2350 BACILLUS SUBTILIS//SPORULATION//JOURNAL OF BACTERIOLOGY
3 1297 RIBOSOME//TRANSLATION TERMINATION//TMRNA
4 804 JOURNAL OF BACTERIOLOGY//PHOSPHOTRANSFERASE SYSTEM//PERIPLASMIC BINDING PROTEIN
5 1177 CYTOCHROME C OXIDASE//COMPLEX I//BIOCHIMICA ET BIOPHYSICA ACTA-BIOENERGETICS
6 1324 PROTOCHLOROPHYLLIDE//CHLOROPHYLL BIOSYNTHESIS//PLASTID TRANSFORMATION
7 1409 SIDEROPHORE//COLICIN//PYOVERDIN
8 2023 ATP SYNTHASE//F 1 ATPASE//MITOCHONDRIAL CARRIER
9 1548 UNFOLDED PROTEIN RESPONSE//ENDOPLASMIC RETICULUM STRESS//ER STRESS
10 2025 FTSZ//PEPTIDOGLYCAN//BACTERIAL CELL DIVISION

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